Sorex araneus (European shrew): 101544473
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Entry
101544473 CDS
T07854
Symbol
SMC5
Name
(RefSeq) structural maintenance of chromosomes protein 5
KO
K22803
structural maintenance of chromosomes protein 5
Organism
sara
Sorex araneus (European shrew)
Brite
KEGG Orthology (KO) [BR:
sara00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sara03400
]
101544473 (SMC5)
DNA repair and recombination proteins [BR:
sara03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
SMC5-SMC6 complex
101544473 (SMC5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_23
SMC_N
AAA_15
AAA_21
AAA_29
REF2_N
AAA_25
Med9
Motif
Other DBs
NCBI-GeneID:
101544473
NCBI-ProteinID:
XP_004600174
LinkDB
All DBs
Position
Unknown
AA seq
1112 aa
AA seq
DB search
MATPSRRTSAPGPLPSKRAHPRDSASEVPSKRRSSAPPAPVPMPAAAAAPPPLQASGPFV
EGSIVRIAMENFLTYDICEVSPGPHLNMIIGANGTGKSSIVCAICLGLAGKPAFMGRADK
VGFFVKRGCTKGMVEIELFRTSGNLIITREIDVAKNQSFWFINKKSTTQKVVEEQVAALN
IQVGNLCQFLPQDKVGEFAKLSKIELLEATEKSIGPPEMHRYHCELKNFREKEKQLETSC
KEKTEYLEKMVQRNERYKQDVERFYERKRHLDLIEMLEAKRPWVEYENVRQEYEEVKRVR
DRVKEEVRKLKDGQIPLARRIEESERQRHTLEARIKEKAMDIKETSQKCKQKQDIIERKD
KHIEELQQALIVKQNEENDRQRRISNTRKMIEDLQNELKNTENCENLQPQIDAITNDLRR
VQDEKALCEGEIIDKRRERETLEKEKKNVDDHIVRFDNLMNQKEDKLRQRYRDTYDAVLW
LRNNRDKFKQRVCEPIMLTINMKDNKNAKYIENHIPSNDLRAFVFESQEDMEVFLKEVRD
NKKLRVNAVIAPRNSYADKAPSRPLNELKQYGFFSYLRELFDAPDPVMSYLCCQYHIHEV
PVGTERTRERIERVIQETRLKQIYTAEEKYVVKTSFYSNKVISSNTSLKVAQFLTVTVDL
EQRRHLEEQLKEINRKLQAVESALVSLRDTNKHLEHKDNELRQKKKELLERKTKKRQLEQ
KISSKLGSLKLMEQDTCNLEEEERKASTKIKEINVQKAKLVTELTHLMKMCTSLQIQKVD
LILQNTTVISEKNKLESDYMAAASQLRLREQHFIELDENRLTLLQKCKELMKRARQVCNL
SAEQTVPQEYQTQVPTILNGHNSTLPMAFQDLPNTLDEIDALLTEERSRASCFTGLNPTV
VEEYTKREEEIEQLTEELKIKKVELDQYRENISQVKERWLNPLKELVEKINEKFSYFFSS
MQCAGEVDLHTENEEDYDKYGIRIRVKFRSSTQLHELTPHHQSGGERSVSTMLYLMALQE
LNRCPFRVVDEINQGMDPINERRVFEMVVNTACKENTSQYFFITPKLLQNLPYTDKMTVL
FVYNGPHMLEPNRWNLKAFQRRRRRITFTQPS
NT seq
3339 nt
NT seq
+upstream
nt +downstream
nt
atggcgactccgagccggaggacgtcggcccccggccccctcccctccaagagagctcac
cccagagactctgcgtcggaggtcccgagcaagcgaaggagttcggccccgccggcgccg
gtgccgatgcccgcggctgcggccgcgcctccgccgctgcaggcgtccgggcccttcgtg
gagggctcgatcgtgcgcatcgcgatggagaacttcttaacatatgatatctgtgaagta
tctcctggaccccatttgaatatgattattggagctaatggaacaggaaagtctagcatt
gtgtgtgccatttgccttggattagcaggcaaacctgctttcatgggtcgagcagataag
gttggtttttttgtgaagagaggatgtaccaaaggcatggttgaaattgaattgttcagg
acttctggaaatcttataattacccgtgagattgatgtggcaaaaaatcagtccttttgg
ttcatcaacaaaaaatctacaactcagaaagtagtagaagaacaagttgcagccttaaat
attcaagtgggcaatctttgccagtttctacctcaggataaagttggagaatttgctaaa
ctcagtaaaattgaactcttggaagcaactgaaaagtcgattggtcccccagaaatgcac
agatatcactgtgaactcaaaaacttcagggagaaagaaaaacaactagagacctcatgc
aaagagaaaaccgagtatctagagaaaatggttcagagaaatgagagatataaacaagat
gtagaacgattttatgaacgtaaacgacacttagatttaattgagatgcttgaagcaaaa
aggccatgggtggaatatgaaaatgttcgtcaggaatatgaagaagtgaaacgagttcgt
gaccgagtgaaggaagaggtccgaaagctgaaagacgggcagatccccttggcgaggcgc
attgaagaaagtgaaaggcagcgccacaccttggaggcgagaatcaaagagaaggcaatg
gatattaaggagacatctcaaaaatgtaaacaaaaacaagatataatagaaaggaaagat
aaacatattgaggaacttcagcaagcactaatagtaaaacaaaatgaagagaatgaccga
cagaggaggataagtaatacccgcaaaatgatagaagatttgcagaatgaactaaagaac
acagaaaactgtgagaatcttcaaccccagatcgatgccattacaaatgatctgagacga
gttcaagatgaaaaggcattatgtgaaggtgaaataattgacaagagaagagaaagggaa
actctagagaaagagaaaaagaatgtggatgatcatattgtacgctttgacaatcttatg
aatcaaaaggaagataagttgagacagagataccgtgacacttacgatgcagttttatgg
ctaagaaacaatagagacaaatttaagcaaagagtctgtgagcccatcatgctcacgatc
aatatgaaagataataaaaatgctaaatacattgaaaatcatattccatcaaatgacttg
agagcttttgtatttgaaagtcaagaagatatggaggttttccttaaagaggttcgtgac
aataaaaaattaagagtaaatgctgttattgctccaaggaattcatatgcagataaagcg
ccttcaagacctctgaatgaactgaaacaatatgggtttttctcctatctgcgtgagttg
tttgacgcacctgatcctgtcatgagttacctttgctgccagtatcatattcatgaagtt
cctgtaggaactgagagaaccagggagcgaattgaacgggtgatacaagaaacccgatta
aagcaaatctatacagcagaagaaaagtatgtcgtgaaaacttctttttattccaacaaa
gttatctccagtaacacatccctaaaagtagcccagtttctcacagtcactgtggatctt
gagcaaagaagacacttagaagagcagctaaaggaaattaatagaaaattgcaagcagta
gaatcagcactggtttccttacgtgacacaaataaacatcttgaacataaagacaatgaa
cttagacaaaagaaaaaggagcttcttgaaaggaagactaagaaaagacagttggagcaa
aaaattagttccaaactgggaagtttaaagctgatggaacaggacacttgtaaccttgaa
gaggaagaacgaaaagcaagcaccaaaatcaaggaaataaatgtccagaaagcaaaactt
gttactgaattaacacacctgatgaagatgtgtacttctttgcaaatacaaaaagtagat
ttaatacttcaaaatactacagtgatctctgagaagaataaactagaatctgattatatg
gctgcagcatcacagcttcgtctcagagagcaacatttcattgagttggatgaaaataga
ctgacactgttacagaaatgcaaggaacttatgaagagagcgaggcaagtatgtaacctg
agtgcagagcagaccgttcctcaagaatatcagacacaagtacccaccatcctaaatgga
cacaactccacactccccatggcttttcaggatcttccaaacacattggatgaaattgat
gcattattaactgaagaaagatcaagagcatcttgcttcactggactgaatcctacagtt
gttgaggaatatacaaaaagagaagaagaaatagagcagttaactgaggaactaaagata
aagaaggttgaattggatcaatacagggagaacatttcacaggtaaaagaaagatggctt
aatcctctaaaagagctggtagagaaaattaatgaaaaattcagctactttttcagttcc
atgcagtgtgctggtgaagttgatctccatacagaaaatgaggaagactatgataaatat
ggaattcgaattagagtcaaattccgaagtagtactcagctgcatgaattaactcctcat
catcaaagtggaggtgaaagaagtgtttctaccatgttatatctgatggcacttcaggaa
cttaatagatgtccattcagagtagttgatgaaatcaatcagggaatggacccaatcaat
gaaagaagagtgtttgaaatggttgtaaataccgcttgtaaagaaaacacatctcagtac
ttctttattacaccaaagctcctacaaaatcttccttatactgacaagatgacagtatta
tttgtctacaatggtcctcatatgctggaaccaaacagatggaatttaaaggctttccaa
aggcggcggcgccgtattacattcactcaaccttcttaa
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