Sorex araneus (European shrew): 101543916
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Entry
101543916 CDS
T07854
Symbol
HDAC6
Name
(RefSeq) histone deacetylase 6
KO
K11407
histone deacetylase 6 [EC:
3.5.1.98
]
Organism
sara
Sorex araneus (European shrew)
Pathway
sara04613
Neutrophil extracellular trap formation
sara05014
Amyotrophic lateral sclerosis
sara05034
Alcoholism
sara05203
Viral carcinogenesis
Brite
KEGG Orthology (KO) [BR:
sara00001
]
09150 Organismal Systems
09151 Immune system
04613 Neutrophil extracellular trap formation
101543916 (HDAC6)
09160 Human Diseases
09161 Cancer: overview
05203 Viral carcinogenesis
101543916 (HDAC6)
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
101543916 (HDAC6)
09165 Substance dependence
05034 Alcoholism
101543916 (HDAC6)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
sara01009
]
101543916 (HDAC6)
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sara03019
]
101543916 (HDAC6)
04131 Membrane trafficking [BR:
sara04131
]
101543916 (HDAC6)
03036 Chromosome and associated proteins [BR:
sara03036
]
101543916 (HDAC6)
Enzymes [BR:
sara01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
101543916 (HDAC6)
Protein phosphatases and associated proteins [BR:
sara01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
101543916 (HDAC6)
Messenger RNA biogenesis [BR:
sara03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
101543916 (HDAC6)
Membrane trafficking [BR:
sara04131
]
Autophagy
Aggrephagy
Other aggrephagy associated proteins
101543916 (HDAC6)
Chromosome and associated proteins [BR:
sara03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class II HDACs
101543916 (HDAC6)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Hist_deacetyl
zf-UBP
zf-UBP_var
Motif
Other DBs
NCBI-GeneID:
101543916
NCBI-ProteinID:
XP_004612981
LinkDB
All DBs
Position
Unknown
AA seq
1136 aa
AA seq
DB search
MTSTGPDSSATRHRRGRHHPHSPPQESAGTSTSKRGVKKGSTRHSSPNLAEVKKKGRMRK
LSLSTEQDIISGLQGLDLNLESRVLTGTGLVFDEQTDEFHRLWDDSVLENLERLRVIREQ
LIQRGLLDRCVSFKARFAEKEELVLVHSQEYVDLIETTQNTNEAELRAIAEGYDSVYLHP
NPYVCACLATGSILTLVDAILEEEIRNGMAIIRPPGNRPQHSRMDECCMFNHIAVAARYA
QQRHNLQRILIVDWNVHHGQGTQLIFDEDPSVLCISIHHYEQNQVCPHLKASNWSPTGVG
PGQGYTINVPWNQEGMRDADYIAIFLRILLPVALEFQPQLVLVATGFDALQGDPKGEMST
TPAGFAQLTHLLMGLADGKLILCLEGGYNLCSLAEGVTASLHTLLGDPCPMLDSPGAPCP
SAQASLFCALEALEPFWEILALSAESLKGDPVERESPENNKEKEKATSLESPSAPVLSWP
TLQARTGLISDQRMMQHYNIWDSHHPERPERISRIMCRLEELGLVKRCHLLAARPATDYE
LLRCHSVEYLSRLRATEKMKGRELHRESISFDSIYICPSTFSCAQLAAGSTCRMVEAVLS
GEVLNGIAVVRPPGHHAEMNTACGFCFFNTVSIAARHAQAFSRKVLRILIIDWDVHHGNG
TQHTFEDDSSVLYISLHRYDHGTFFPVGDEGSSSKVGRGDGAGYNINVAWNGPRMGDTEY
LAAWHRLVLPVAYEFNPELILVSAGFDAARGDPLGGCLVTPEGYAHLTHLLMGLAGGRII
IVLEGGYNLTSISESMAACTRTLLGDPPPLLALDRPLKANALASISETIQVHRRYWRSLR
VTRRGDIKRFCPKRYHQEAPHSYHSGFLEEEIDIPGASALDASTGECTLASSAEEATSSM
NKSNINTSLMVGSQNKSSEVAEQDTSWDDTTSDRAVAQATLDKSPSASCTVSTLPPSFEQ
EVTSPDMPAGRLKALGPASAAQAIPDMKAIEEESPVEGAVGGQEENNSLVFQLLENQVDL
EQVSFYAITPMTWCPHLELVCPVPKEGLDVTMACQDCGTDQENWVCLSCYQVYCGRYVNG
HMVQHHEISGHPLVLSYADLSVWCYNCQFYVHHQDLMEVKNIAHQNKFGVNMPHSH
NT seq
3411 nt
NT seq
+upstream
nt +downstream
nt
atgacctccactggtccggattcctctgctaccaggcatcggcggggtcgacaccaccct
cactcgcccccgcaggaatccgctggcacctcaacctcgaagcgaggtgtaaagaaaggt
tctacacggcactccagccccaatctagcagaggtgaagaagaaaggcagaatgagaaag
ctcagcctatccaccgagcaggatatcatctctgggctgcaagggctggatctgaacctt
gagagcagggtgcttactggcacaggcttggtgtttgatgaacaaaccgatgaattccac
cgcctctgggatgacagcgtcctggaaaacctggagcgtctccgtgtcatcagggagcag
ctgatccagagaggcctcctggaccgctgtgtgtctttcaaggcccgctttgccgagaag
gaggagctggtgctggttcacagccaagaatatgttgatctgatagagacaacccaaaac
acgaatgaggcggagcttcgtgccatagcagaaggctatgactcagtttatctacatccg
aatccatatgtctgtgcctgcctggccacgggctcaatcctcacactggtagatgccata
ttggaagaggagatccggaatggcatggccatcatcaggcctcctggaaaccgtccccag
cacagtcgtatggatgagtgttgcatgttcaaccacatagccgtggctgcccgctatgca
cagcagagacataacctccagaggatccttatcgtggattggaatgtacaccatggtcag
ggcacccagctcatctttgatgaggaccccagtgtcctgtgtatctccatccaccactac
gaacagaatcaggtctgtccccatcttaaagcctcaaactggtctccaacaggagttggc
ccaggtcagggatataccataaatgtgccttggaaccaggagggaatgcgagatgctgac
tacattgccattttcctgcgcatccttctgcccgtggcactcgagttccagccccagctg
gtacttgtagctactggatttgatgcactccaaggggaccctaagggtgagatgtccacc
actcccgcagggtttgcccagcttacgcacctgctcatgggcttggcggatggcaagctg
atcctttgtctggagggtggctacaacctgtgttctctggccgagggtgttactgcctct
ctccacacccttctgggagacccgtgtcccatgctggactcccctggggccccgtgccca
agtgcccaggcatccctattctgtgctctggaagccctagagcccttctgggagatcctt
gcactgtcagctgagtccctgaaaggggacccagtggaaagggagagcccggagaacaac
aaagaaaaggaaaaggccacatcgctagagtctcccagtgctccagtcctgtcatggccc
acgctacaggccaggacagggctcatctcagatcagcggatgatgcaacattataacatc
tgggacagccaccacccagaaagacctgagcgcatctcgcgcataatgtgtcgcctagaa
gagctgggcctggtaaagcgctgccatctcctggctgcacgtccggccacagattatgag
ctactcagatgtcacagtgtggagtacctgagtcgtctacgggccacggagaagatgaaa
ggccgagagcttcaccgggaaagcatcagctttgattctatctacatctgtcccagtacc
ttctcatgtgcgcaactggctgcaggttccacttgccgtatggtggaggccgttctctct
ggagaggtcttgaatggaattgctgtggtccgcccaccaggccaccacgccgagatgaac
actgcatgcggtttttgttttttcaacacggtttcaattgctgctcgacatgcccaggct
ttcagtaggaaagtgctacggatattgatcatagactgggatgttcatcatggtaatgga
acccagcacacattcgaggacgattccagtgtgttgtacatctctttacatcgctatgat
catggaacattctttcccgtgggggatgaaggcagcagcagcaaagtgggacgaggtgat
ggtgcaggctacaatatcaacgtagcatggaatggaccccgcatgggtgatactgaatac
ctggctgcttggcatcgcttagtgcttcctgttgcctatgagtttaacccagagctcatc
cttgtatctgctggttttgacgctgcccggggtgacccccttggaggctgccttgtgaca
cctgagggctatgcccatctcacccacctgctgatgggccttgctggtggtcgaattatc
atcgtgctagagggcggctataacctgacatccatctcagaatctatggcagcctgtacc
cgcaccctcctgggcgacccaccaccactgctggctttagatcgccctctaaaagcaaat
gccctagcctccatctctgagacgatccaggttcatcgtagatactggcgtagtttgcgc
gttacaagaaggggtgatatcaaaagattttgtcctaagagataccatcaggaagcaccc
cactcttatcattctgggttcctagaagaagaaatagacattcctggagcaagtgctcta
gatgccagtacgggtgaatgtactttggcatcatctgcagaagaggccacttcgagtatg
aataaatcaaacatcaatacatccttaatggtgggatctcagaacaagtcctcagaggta
gctgaacaggatacttcctgggatgacaccacttcggacagagctgtggcacaagccaca
ctggacaagagcccttccgcttcatgtactgtcagtacattaccaccttcttttgagcaa
gaagttacatcacccgatatgccagctggacgcctcaaggccttgggaccagccagtgca
gctcaggccatacctgacatgaaggccatagaagaagagagtccagtggaaggggctgtt
ggtggccaggaagagaataactctctggtatttcagttgcttgaaaaccaagtggacctt
gagcaggtctcattttatgccataacaccaatgacctggtgtccccatttggagttggtc
tgccctgtaccaaaagaaggattggatgttactatggcgtgccaggattgtggcacagac
caggagaactgggtttgtttatcttgctaccaggtctactgtggccgctatgttaatggc
catatggtgcaacaccacgaaatctcaggacacccactggtccttagctatgctgatcta
tcagtctggtgctacaactgtcaattttatgtacatcatcaggatcttatggaggtgaag
aacatcgctcaccagaataagtttggggtgaacatgccccattcacattaa
DBGET
integrated database retrieval system
