Sorex araneus (European shrew): 101543561
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Entry
101543561 CDS
T07854
Symbol
CHD5
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 5
KO
K14435
chromodomain-helicase-DNA-binding protein 5 [EC:5.6.2.-]
Organism
sara
Sorex araneus (European shrew)
Brite
KEGG Orthology (KO) [BR:
sara00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
sara03036
]
101543561 (CHD5)
Chromosome and associated proteins [BR:
sara03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
101543561 (CHD5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
CHDCT2
CHDII_SANT-like
Helicase_C
CHDNT
PHD
DUF1087
PHD-1st_NSD
ResIII
HDA2-3
PHDvar_NSD
HTH_CHD1_Hrp3
DEAD
Chromo
PHD_2
AAA_22
Motif
Other DBs
NCBI-GeneID:
101543561
NCBI-ProteinID:
XP_012787860
LinkDB
All DBs
Position
Unknown
AA seq
1959 aa
AA seq
DB search
MRLSSRYVIKGYCEGRGRGLWNAQVTVPAPDTLPMPGTAQAAPVQGPSSPARAMPPGPAP
SPSRLALAVWRRAQEVPSTVLPSALTLCPSSGRDPGLVLLTAGLESIAQQEEEDGVLGGF
EEFFAEEPVSLPKKKKARKPKESRPKGKRRKKEGSNDELSENEEVPGGKSESEGSDYSPT
KKKKKKLKEKKEKKAKRRKKEEEEEDGEDGGLKEPKSSGQLMAEWGLDDVDYLFSEEDYR
TLTNYKAFSQFLRPLIARKNPKIPMSKMMTVLGAKWREFSANNPFKGSSAAAAAAAVAAA
VETVTIAPPLAISPQQPPQPVPIRKAKTKEGKGPGVRKKIKGSKDAKKKGKKKAQALRLR
LGGAGGKRKKGSSSEEDERDESDLDSASVHSASMRSECSAALGKKNKRRRKKKRMDDGDG
YETDHQDYCEVCQQGGEIILCDTCPRAYHLVCLDPELEKAPEGKWSCPHCEKEGIQWEPK
DEDDEEEEGGGEEEEDDHMEFCRVCKDGGELLCCDACPSSYHLHCLNPPLPEIPNGEWLC
PRCTCPPLKGKVQRILHWRWTEPPAPFMVGLPGPDVEPGGPPPKALEGLPEREFFVKWAG
LSYWHCSWVKELQLELYHTVMYRNYQRKNDMDEPPPFDYGSGDEDGKRKSKDPVQARMEE
RFYRYGVKPEWMLVHRILTPSPLSPLPLPRLTDPCPPRELMLGEDNRLPKKLAKKGKKLK
DEKQEKPPDTPIVDPTVKFDKQPWYIDATGGTLHPYQLEGLNWLRFSWAQGTDTILADEM
GLGKTVQTIVFLYSLYKEGHSKGPYLVSAPLSTIINWEREFEMWAPDFYVVTYTGDKESR
SVIRENEFSFEDNAVRSGKKVFRMKKEVQIKFHVLLTSYELITIDQAVLGSIEWACLVVD
EAHRLKNNQSKFFRVLNSYKIDYKLLLTGTPLQNNLEELFHLLNFLTPERFNNLEGFLEE
FADISKEDQIKKLHDLLGPHMLRRLKADVFKNMPAKTELIVRVELSQMQKKYYKFILTRN
FEALNSKGGGNQVSLLNIMMDLKKCCNHPYLFPVAAVEAPVLPNGSYDGGSLVRSSGKLM
LLQKMLKRLRDEGHRVLIFSQMTKMLDLLEDFLEYEGYKYERIDGGITGGLRQEAIDRFN
APGAQQFCFLLSTRAGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQNKKVMIYR
FVTRASVEERITQVAKRKMMLTHLVVRPGLGSKSGSMTKQELDDILKFGTEELFKDDVEG
MVQGQRPVTPIPDVQSSKGGALAASAKKKHGSTPPGDNKDVEDSSVIHYDDAAISKLLDR
NQDATDDTELQNMNEYLSSFKVAQYVVREEDGVEEVEREIIKQEENVDPDYWEKLLRHHY
EQQQEDLARNLGKGKRIRKQVNYNDATQEDQGARARRRRRLRLQPGVLGFNARQRKAFLN
AIMRWGMPPQDAFNSHWLVRDLRGKSEKEFRAYVSLFMRHLCEPGADGAESFADGVPREG
LSRQHVLTRIGVMSLVRKKVQEFEHVNGKYSTPDLIPEGPQGKKPGEAVSSDPNTPVPAS
PAYLPPGPLGLPDKMEAPLGYLDEREPGVQKPRKPPEVQALPTTLDRAEGEAKHERSEGK
DPAREGRLEEPEKTPPSPEPLPKEEALPEKERVLDKLELSLLHGRGDGSDFRPEDSRVDE
KEPVEAQQNGDKEEEEEGRKEERLGKFKFMFNIADGGFTELHTLWQNEERAAVSSGKTYD
IWHRRHDYWLLAGIVTHGYARWQDIQNDPRYTILNEPFRSEIHKGNYLEMKNKFLARRFK
LLEQALVIEEQLRRAAYLNMTQDPNHPAMALNARLAEVECLAESHQHLSKESLAGNKPAN
AVLHKVLNQLEELLSDMKADVTRLPSMLSRIPPVAARLQMSERSILSRLTNRAGDPTIQQ
GAFGSSQMYNNFGPNFRGPGPGGIVNYSQMPLGPYVTDT
NT seq
5880 nt
NT seq
+upstream
nt +downstream
nt
atgaggttgtcatcccgctacgtcataaagggttattgtgagggccggggacggggcctg
tggaatgcccaggtcacagtgcccgctccggacacgctcccgatgcccgggacggcacag
gcagcgccagtgcaggggcccagctcgcccgcccgggcaatgcctccaggacccgcaccc
tcgcccagccgcttggccctggccgtctggagacgagcccaggaggtgcccagcacggtc
ctgccctcagcgctgaccctgtgtccctcgagtggccgcgaccccggcctcgttctcctc
actgccggcctggagtccatcgcccagcaggaggaggaagacggcgtcctggggggcttc
gaggagttctttgccgaggagcccgtgagcctccccaagaagaagaaggcccggaagccc
aaggagagcaggcccaaggggaagcgcaggaagaaggaggggagcaatgacgagctgtcc
gagaatgaggaggtgccgggagggaagtctgagagcgagggcagcgactactccccgacc
aagaagaagaagaagaagctcaaggagaagaaggagaagaaggccaagcgcaggaagaag
gaggaggaggaggaggacggcgaggacgggggcctcaaggaacccaagtcgtccgggcag
ctcatggccgagtgggggctggatgacgtggactacctgttctcggaggaggactaccgc
acgctcaccaactacaaggccttcagccagttcctcaggcccctcattgccaggaagaac
ccgaagatccccatgtccaagatgatgaccgtgctgggcgccaagtggcgggagttcagc
gccaacaaccccttcaagggcagctcggccgcggcggccgcggcggcggtggccgcggcc
gtggagacggtcaccatcgctccgccactggccatcagcccccagcagccgccccagccc
gtgcccatccgcaaggccaagaccaaggaggggaaggggcctggcgtgaggaagaagatc
aagggctccaaggatgccaagaagaagggcaagaagaaggcgcaggcgctccggctccgc
cttgggggggcgggcggcaagaggaagaaggggtcctcgagcgaggaagacgagcgggac
gagtccgacctggacagcgccagcgtccacagcgcctcgatgcgctccgagtgctccgcg
gccctgggcaagaagaacaagaggaggcgcaagaagaagaggatggacgatggggacggc
tacgagaccgaccaccaggactactgtgaagtgtgccagcagggcggcgagatcatcctg
tgcgacacctgcccgcgcgcctaccacctcgtctgcctggaccccgagctggagaaggcc
ccggagggcaagtggagctgcccgcactgtgagaaggaggggatccagtgggagcccaaa
gacgaggacgacgaggaggaggagggcggcggcgaggaggaggaggacgaccacatggag
ttctgccgcgtgtgcaaggacgggggcgagctgctgtgctgtgacgcctgcccctcctcc
taccacctgcactgcctcaacccgccgctgcccgagatcccaaacggtgaatggctctgc
ccgcgctgtacttgtcccccactcaagggcaaagtccagcggatcctgcactggaggtgg
acggagcccccagcacccttcatggtagggctgccagggcccgacgtggagcccggtggc
cccccgcccaaggccctggagggcctcccggagagagagttcttcgtcaagtgggcgggg
ctgtcctactggcactgctcctgggtgaaggagctgcagctggagctataccacacggtg
atgtaccggaactaccaaagaaagaacgacatggacgagccgccgcccttcgactacggc
tcgggggacgaggacgggaagaggaagagcaaggacccggtccaggccaggatggaggag
cgcttctaccgctacggcgtcaagcccgagtggatgctggtgcaccgcatcctcaccccc
tctcccctaagcccccttcccctcccccggctcactgacccctgcccgcccagggagctg
atgctgggtgaggacaacaggctgcccaagaaactggccaagaagggcaagaagctcaag
gacgagaagcaggagaagcctccggacacccccattgtggatcccacggtcaagttcgat
aagcagccatggtacatcgatgccacgggcggcacgctgcacccctaccagctggagggc
ctcaactggctgcgcttctcctgggcgcagggcaccgacaccatcctggccgacgagatg
ggtctgggcaagaccgtgcagaccatcgtcttcctctactccctgtacaaggagggccac
tccaaggggccctacctggtcagcgcgcccctgtccaccatcatcaactgggagcgggag
tttgagatgtgggcgcccgacttctacgtggtcacctacacgggggacaaggagagccgc
tcggtcatccgggagaacgagttctccttcgaggacaacgccgtccgcagcgggaagaag
gtcttccgcatgaagaaggaagtgcagatcaagttccacgtgctgctcacctcctacgag
ctcatcaccatcgaccaggccgtgctgggctccatcgagtgggcctgcctggtggtggac
gaggcccaccggctcaagaacaaccagtctaagttcttcagggtcttgaacagctacaag
atcgactacaagctgctgctgacggggacaccgctgcagaacaacctggaggagctgttc
cacctgctgaacttcctcacccccgagcgcttcaacaacctggagggcttcctggaggag
tttgccgacatctccaaggaagaccagatcaagaagctgcacgacctgctggggccgcac
atgctgcggcggctcaaggccgacgtgttcaagaacatgccggccaagacggagctcatc
gtccgcgtggagctgagccagatgcagaagaagtactacaagttcatcctgacgcggaac
ttcgaggcgctcaactccaaggggggcgggaaccaggtgtctctgctcaacatcatgatg
gacctgaagaagtgctgcaaccacccctacctcttccccgtggccgccgtggaggccccg
gtcctgcccaacggctcgtacgacggcggctccctggtcaggtcctcggggaagctgatg
ctgctgcagaagatgctgaagcggctgcgggacgagggccaccgcgtgctcatcttctcc
cagatgaccaagatgctggacctcctggaggacttcctggagtacgagggctacaagtac
gagcggatcgacggcggcatcacaggggggctccggcaggaggccatcgacagattcaac
gcccccggggcccagcagttttgcttcctcctgtccacgcgggccggtggcctgggcatc
aacctggccacggcggacacggtcatcatctatgactcggactggaacccccacaacgac
atccaggccttcagccgcgcccaccgcatcgggcagaacaagaaggtgatgatctaccgc
ttcgtgacgcgggcctcggtggaggagcgcatcacgcaggtggccaagcgcaagatgatg
ctcacgcacctggtggtgcggcccggcctcggctccaagtcgggctccatgaccaagcag
gagctggacgacatcctcaagttcggcacagaggagctgttcaaggacgacgtggagggc
atggtgcagggccagcggcccgtcacgcccatccccgatgtccagtcctccaaaggggga
gccctggccgccagcgccaagaagaagcacggcagcaccccgccaggtgacaacaaggat
gtggaggacagcagtgtgatccactatgacgacgcggccatctccaagctgctggaccgg
aatcaggacgccaccgatgacacggagctgcagaacatgaacgagtacttgagctccttc
aaggtggcgcagtacgtggtgcgggaagaggatggcgtggaggaggtggagcgcgagatc
atcaagcaggaggagaacgtggaccccgactactgggagaagctgctgcggcaccactac
gagcagcagcaggaggacctggcgcgcaacctgggcaagggcaagcgcatccgcaagcag
gtcaactacaacgacgcgacgcaggaggaccagggtgcgcgcgcccggcggcggcggcgg
ctgcggctgcaacctggggtgctgggcttcaacgcgcggcagcgcaaggccttcctgaac
gccatcatgcgctggggcatgccgccccaggacgccttcaactcccactggctggtgcgg
gacctgcggggcaagagcgagaaggagttcagggcctacgtgtccctgttcatgcggcac
ctgtgcgagccgggtgctgacggcgccgagtccttcgccgacggcgtgccccgcgagggg
ctgtcccggcagcacgtgctcacgcgcatcggcgtcatgtccctcgtcaggaagaaggtc
caggagtttgagcacgtgaacgggaagtacagcaccccggacctgatccccgaggggccc
cagggcaagaagccgggcgaggccgtctcctccgaccccaacacccccgtgcccgccagc
cctgcctacctgccgcccggcccgctgggcctgccagacaaaatggaagccccgctgggc
tacctggacgagagggagccgggggtgcagaagccgaggaagcctccggaagtccaggcc
ctgccgaccacactggacagagcggagggcgaggccaagcacgagcgctccgaggggaag
gacccggcccgcgaggggcgcctggaggagccggagaagaccccgccctccccagagccg
ctgcccaaagaggaagcgcttcccgagaaggagcgagtcctggacaagctggagctcagc
ctgctgcacggcaggggcgacggcagcgacttcaggccagaggactccagagtggatgag
aaggagcccgtggaggcccagcagaacggcgacaaggaggaggaggaggaggggaggaag
gaggagcggctcgggaagttcaagttcatgttcaacatcgcagacgggggcttcacagag
ctgcacacgctgtggcagaacgaggagcgtgccgccgtgtcctcggggaagacctacgac
atctggcaccgccgccacgactactggctcctggcgggcatcgtgacgcacggctacgcg
cgctggcaggacatccagaacgacccccggtacacgatcctcaacgagcccttcaggtcg
gagatccacaagggcaactacctggagatgaagaacaagttcctggcccgcaggttcaag
ctgctggagcaggccctggtgatcgaggagcagctgcgcagggccgcgtacctgaacatg
acccaggaccccaaccaccccgccatggccctcaacgcccgcctggccgaggtggagtgt
ctggccgagagccaccagcacctgtccaaggagtcgctggcggggaacaagccggccaac
gccgtcctgcacaaggtcctgaaccagctggaggagctcctcagtgacatgaaggccgac
gtgactcggctgccctccatgctgtcacgcatccccccggtggccgcccgcctgcagatg
tccgagcgcagcatcctcagccgcctgaccaaccgggccggcgaccccaccatccagcag
ggcgctttcggctcctcccagatgtacaacaactttgggcccaacttccggggccccgga
ccgggagggatcgtcaactacagccagatgcccctgggcccctacgtgactgatacctag
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integrated database retrieval system
