Sorex araneus (European shrew): 101544903
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Entry
101544903 CDS
T07854
Symbol
DDX50
Name
(RefSeq) ATP-dependent RNA helicase DDX50
KO
K13183
ATP-dependent RNA helicase DDX50 [EC:
5.6.2.7
]
Organism
sara
Sorex araneus (European shrew)
Brite
KEGG Orthology (KO) [BR:
sara00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sara03041
]
101544903 (DDX50)
Enzymes [BR:
sara01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
101544903 (DDX50)
Spliceosome [BR:
sara03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
101544903 (DDX50)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
GUCT
ResIII
CMS1
Cas3-like_C_2
ERCC3_RAD25_C
AAA_30
Motif
Other DBs
NCBI-GeneID:
101544903
NCBI-ProteinID:
XP_004617167
LinkDB
All DBs
Position
Unknown
AA seq
737 aa
AA seq
DB search
MMPGKLLWGDIMELEAPLDDTENQKKERQKSDRRKSRHRHDSTEKSEARENGVADDLDAP
RPKKAKMKEKLNGDTEGSNRLSDEFSKSHKSRRNDLSNGDIDEYEKKSKRVSSLDNSTHK
SSDNKQEENLTREQKEGAFSNFPISEETIKLLKGRGVTYLFPIQVKTFGPVYEGKDLIAQ
ARTGTGKTFSFAIPLIERLQRNQETIKKSRSPKVLVLAPTRELANQVAKDFKDITRKLSV
ACFYGGTSYQGQINHIRNGIDILVGTPGRIKDHLQSGRLDLSKLRHVVLDEVDQMLDLGF
AEQVEDIIHESYKTDSEDNPQTLLFSATCPQWVYKVAKKYMKSRYEQVDLVGKMTQKAAT
TVEHLAIQCHWSQRPAVIGDVLQVYSGSEGRAIIFCETKKNVTEMAMNPHIKQNAQCLHG
DIAQSQREITLKGFREGSFKVLVATNVAARGLDIPEVDLVIQSSPPQDVESYIHRSGRTG
RAGRTGICVCFYQPRERGQLRYVEQKAGITFKRVGVPSTMDLVKSKSMDAIRSLASVSYA
AVDFFRPSAQRLIEEKGAVDALAAALAHISGASSFEPRSLITSDKGFVTMTLESQDEIQD
VNCAWKELNKKLSSNAVSQITRMCLLKGNMGVCFDVPTTESEKLQAEWHDSDWILSVPAK
LPEIEEYYDGNVSSNSRQRSGWSGGRSGRSGRSGGRSSGRSGRQSRQGSRSGSRQDGRRR
SGNRNRSRSGGHKRSFD
NT seq
2214 nt
NT seq
+upstream
nt +downstream
nt
atgatgcctgggaaactcctctggggggacattatggagctggaggcacctttggacgac
accgagaaccagaagaaggagaggcaaaagagtgatagaaggaagtcaagacatcgccat
gactcaactgagaaatcagaagcaagagaaaatggtgtcgcagatgacctggatgcaccc
aggcccaaaaaggctaaaatgaaagaaaagttaaatggagacactgaaggatctaataga
ctttcggatgaattttctaaatctcataagtcaagaagaaatgatctgtcaaatggagat
attgatgaatatgaaaaaaaatcaaagcgagtgtcatccttagataattctactcataaa
tcaagtgataataaacaagaagagaacctaacccgtgaacagaaagaaggtgctttctcc
aattttcccatatctgaagagaccataaaacttctgaaaggtcgaggggtaacatatctc
tttcctattcaagttaaaacctttggtcctgtatatgaaggaaaagatttaattgctcaa
gcacgtacaggaacaggaaagacattctcttttgccattcccttgattgaaagactccaa
agaaatcaagagacgattaaaaaaagtcgctcaccgaaggtacttgttttggctcctaca
agggaactggcaaaccaagtagctaaagacttcaaagatataactaggaaactcagtgtg
gcatgtttttatggtggaacatcatatcaaggccaaattaaccatatccgaaatggtatt
gacatcttggttggaacacctggtcgtatcaaagaccatctgcagagtggccgattagat
ctttctaaactgcgccatgttgtgcttgatgaagtggatcaaatgttagatttaggtttt
gctgaacaagttgaagatattattcatgaatcttacaaaactgattctgaagacaatcct
cagactttacttttttctgcaacttgcccacagtgggtatacaaagttgcaaaaaaatac
atgaaatccagatatgaacaggttgaccttgttggaaaaatgactcaaaaggctgcaact
actgtggaacatttggccattcagtgccattggtctcaaaggccagcagtcattggagat
gtccttcaagtctacagtggatctgaagggcgagctattattttctgtgaaaccaaaaag
aatgtaactgaaatggcaatgaatccgcacattaaacagaatgctcagtgtttacatggg
gatattgcacaatctcaacgagaaattacactgaaaggcttcagagaaggtagtttcaaa
gttttggtggcaacaaatgtggctgctcgtggtttggacattcctgaagttgatctggtg
attcagagttctcctccacaggatgttgagtcctatattcatcgttctggacgcacaggt
agagctggccggacagggatttgtgtatgtttttatcagccaagagaaagaggtcaacta
agatatgtggaacaaaaagcaggaattacttttaaacgtgtaggtgttccttctacaatg
gatttagttaaatctaaaagcatggatgccatcaggtctctggcttctgtttcttatgct
gctgttgattttttccgaccatcagctcagagactgattgaagagaaaggggcagtggat
gccttggctgcagcattagcccacatctctggcgcatcaagttttgaaccacgatctttg
attacctctgataagggatttgtgaccatgactttggaaagccaggatgaaatacaggat
gtcaactgtgcttggaaagaacttaataaaaagctgagtagtaatgctgtgtcccaaatt
accagaatgtgcctcctaaaaggaaatatgggtgtttgctttgatgttcccacaactgag
tcagaaaagttacaggcagaatggcatgattcagactggatactatcagtgccagccaaa
ttacctgaaattgaagaatattatgatggaaacgtatcttctaattccagacagaggagt
ggctggtcaggtggccgttctggccggtctggccggtcaggtggtcgatccagtggccgt
tctggtagacagagtcgacaggggagtcggtcaggaagtcgacaagatggtagaagacga
agtgggaatagaaatcgatcaagaagtgggggccacaaacgaagttttgactga
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