Sorex araneus (European shrew): 101544026
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Entry
101544026 CDS
T07854
Symbol
NWD1
Name
(RefSeq) NACHT domain- and WD repeat-containing protein 1
KO
K24734
NACHT domain- and WD repeat-containing protein
Organism
sara
Sorex araneus (European shrew)
Brite
KEGG Orthology (KO) [BR:
sara00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
sara04990
]
101544026 (NWD1)
Domain-containing proteins not elsewhere classified [BR:
sara04990
]
Other domain-containing proteins
WD40 repeat (WDR) domain-containing proteins
101544026 (NWD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_Prp19
WD40_CDC20-Fz
WD40
Beta-prop_EML_2
WD40_WDHD1_1st
Beta-prop_TEP1_2nd
EIF3I
WDR55
Beta-prop_EML
Beta-prop_CAF1B_HIR1
Beta-prop_WDR19_1st
NBCH_WD40
Beta-prop_WDR90_POC16_2nd
ANAPC4_WD40
WD40_MABP1-WDR62_2nd
Beta-prop_HPS5
Beta-prop_TEP1_C
Beta-prop_WDR75_1st
WD40_MABP1-WDR62_1st
Beta-prop_SCAP
AAA_16
Beta-prop_RIG_2nd
PEP5_VPS11_N
Beta-prop_IFT140_1st
Beta-prop_NUP159_NUP214
NACHT
KNTC1_N
WDR90_beta-prop_4th
AAA_22
Beta-prop_WDR35_TULP_N
Beta-prop_Nup120_160
AAA
AAA_5
NPHP3_N
DUF4062
AAA_25
Beta-prop_EIPR1
ATPase_2
RuvB_N
Mg_chelatase
Beta-prop_ELP1_1st
SdiA-regulated
Motif
Other DBs
NCBI-GeneID:
101544026
NCBI-ProteinID:
XP_004616723
LinkDB
All DBs
Position
Unknown
AA seq
1561 aa
AA seq
DB search
MDAEREALHSSACPEVQTFCQKHGLMFEVVDLHWGIQSSEASAHMSPELCLEELERCQRT
SLGPAFVALLGDQYGPCPLPTLIEEKEWEVLRAQLATRPSDLEVVCRRFRKDENAVPPAF
LLQTPGASESRSPEEPSVSSALRAAAQDALRLGLLSQEQCSRYHRSVMAWEMERGVLGPD
GEQGATVFLREVQDLQRHILDDCALWLVDRLADGCLDMDAQRLLGDLKGRLADTRPGALK
AHQLPWSRDLVNPKNKAHGRYLKELGEQFVARANHQVLERLREQEAAGPEPSWLFTEIRH
HLALGAQATRTFCGRQDLLALLGQWLRQNHDSPHPPVLLWGPPGVGKTALLCRLAEQMPA
LLGRKTVTVLRLLGASGLSAGAGGLLRGLCCQVCLAYGLPPPPAQVLAARARLVHFFHTL
LHTVSGRHFESLVILLDSLDDVDGGHWGRRVLWLPTQCPPRVHLILSACSGPRGALDAAR
RALPGVAEWEVPPLPAGQAQELVQRLLAAARRSLSPGQQDLLWASLPECGHPGRLQLAFE
EARRWASFTVPAPLAATAEEATHQLCARLEQTHGRLLVAGVLGYLAASRHGLSEAELKDI
LSLDDEVLQAVYRDWTPPSRELLRFPPLLWVRLRRDLGHCLAQRPVDGFTLLGIAQRQLA
EVVQARYLSGPEAAKRHGVLADFFSGVWSQGTKKLITLPLVGKPLNLDRKVAAQPLWFSD
TVANVRKLQELPLHLLRAGRVQELKQEVLGSMNWISCRGISGGLEALLDDFALCGPHVDC
AELTLVQEALQLCHPAVELRGLDKCLLYTELLARLLYFSTSHPALVGPLCQQAQSWFRQC
PHPVLVPLAGFLQPPGGPLLATLTGCHKGISAVAWSLEKQLLLVGTQDGTVAVWDTEEWQ
TVYVLTGHTGEVKGVEVLAQGTLAISASRDHTLRLWDLQAGREKFTIWDGGSQEPPEPQT
WSLHVDGPGKVLYSVSSCKVNAWHLETAELVFCILGDAGDPWMCAAVLPAQAVLLTVSAG
RVVSLWSSATGKRQGKRLLSSIMDEVPTCGVPVRKRGTMVVGFSQGALCLVSSEEDRLLD
TLPAAVGLLVASEDDSLLAAGFGRSVRVFLADSQGFCRFMASDLEHEDTVGAAAFGLQNN
LLVTGSQDTLIQVWSLSEQGALLAVLEGVGAPVSLLAAGGALVASASQQSSSLKVWDLSR
TQQQGPCVPFPDRTGLTAVSHNGAFVYFPKIGDRNKVSIWDLAEGQEQDAVDTSNEVCCL
EVAEQAQLLLAGLVSGAVLVFPLRSRQDVLCIPPPEARRAVRCVALSKDERRLAVAYDHT
VLVLDVSPGEPCPVIDGPTYTFYTQLPETLARAAVLADCRVLYGMSDGSLYVYECAGARV
SPLEAHAGRVTCLEVSHREQLAVSGSEESRLCLWDLQACKWRLELSYTSSFCRGVQCACF
SRDDKHVFAGLKDRSVIVWSVQDGTLLAVQFVHAVVNRIIPTSNGFVAPTRHGHLIRQRF
QCPAARVSQQDPLKNFKKAVWMVKCRQREELAAGEEALQDTEGPREDEAKCHRRSQVCLL
L
NT seq
4686 nt
NT seq
+upstream
nt +downstream
nt
atggacgccgagagagaggccctgcacagcagcgcctgccccgaggtgcagaccttctgc
cagaagcacgggctgatgtttgaggtggtggacctgcactggggcattcagagcagcgag
gcttctgcacacatgagccctgagttgtgtctggaggagcttgagcgctgccagaggaca
tcgctgggcccagcgtttgtggcgctgctgggggaccagtatggaccctgcccgctgccc
actctcattgaggagaaggagtgggaggtgctgagggcccagctggccaccaggcccagc
gacctggaggtggtgtgtcggcgcttccgcaaggacgagaacgcggtgccgcccgccttc
ctactgcagacacctggtgcatccgagtcccgcagccccgaggagcccagcgtgagctcc
gcgctgcgcgctgcagcccaggacgccctccggctgggcctcctgtcccaggagcagtgc
agccgctaccaccgctcagtcatggcatgggagatggagcgcggcgtgctgggccccgat
ggtgagcagggcgccaccgttttcctgcgggaggtccaggacctgcagcgccacatcctg
gatgactgtgccctatggctggtggaccggctggcagacggctgcctggacatggacgca
cagcgcctgctgggcgacctcaagggcaggctggctgacacgcgccctggggccctcaag
gcccatcagctgccctggagccgcgacctggtgaaccccaaaaacaaggcccatggccgc
tacctgaaggagctgggcgagcagttcgtggccagggccaaccaccaggtgctggagcgg
cttcgggagcaggaggcggcagggccggagccctcgtggctcttcactgagatccgccac
cacctggccctgggcgcccaggccacccgcaccttctgcggccgccaggacctgctggcg
ctgctgggccagtggctgcggcagaaccacgacagcccgcacccgccggtgctgctctgg
gggcccccgggcgtgggcaagacggcgctgctgtgccgcctggccgagcaaatgcctgcg
ctgctgggccgcaagacggtgacggtgttgcggctgctgggcgcgagcgggctgagcgcg
ggtgcgggcgggctgctgcgggggctctgctgccaggtgtgtctggcctacgggctcccg
ccgccgcccgcgcaggtgctggcggcccgcgcgcgcctcgtgcacttctttcacacgctc
ctgcacaccgtgtccggccgccactttgagtccctcgtcatcctgctggactcgctggat
gacgtggacggcgggcactggggccggcgggtgctctggctgcccacccagtgccccccg
cgcgtccacctcatcctctcggcctgctcggggccgcggggggccctggacgccgcgcgc
cgcgcgctgcctggggtcgccgagtgggaggtgccgccgctgcccgcgggccaggcgcag
gaattggtgcagcggctgctggcggctgctcggcgctcgctgagccccgggcagcaggac
ctgctgtgggccagtctgcccgagtgcggccatcctggacggctgcagttggccttcgag
gaggcgcgccgctgggcctcgttcaccgtgcctgcgcccctggctgccacagctgaggag
gccacacaccagctgtgtgcgcgcctggagcagacccatggacggctgctggtggccggt
gtgctaggctacctcgcggcttcccggcacgggctgtctgaggcggagctgaaggacatc
ttgtccctggacgacgaggtgctgcaggccgtgtaccgggactggacgccacccagcaga
gagctgctgcgcttccccccgctgctgtgggtgaggctgaggcgcgacctgggccactgc
ctggcacagcggcccgtggacggcttcactctcctgggcatcgcccagaggcagttggct
gaagtggtccaagcgcgctacctgtcggggcctgaggcagccaagaggcacggggtgctg
gctgacttcttctcgggagtgtggagccagggcaccaagaagctcatcacgctgccactg
gtggggaagcccctcaacctggaccgcaaggtggccgcacagccgctgtggttctcagac
acggtggccaacgtgcggaagctgcaggagctgccgctacacctgctgcgtgctggccgt
gtccaggagctgaagcaggaggttctgggcagcatgaattggatttcctgccggggcatc
tctggagggctagaggccctgctggacgactttgccctgtgtggcccccatgtggactgc
gctgaattgaccctggtgcaagaggccctccagctgtgccatcctgccgtggagctgcgt
ggcttggacaagtgtctcctgtacacggagctcctggcccggctgctctacttctcaacc
agtcaccctgcactagtggggccactgtgccagcaggctcagagctggttccggcagtgt
ccacaccccgtgctggtgccccttgccggcttcctccagccccctggagggcccctcctg
gccaccctcactggatgtcataagggcatcagtgccgtggcatggagtctggagaagcag
ctgctgctggtgggcacccaggatggcacggtggccgtgtgggacacggaggagtggcag
acagtctacgtcctgactggacatacaggcgaggtgaagggcgtggaggtgctggcccag
gggacacttgccatctccgcatccagggaccacacactgcgcctctgggacctgcaggcg
gggcgggagaagttcaccatctgggatggaggctcccaggagccccctgagcctcagacc
tggagtctacatgtggatgggcctgggaaggtgctgtactcagtgtccagctgcaaggtc
aacgcctggcacctggagacagctgagcttgtcttctgcattctgggggatgctggggac
ccctggatgtgtgcggccgtcctgcctgcccaggctgtactgctgactgtgtctgcaggc
cgtgtggtcagcctgtggagctcagccactgggaagcggcagggcaagcgactgctgtcc
agcatcatggacgaggtgcccacatgtggggtgccagtgcggaaacgggggacaatggtc
gtcgggttcagccaaggtgccctgtgcctggtctcctccgaggaggacaggctgctggac
acactcccagcagcagtggggctcctggtggcttccgaggatgactcccttcttgctgca
ggctttggaaggtccgtgcgtgtcttcctggcggactcgcagggcttctgccggttcatg
gccagcgacctggagcacgaggacacggtgggcgcagctgccttcgggctccagaacaac
ctgctggtcacagggtcccaggacacgctcatccaggtgtggagcctgtctgaacagggt
gctctgctggcggtgctggagggtgtcggggcccctgtgagcctgctggctgcaggcggg
gccctggtggcctctgcgtcacagcagtcctcgtccctgaaagtgtgggacctcagccgc
acgcagcagcagggaccctgcgtgccattcccggacaggacggggctcacagctgtgtcc
cacaatggggccttcgtctatttccccaaaatcggggacaggaacaaggtgtccatctgg
gacctggcggaaggccaggagcaggacgccgtggacacgtctaatgaggtgtgctgcctg
gaggtggcagagcaggcgcagctgctgctggcggggctggtgtcgggcgcggtgctggtg
ttcccgctgcgttcccgccaggacgtgctctgcatccccccgcccgaggcccggcgtgct
gtgcgctgcgtggccctgagcaaggacgagcggcgcctggccgtcgcctatgaccacaca
gtcttggtgctggacgtgagtccaggcgagccctgcccggtcatcgacggccccacctac
accttctacacgcagctgcctgagacgctggcccgtgcggccgtcttggcagactgccgc
gtgctctacggcatgagcgacggcagcctgtacgtgtatgagtgtgccggagccagggtg
tccccgcttgaggcgcacgccggccgcgtcacctgcttggaggtcagccaccgggagcag
ctggcagtcagtgggtcagaggagtctcggctgtgtctgtgggacctgcaggcctgcaag
tggaggctggagctcagctacacgagctccttctgcaggggcgtgcagtgcgcctgcttc
tcccgggatgacaagcacgtgtttgccggcctcaaagaccgctcggtgatcgtctggagc
gtgcaggacggcaccctgctggccgtgcagttcgtccacgcggtggtgaaccgcatcatc
cccacttccaacggcttcgtggcacccactcgccatggccacctcatccgccagcgcttc
caatgccctgcggctcgtgtctcacagcaggacccgctcaagaactttaaaaaggccgtg
tggatggtcaagtgccgacagcgggaggaactggccgccggcgaggaggccctgcaagat
acagagggcccccgggaggacgaggccaagtgccaccgccgctcacaggtctgcctgctg
ctgtga
DBGET
integrated database retrieval system
