KEGG   Sorex araneus (European shrew): 101544665
Entry
101544665         CDS       T07854                                 
Name
(RefSeq) vacuolar protein sorting-associated protein 4A-like
  KO
K12196  vacuolar protein-sorting-associated protein 4
Organism
sara  Sorex araneus (European shrew)
Pathway
sara03250  Viral life cycle - HIV-1
sara03272  Virion - Hepatitis viruses
sara04144  Endocytosis
sara04217  Necroptosis
Brite
KEGG Orthology (KO) [BR:sara00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    101544665
   03272 Virion - Hepatitis viruses
    101544665
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    101544665
  09143 Cell growth and death
   04217 Necroptosis
    101544665
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:sara04131]
    101544665
   03400 DNA repair and recombination proteins [BR:sara03400]
    101544665
Membrane trafficking [BR:sara04131]
 Endosome - Lysosome transport
  Endosomal sorting complexes required for transport (ESCRT)
   ESCRT-III complex
    101544665
DNA repair and recombination proteins [BR:sara03400]
 Eukaryotic type
  Check point factors
   Other check point factors
    101544665
SSDB
Motif
Pfam: AAA AAA_5 AAA_16 IstB_IS21 RuvB_N AAA_22 TIP49 AAA_14 AAA_25 AAA_2 AAA_18 DUF815 NPHP3_N MCM nSTAND3 ATPase_2 AAA_33 AAA_24 RNA_helicase bpMoxR AAA_17 NACHT PhoH AAA_7 AAA_28 Mg_chelatase Zeta_toxin Sigma54_activat Torsin AFG1_ATPase Parvo_NS1 DUF5906 AAA_30 ResIII Viral_helicase1 Sigma54_activ_2 PPV_E1_C ABC_tran
Other DBs
NCBI-GeneID: 101544665
NCBI-ProteinID: XP_004622393
LinkDB
Position
Unknown
AA seq 244 aa
MAAIRNHTKLMNCAKEYSTVVIGLTPNCILSLILIAFICELCRFIFRLNLDSLRANVRDN
IFRNAVKMPVGLALNSLSPKYRKKICKRKPWKGILLFGPPGTGKSYLAKAVASEANGSTF
FSISSSDLVSKWLGESEKLVKNLFTLAREHKPSIIFIDEIDSLCSTRSDNESESARRIKT
EFLVQMQGVANDNEGILVLGATNIPWVLDAAIRRRFEKRIYIPLPDVMARKEIFKLHISN
TPHS
NT seq 732 nt   +upstreamnt  +downstreamnt
atggcggcaattcgcaatcacacaaaactcatgaattgcgccaaagaatattcgaccgtg
gtcattggcttaactccaaactgcatcctctctctaattcttatcgcgtttatctgtgaa
ttatgtcgttttatttttcgactgaatttggactcacttcgggcaaacgttcgtgacaac
atatttcgtaatgctgttaagatgccagttggattagccctgaattcgctgagcccaaaa
tatcgaaagaagatttgcaaacgtaagccgtggaaaggtattctactgtttgggccgccg
ggtactggaaagtcctacttggccaaagcggtggcatccgaagcgaatggatcgaccttt
ttcagtatctcctcatccgatttagtctccaagtggttgggcgaaagtgaaaagctcgtc
aagaatttgttcaccttggcccgggagcacaaaccgtccatcatattcatcgacgagatc
gattcactttgttccacccgttcggacaacgaatctgaatcggcgcgtcgtatcaagacg
gaattcttggtccaaatgcaaggcgttgcaaatgacaatgaaggcatattggtacttggc
gccaccaatataccgtgggttttggatgcggccattagacgacgctttgagaagcgaatc
tacataccgctgcctgatgtaatggcaagaaaagagattttcaagttgcacatcagcaac
actccgcacagt

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