Sorex araneus (European shrew): 101543552 Help Entry 101543552         CDS       T07854                                  Symbol CIITA Name (RefSeq) MHC class II transactivator   KO K08060   MHC class II transactivator [EC:2.7.11.1] Organism sara  Sorex araneus (European shrew) Pathway sara04612   Antigen processing and presentation sara05145   Toxoplasmosis sara05152   Tuberculosis sara05164   Influenza A sara05340   Primary immunodeficiency Brite KEGG Orthology (KO) [BR:sara00001]  09150 Organismal Systems   09151 Immune system    04612 Antigen processing and presentation     101543552 (CIITA)  09160 Human Diseases   09172 Infectious disease: viral    05164 Influenza A     101543552 (CIITA)   09171 Infectious disease: bacterial    05152 Tuberculosis     101543552 (CIITA)   09174 Infectious disease: parasitic    05145 Toxoplasmosis     101543552 (CIITA)   09163 Immune disease    05340 Primary immunodeficiency     101543552 (CIITA)  09180 Brite Hierarchies   09181 Protein families: metabolism    01001 Protein kinases [BR:sara01001]     101543552 (CIITA)   09183 Protein families: signaling and cellular processes    04054 Pattern recognition receptors [BR:sara04054]     101543552 (CIITA) Enzymes [BR:sara01000]  2. Transferases   2.7  Transferring phosphorus-containing groups    2.7.11  Protein-serine/threonine kinases     2.7.11.1  non-specific serine/threonine protein kinase      101543552 (CIITA) Protein kinases [BR:sara01001]  Serine/threonine kinases: Other   TAF1 family    101543552 (CIITA) Pattern recognition receptors [BR:sara04054]  Cytoplasmic pattern recognition receptors   NOD-like receptors    101543552 (CIITA) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  NACHT LRR_6 LRR_4 NLRC4_HD2 LRR_8 Motif Other DBs NCBI-GeneID:  101543552 NCBI-ProteinID:  XP_004604398 LinkDB All DBs Position Unknown AA seq 1140 aa AA seqDB search MDRFQAILPLVRALLSGPEPSPARTLLDRLLEEHLLSREYHRTLTQERDREALARKIALT LLGEPDPDVALLGWACSEGQQAPGAERGPGDQGQAEKVKEIKCHGRRGEVGVPEGPRPST QGAGSRREKERTVHPGSSAAGPGRPPAGMGQGVAELEDPGGRARSGQCTAMELGALEGGY LELLNSNADPLQLYHLCDYLDLAGEETDVCSEPDKDTINCEQLHRLFCDIEDDEETREAY NSIADLDSYVFQDSQPDSWSRDAFSKHMGMEDSLGESGKAPEEAGQRGPKRPCPEEALPE DPKHRKLGPASLGPASPSLRRPRLPRPSPRQAGLSHAEMSLTPLTAEPPAVPVPELLPQP PLVPPGLLSEEPTSRQSPQEAVLVPAGPLQLIPAMPQTLWQISAPGAGTPGILIYQKSVE RFQRSLRDKYQAEPLGPEDFLVEVDLVRAQLERSSIKSQERELAVLDWTERRPARGGLAA ILLAPGARRRPQDTQVIAVLGRAGQGKSLWVRSVTRAWAGGQLPQYDFVFLLRGHCVDRL GDPCRLQDLLSLAAAGPLDAEVLAHVLRQPHRVLLILDAFEELEAQDGTPHGAGGHAWTE PCSPRALLAGLFQRKLLRGCTVLLAARPRGRLALSLGKADALFEVAGFSARQAEAYVRRH WERLDRPELQDEALRLLHAHPFLLGHCRTPAACRAVRALEDLARLAWELGRQHHSTLQAG QVPSAELRAWAGAAGLLRPVPDSGEAELAFPSFLLQCFLAAVWLARSPQVKDKELPQYLA LTPRKKRPYDNWLEAVPRFLAGLVFRPPALAALVGPVAAAVSSRKQKMLSRYLRRLQPGL LPAGRLLELLHCAHEAEDPGIWQHALHGLPAHLCFPGTRLAPPDVHVLARALEAAGRDFA LDVRSTGIDPPGLATLVGLSCVSSVRAALSDAVGLWRSLWPQGQSGLLQAAKDKLTIQPF KAESQKDVEDLRDLVQLQRARGTPGDAVFGELPAVRDLRKLEFALGPVLGPRAFPTLAGI LEAFSSLQHLDLSQNSITDVGACKLAEALPALATSLLRLSLYNNCISDKGAQSLAHVLPE MGTLQELDVQYNKFTASGAQRLAASLRKSPQVKRLALWTPTIPFGVQEHLQLLDSRISLR NT seq 3423 nt NT seq  +upstreamnt  +downstreamnt atggaccgcttccaggccatcctgcccctggtgcgggcgctgctgtcggggcccgagccc agcccggcgcggaccctcctggaccggctgctggaggagcacctgctgtccagggagtac caccgcacgctgacgcaggagcgcgaccgcgaggcgctggccaggaagatcgccctgacc ctgctgggcgagcctgaccccgacgtggccctcctggggtgggcctgcagcgaggggcag caggctcccggggcggagcggggcccgggcgaccagggccaggctgagaaagtgaaagag ataaagtgccacgggcggcgaggcgaggtgggggttcccgagggcccgcggccgagcacc cagggcgcggggagccggcgggagaaggagaggaccgtgcaccccgggagcagcgccgct gggcctggccggcccccggcaggcatgggccagggggttgctgagctggaggaccctggc ggccgggcacgctctgggcagtgcaccgccatggagctgggggccctggaaggcggctac ctggagctcctcaacagcaacgccgaccctctgcagctgtaccacctctgtgactacctg gacctggcgggagaggagaccgacgtctgctcagagcccgacaaggacaccatcaactgt gaacagctccacaggctcttctgtgacatagaggatgacgaagagaccagggaagcttat aacagtatcgcggacctggattcctacgtcttccaggactcccagccggacagctggagc agagacgctttcagcaaacacatgggcatggaagacagcctgggagagagcgggaaggcc ccggaggaggccgggcagaggggcccaaagagaccctgccccgaggaagcgctgcccgaa gaccccaagcaccggaagctgggccccgcctccctaggccccgcctccccgagcctccgc cggccccgcctcccccggccctcccccaggcaggccggcctgtctcatgcagagatgtct ctgacccccctcacagctgagccacccgcggtgccagtccccgagctcctgccccagccc cccctggtcccgcccggcctgctgagcgaggagcccacatctcgccagagcccgcaggag gccgtcctggtgccagccggaccccttcagctcatccccgcgatgccccagacgctctgg cagatctccgcgcccggagcaggcacccccggcatcctcatctaccagaagagtgtggag cggttccagcgctcactgcgggacaagtaccaggccgagcccctgggcccggaggacttc ctggtggaggtggacctggtgagggcacagctggagaggagcagcatcaagagccaggag cgggagctggccgtcctggactggacagagcggcggccggcccgcggggggctggcggct atcctgctggcccccggggcccgccggcggccccaggacacgcaggtcatcgccgtgctg ggcagggccggccaggggaagagcctgtgggtgcggagcgtgacccgcgcctgggccggc ggccagctgccccagtacgacttcgtcttcctcctccgtggccactgcgtggatcgtctg ggggacccctgccgcctgcaggacctgctgtccctcgcggccgcggggccgctggacgcc gaggtcctggcccacgtcctgaggcagccgcaccgcgtcctgctcatcttggacgcgttc gaagagctggaagcccaggacgggaccccccacggggcgggcggacacgcgtggacggag ccctgctccccgcgggccctgctggccggcctcttccagcgcaagctgctgcgcggctgc accgtgctcctggccgcccggccccgcggccgcctggccctcagcctcggcaaggccgac gccctgttcgaggtggccggcttctcggcccggcaggccgaggcctatgtgcggcgccac tgggagcgcctggacaggcccgagctccaggacgaggccctgcggctccttcacgctcac cccttcctgctcggccactgccgcacccctgcggcgtgccgggccgtaagggccctggag gacctggccaggctggcctgggagctgggccgccagcatcacagcaccctgcaggccggc caggtcccgtccgccgagctgagggcctgggcgggggccgcggggctgctgcggcccgtg ccggactccggggaggccgagctggccttccccagcttcctcctgcagtgcttcctggcg gccgtgtggctggcccggagcccccaggtcaaggacaaggagctgccgcagtacctggcc ctgaccccgaggaagaaacggccctacgacaattggctggaggccgtgccccgattcctg gccgggctggtcttccggccgcccgccctggcggccctggtggggcccgtggcggccgcc gtgagcagccggaagcagaagatgctgagccggtacctgaggcggctgcagccgggcctg ctgcctgccgggcggctcctggagctgctgcactgcgcccacgaggccgaggaccccggc atttggcagcacgcgctgcacgggctccccgcccacctctgcttcccgggcacccgcctc gcgccccctgacgtgcacgtgctggcccgcgccctggaggccgccggccgcgacttcgcc ctggacgtccgcagcacgggcatcgacccccccggcctggccaccctcgtgggactcagc tgcgtctcctccgtcagggctgccttgagcgacgcggtggggctgtggcggtcgctgtgg ccgcaggggcagtcggggctgctgcaggcggctaaggacaagctcaccatccagcccttc aaggccgagtcccagaaggacgtggaggacctgagggacctggtgcagctgcagagggcc agggggacccccggggacgccgtgttcggggagctcccggccgtccgggacctgaggaag ctggagtttgcgctgggccccgtgctgggcccccgggccttccccacgctggccgggatc ctggaggccttctcctccctgcagcacctggacctgtcccagaacagcatcactgacgtg ggcgcctgcaagctggccgaggcgctgcccgccctggccacctcccttctcagactgagc ttgtacaacaactgcatcagcgacaagggcgcccagagcctggcccacgtgctgcccgag atggggaccctgcaggagctggacgtccagtacaacaagttcacggcgtcgggcgcgcag cggctggccgccagcctgaggaagagcccgcaggtgaagaggctggcgctgtggaccccc accatccccttcggcgtccaggagcacttgcagctgctcgactcccggatcagcctgagg tga

DBGET integrated database retrieval system