Sorex araneus (European shrew): 101543604
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Entry
101543604 CDS
T07854
Symbol
ABCA1
Name
(RefSeq) ATP-binding cassette sub-family A member 1
KO
K05641
ATP-binding cassette, subfamily A (ABC1), member 1
Organism
sara
Sorex araneus (European shrew)
Pathway
sara02010
ABC transporters
sara04148
Efferocytosis
sara04975
Fat digestion and absorption
sara04979
Cholesterol metabolism
sara05417
Lipid and atherosclerosis
Brite
KEGG Orthology (KO) [BR:
sara00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
101543604 (ABCA1)
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
101543604 (ABCA1)
09150 Organismal Systems
09154 Digestive system
04975 Fat digestion and absorption
101543604 (ABCA1)
04979 Cholesterol metabolism
101543604 (ABCA1)
09160 Human Diseases
09166 Cardiovascular disease
05417 Lipid and atherosclerosis
101543604 (ABCA1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sara02000
]
101543604 (ABCA1)
Transporters [BR:
sara02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
101543604 (ABCA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
R1_ABCA1
AAA_21
DUF4162
AAA_23
Motif
Other DBs
NCBI-GeneID:
101543604
NCBI-ProteinID:
XP_004600334
LinkDB
All DBs
Position
Unknown
AA seq
2261 aa
AA seq
DB search
MACWPQLRLLLWKNLTFRRRQTCQLLLEVAWPLFIFFILISVRLSYPPYEQHECHFPNKA
MPSAGTLPWIQGIICNANNPCFRYPTPGEAPGVVGNFNKSIVSRLFSDAQRLLLYSQRDT
SMKDIHKVLRTLQRIENSSSNLKLQDFLRDNETFSVFLSHNLSLPRPTVDRLLGADVRLR
KVFLHGYQLHLTNLCNGSKLEEVIKLGEQEISRLCALPEEKLDATERVLRANMDILKPVV
VKLNSTSFFPTDELAEATKTLLDSLGTLAQELFSMRSWSDMRQEVLFLTNVNSSRTSTQI
YQAVSRIVCGHPEGGGLKIKSLNWYEDNNYKALFGGNSTEEEAGAFYDNSTTPHCNDLMK
NLESSPLSRIIWKALKPLLVGKILYTPDTPATRQVMAEVNKTFQELAVFHDLEGMWEELS
PKIWTFMESSSEMDLVRTLLDSRGNEHFWEQRLDGLDWTAKDIVTFLAKHPEDVQSTNGS
VYTWREAFNETNRAVQTISRFMECVNLNKLEATATEVRLINKSMELLDERKFWAGIVFTG
IAPGSVELPHHVKYKIRMDIDNVERTNKIKDAYWDPGPRADPFEDMRYVWGGFAYLQDIV
EQAIIRVLTGTEKKTGVYVQQMPYPCYVDDIFLRVVSRSMPLFMTLAWIYSVAVIIKGIV
YEKEARLKETMRIMGLDNGILWFSWFISSLIPLLVSAGLLVVILKLGNLLPYSDPSVVFI
FLSMFAVVTILQCFFISTFFSRANLAAACGGIIYFTLYLPYVLCSAWQDHVGFMLKIFVS
LLSPVAFGFGCEYFALFEEQGIGVQWDNLFESPVEGDGFNLTTSVTMMLFDTFLYGVMTW
YIEAVFPGQYGIPRPWYFPCTKSYWFGEECAEKSPPDSSQKGAMEICMEEEPTHLKLGVS
IQNLMKVYRDGMKVAVDGLALNFYEGQITSFLGHNGAGKTTTMSILTGLFPPTSGTAYIL
GKDIRSEMSTIRQNLGVCPQHNVLFDMLTVEEHIWFYARLKGLSEKHVKAEMEQMALDVG
LPPSKLKSKTSQLSGGMQRKLSVALAFVGGSKVVILDEPTAGVDPYSRRGIWELLLKYRQ
GRTIILSTHHMDEADILGDRIAIISHGKLCCVGSSLFLKNQLGTGYYLTLVKKDVDSSLS
SCRNSSSTVSYLKKEDSVSQSSSDAGLGSDHESDTLTIDVSAISNLIRKHVTEARLVEDI
GHELTYVLPYEAAKEGAFVELFHEIDDRLSDLGISSYGISETTLEEIFLKVAEESGVDAE
TSDGTLPARRNRRAFGDKQSCLRPFTEDDVIDPNDSDIDPESRETDLLSGMDGKGSYQVK
GWKLTQQQFVALLWKRLLIARRSRKGFFAQIVLPAVFVCIALVFSLIVPPFGKYPSLELQ
PWMYNEQYTFFSNDAPEDTATQELLNALTKEPGFGTRCMEGHPIPDTPCLVGEEEWTTAS
VPQTIMDLFQNGNWTMDNPSPACQCSNDRTKKMLPVCPLGAGGLPPPQRRQNTADILQNL
SGRNISDYLVKTYVQIIAKSLKNKFWVNEFRYGGFSLGASNSQSLPPSQEVNDAIKQVKK
HLKVAKDSSADRFLSSLGRFMTGLDTKNNVKVWFNNKGWHAISSFLNVINNAILRANLQK
GEKPGQYGITAFNHPLNLTKQQLSEVALMTTSVDVLVSICVIFAMSFVPASFVVFLIQER
VSKAKHLQFISGVKPVIYWLSNFVWDMCNYVVPATLVIIIFICFQQKSYVSSTNLPVLAL
LLLLYGWSITPLMYPASFVFKIPSTAYVVLTSVNLFIGINGSVATFVLELFTNNKLNNIN
DILKSVFLIFPHFCLGRGLIDMVKNQAMADALERFGENRFVSPLSWDLVGRNLFAMAVEG
VVFFLITVLIQYRFFIRPRSVNTKLLPLNDEDEDVRRERQRILDGGGQNDILEIKELTKI
YRRKRKPAVDRICVGIPPGECFGLLGVNGAGKSSTFKMLTGDTSVTRGDAFLNKNSILSN
IHEVHQNMGYCPQFDAITELLTGREHVEFFALLRGVPEKEVGKVGEWAIRKLGLVKYGEK
YAGNYSGGNKRKLSTAMALIGGPPVVFLDEPTTGMDPKARRFLWNCALSVVKEGRSVVLT
SHSMEECEALCTRMAIMVNGRFRCLGSVQHLKNRFGDGYTIVVRIAGSNPDLKPVQEFFG
LAFPGSVLKEKHRNMLQYQLPSSLSSLARIFSILSQSKKRLHIEDYSVSQTTLDQVFVNF
AKDQSDDDHLKDLSLHKNQTVVDVAVLTSFLQDEKVKESYV
NT seq
6786 nt
NT seq
+upstream
nt +downstream
nt
atggcttgttggcctcagctgaggttgctgctgtggaagaatctcacttttcgaagaaga
cagacatgtcaactactgctggaagtggcctggcctttgtttatcttcttcatcttgatc
tctgtccgcttgagctacccaccctatgagcaacatgaatgccactttccaaacaaagcc
atgccctctgcaggaacgctgccttggattcaggggattatctgtaatgccaacaacccc
tgcttccgttacccaactcccggtgaggctcctggggttgttggaaactttaacaaatcc
attgtgtcccgcctcttctccgatgctcagcggcttcttctgtatagccagagagacacc
agcatgaaggacatccataaagttcttcgaacactacagcggatcgagaattccagctca
aacctgaagcttcaggatttccttcgggacaatgaaaccttctcggtgttcctgagtcac
aacctctctctgccaaggcctactgtggacagactgctgggcgctgatgttaggctccgg
aaggtgtttttgcatggctaccagttacatttgaccaacctttgcaatggatccaaatta
gaagaggtgattaaacttggcgaacaggagatttccagactttgtgccctgcctgaggag
aaactggatgcaacagagcgggtccttcgtgccaacatggacatcctgaagccagttgtg
gtaaaactaaactccacgtctttctttcccaccgacgagctggctgaagccaccaaaact
ttgctggatagtcttggaactctcgcccaagagctgttcagcatgaggagctggagtgac
atgcgccaagaagtgctgttcctgaccaacgtgaacagctccaggacctccacgcagata
taccaggctgtgtcgcgcatcgtctgcggccaccccgagggcggaggcctgaagatcaag
tcgctcaattggtatgaggacaacaattacaaggccctgttcggaggcaacagcaccgag
gaagaggccggcgccttctatgacaactccaccactcctcactgcaatgatctgatgaaa
aatctggagtccagtcctctctctcggatcatctggaaagctctcaagcccctgcttgtc
gggaagatcctgtatacacctgacactccagccacaaggcaggtgatggctgaggtgaat
aagactttccaggaattggccgtgtttcatgatctggaaggcatgtgggaagagcttagc
cccaagatttggaccttcatggaaagcagctctgaaatggaccttgttcggactctcttg
gacagcagaggcaacgaacacttctgggaacagcgtttggatggcttagactggacagcc
aaagacattgtgacatttctggccaagcacccggaagatgtccagtccactaatggctct
gtgtatacctggagagaagccttcaatgagaccaaccgggcagtccagaccatatcccgc
ttcatggagtgtgtcaacttgaacaagctggaagcaacagcaacggaggttcgactcatc
aataagtccatggagctgctggatgagaggaagttctgggctggtattgtgtttacggga
attgctcccggcagtgtggagctgcctcatcatgtcaaatacaagatccgaatggacatt
gacaatgtggagaggacaaataagatcaaagatgcgtactgggaccctggtcctcgagct
gacccctttgaagatatgcggtacgtctggggtggctttgcctacttgcaggacatagtg
gaacaggcgatcatcagggtgctcactggcactgagaagaaaactggggtctatgtgcag
cagatgccgtacccttgctacgttgatgacatcttcctgagggtggtgagccgctcaatg
cccctcttcatgaccctggcctggatctactccgtggctgtgatcatcaagggcatcgtg
tacgagaaggaggcgcggctgaaggagaccatgcgcatcatgggcctggacaacggcatc
ctgtggtttagctggttcatcagcagcctcatccccctgctcgtgagcgccggcctgctg
gtggtcatcctgaagttggggaacctgctgccgtacagcgaccccagcgtggtgttcatc
ttcctgtccatgtttgccgtggtgaccatcctgcagtgcttcttcatcagcaccttcttc
tccagagccaacctggcggctgcctgcgggggcatcatctacttcacactgtacctgccc
tacgtcctgtgctcggcctggcaagaccacgtgggcttcatgctcaagatctttgtgagc
ctgctgtctcctgtggctttcgggtttggctgcgagtactttgccctctttgaggagcag
ggcatcggggtccagtgggacaacctctttgaaagccccgtggaaggagatggcttcaac
ctcaccacctcagtcaccatgatgctgttcgacaccttcctgtatggggtgatgacttgg
tacatcgaggccgtctttccaggccagtatgggattcccaggccctggtattttccctgc
accaagtcctactggtttggggaggaatgtgctgagaagagcccccctgattccagccag
aagggagcaatggagatctgcatggaggaggaacccacacacctcaagctgggcgtgtcc
attcagaatctgatgaaggtttaccgagacggcatgaaggtggctgtggatggcctggcc
ttgaacttttatgagggacagatcacctccttcctgggccacaatggagccgggaagacc
actaccatgtcaatcctgacagggttgttcccgcccacctcaggcaccgcctacatcctg
gggaaggacattcgttcagagatgagcaccatccggcagaacctgggtgtctgtccccag
cacaacgtgctgtttgacatgctgactgtcgaggaacacatctggttctatgcccgcctg
aaagggctctccgagaagcacgtgaaagcagagatggagcagatggccctggatgtgggt
ttgccccccagcaaactgaaaagcaagacaagccaattgtcaggtgggatgcagaggaag
ctgtctgtcgctttggcctttgtggggggatccaaagttgtcattctggatgagcccaca
gccggcgtggacccctactcccgtaggggaatatgggagctgctgctcaagtatcggcaa
ggtcgcaccatcattctctccacccaccacatggacgaagcggacatcctgggggaccgg
atcgccatcatctcccacgggaagctgtgctgtgtgggctcctccctgtttctaaagaac
cagctgggaacaggctactacctgaccttggtcaagaaggacgtggactcctcgctcagc
tcctgcagaaatagcagcagtactgtgtcgtacctgaaaaaggaggacagtgtttctcaa
agcagttctgatgctggcctgggcagcgaccatgaaagtgacacgctgaccatcgatgtc
tccgctatctccaacctcatcaggaagcatgtgactgaggcccggctggtggaagacatt
gggcatgagctgacctacgtgctaccctacgaagctgccaaagagggggcctttgtggag
ctcttccatgagatcgatgacaggctgtcggacctgggcatctcgagttacggcatctca
gagaccaccctagaagaaatatttctcaaagtggctgaagaaagtggagtggatgccgag
acctcagatggaaccttgccagcaagacgaaatagacgggcctttggggacaagcagagc
tgtctgcgcccattcactgaagatgatgtgatagatccaaatgattccgacatagaccca
gaatccagggagacagacctgctcagtgggatggacggcaaaggctcctaccaggtgaag
ggctggaaactcacgcagcagcagtttgtggccctgttgtggaagaggctgcttatcgcc
cgacggagccggaagggattctttgctcagattgtcctgccagctgtgtttgtctgcatt
gccttggtattcagcttgatcgtgccaccctttggcaagtaccccagcctggaacttcag
ccctggatgtacaatgaacagtatacatttttcagtaatgatgctcctgaagacactgcc
actcaggaactcttgaatgctctcaccaaagaacctggctttgggactcgctgtatggaa
ggacacccaatcccagacacaccctgcttggtaggggaggaggaatggaccactgcctca
gttccccagaccattatggacctcttccagaacgggaactggaccatggacaacccctcc
cccgcctgccagtgtagcaatgacagaaccaagaagatgctgcccgtgtgtcctctgggg
gccggggggctgcctcctccgcagagaagacagaacacagcggatattcttcagaacctg
tccgggagaaacatttcagattatctggtgaagacttatgtgcagatcatagccaaaagc
ttaaagaacaagttttgggtgaatgaatttaggtatggcggattttctctgggtgccagt
aattcccagtcacttcctccaagtcaagaagttaatgatgccatcaagcaagtgaagaaa
cacttaaaggtggccaaggacagttcggcagatcgatttctcagcagcttgggaaggttc
atgacaggattggacacaaaaaataacgtcaaggtgtggttcaataacaagggctggcat
gccatcagctctttcttgaacgtcatcaacaatgcaattctccgggccaacctgcagaag
ggggagaagcctggccagtatggcatcactgctttcaaccacccgctgaacctcaccaaa
cagcagctctcggaagtggctctgatgaccacatcagtggatgtccttgtgtccatctgt
gtcatctttgcgatgtcctttgtcccggccagctttgttgtattcctgatccaggagcgg
gtcagcaaagctaagcacttgcagttcatcagtggagtgaagcccgtcatctattggctc
tctaattttgtctgggacatgtgcaactatgtggtccctgccacgctggtcattatcatc
ttcatctgcttccagcagaagtcctacgtttcctccactaacctgcctgtgttagccctt
ctccttctgctgtatgggtggtcgatcacacctctcatgtaccccgcctccttcgtgttc
aagatccccagtacagcctatgtggtcctcaccagtgtgaacctcttcattggcatcaat
ggcagcgtggccacttttgtgttggagctcttcaccaacaataagctgaataacatcaat
gatatcctgaagtctgtgttcctgatcttcccacacttttgtttgggacggggactcatt
gacatggtaaagaaccaggcaatggctgatgccttggaaaggtttggagagaatcgcttt
gtctcaccactgtcttgggacttggtgggtcgaaacctttttgccatggctgtggaaggg
gtggtgttcttcctcatcactgttctcatccagtacagattcttcatcagacccagatct
gtaaatacaaagcttctacctctgaatgatgaagatgaagatgtcaggcgggaaagacag
agaattctcgatggaggaggacagaatgacatcttagaaatcaaggagctgactaagata
tatagaaggaagaggaagcctgctgttgacagaatttgtgttggcattcctcctggagag
tgttttgggcttctgggcgtgaatggggcaggtaaatcatcaacttttaagatgttaact
ggagatacttctgttacaagaggagatgctttccttaacaaaaacagtatcttatcaaac
atccacgaagtacatcagaacatgggttattgccctcaatttgatgctatcacagagctg
ctaactgggagagaacacgtggagttctttgccctcttgagaggagtcccggagaaagaa
gttggcaaggttggtgagtgggcaattcggaaactgggccttgtgaaatacggagaaaaa
tatgctggtaactacagtggagggaacaagcgcaagctctccacagccatggctttgata
ggtggaccgcctgtggtgtttctggatgaacccactacaggcatggatcccaaagctcgg
cggttcctgtggaattgtgccctcagtgtggtcaaggaggggagatcagtggtgctgaca
tcccatagtatggaagaatgtgaagctctttgcactcggatggcaattatggtcaatggg
aggttcagatgtcttggtagtgttcaacatctgaaaaataggtttggagacggctatacg
atagttgtacgaatagcaggatccaaccctgatctgaagcctgtccaggagttctttgga
cttgcttttccaggaagtgtcttaaaagagaagcatcggaacatgctccaataccagctt
ccatcctcattatcttccttggcaaggattttcagcatcctttcccagagtaaaaagcga
ctccacatagaagattactctgtttctcagacaacacttgaccaagtatttgtaaacttt
gccaaggaccaaagtgatgatgaccacttaaaggacctgtcattacacaaaaaccagaca
gttgtggatgttgcagttctcacatcttttctacaggatgagaaagtaaaagaaagttat
gtatga
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integrated database retrieval system
