Sorex araneus (European shrew): 101544629
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Entry
101544629 CDS
T07854
Symbol
COL23A1
Name
(RefSeq) collagen alpha-1(XXIII) chain
KO
K24355
collagen type XXIII alpha
Organism
sara
Sorex araneus (European shrew)
Pathway
sara04974
Protein digestion and absorption
Brite
KEGG Orthology (KO) [BR:
sara00001
]
09150 Organismal Systems
09154 Digestive system
04974 Protein digestion and absorption
101544629 (COL23A1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
sara00536
]
101544629 (COL23A1)
Glycosaminoglycan binding proteins [BR:
sara00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
101544629 (COL23A1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
Motif
Other DBs
NCBI-GeneID:
101544629
NCBI-ProteinID:
XP_004615401
LinkDB
All DBs
Position
Unknown
AA seq
471 aa
AA seq
DB search
MEWRLPVRSLPAHGVRSPLCRRLFLFRRLRRRLRRRASRELHRHRQKLDGLAKLRKIREA
PAECVCPPGPPGRRGKPGRRGDAGPPGPEGRDGYPGPLGLDGKPGLPGPKGEKGAPGDSG
PPGAQGHDGAAGPPGPPGAQGPPGGPGKDGPRGAQGPTGPEGPPGPRGDDGSPSQPGPPG
PPGPKVGTWAPGRAEQGSCQASSPQGEPGQRGADGAVGPRGFPGLKGEQGDTVVIDYDGR
ILDALRGLPGPQGPPGPPGYPGPKGELGLPGAPGADGEKGPRGAKGDPGEAGPAGPKGDA
GEMGLPGLPGPAGLQGQKGEPAGAAESLAQVTMEPGPPGPPGPPGPVGLQGVPGPKGLDG
AKGEKGASGDRGPSGPPGPAGPPGLIGLPGTKGEKGRAGEPGLDGFPGPRGEKGEQSDRG
EKGERGVPGRKGVKGQKGEPGPPGLDQPCPVGPDGLPVPGCWHKEWGGEKA
NT seq
1416 nt
NT seq
+upstream
nt +downstream
nt
atggagtggcgcctgcccgtgcggagcctgcccgctcatggggtccggagcccactgtgc
cgtcgcctcttcctttttcgacgcctccgccgccgcctgaggaggcgagctagccgggag
ttgcaccgccaccgccagaagctggacgggctggccaagctgcggaagattcgagaagct
ccggccgagtgtgtctgcccccctggtccccctggacggcgcggtaagcccggaagaaga
ggcgatgcggggcctcctggccccgagggacgagacggctacccggggccgctgggtctg
gacgggaagcctggactgccgggccccaagggggaaaagggtgcaccaggagactccggc
cccccgggagcccaggggcacgatggagctgcggggcctccaggaccccctggggcacag
ggtccacctggaggccccgggaaggatggaccccggggggcacagggccccacgggccca
gagggacccccggggccccggggagatgacgggtccccaagccagcctgggcctcctgga
cccccagggcccaaggtaggtacctgggcgcccggccgcgcagagcagggctcctgccaa
gcctcctctccacagggcgagccgggccagcgaggggccgacggggccgtgggaccgcgg
ggcttcccgggcctgaagggcgagcagggggacacggtggtgatcgactatgatggcagg
atcctggacgcgctgaggggacttcctggacctcaggggcccccggggccaccaggatac
cccggacccaagggtgaacttgggctgcccggcgccccgggagcggacggggagaagggc
ccccgaggagctaaaggagaccccggagaggcggggccggcggggcccaaaggggacgcg
ggagagatggggctgccaggcctcccgggtcctgctggcctccaggggcagaagggagag
ccggcgggggccgcagagagcctggcccaggtcaccatggagccgggcccccccgggccc
cccgggcccccaggccccgtgggcctgcagggagtcccgggccccaagggccttgatggc
gccaaaggcgagaagggagcatcaggggacaggggccccagcgggccgcccgggccagcg
ggcccaccgggcctcatcgggctgccgggaaccaaaggagagaagggcagagccggggag
ccagggctggacggtttcccgggaccccgcggggagaagggagagcagagcgatcgggga
gagaagggtgaacgaggagtccctgggcgcaagggagtgaaaggtcagaagggggagccg
gggccaccgggcctggaccagccctgccctgtgggccccgatgggctgccggtgcccgga
tgctggcacaaggagtggggtggcgagaaggcctga
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