Sorex araneus (European shrew): 101544974
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Entry
101544974 CDS
T07854
Name
(RefSeq) protein transport protein Sec16A
KO
K20353
COPII coat assembly protein SEC16
Organism
sara
Sorex araneus (European shrew)
Brite
KEGG Orthology (KO) [BR:
sara00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sara04131
]
101544974
Membrane trafficking [BR:
sara04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
101544974
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos2
TPR_Sec16
Sec16
Motif
Other DBs
NCBI-GeneID:
101544974
NCBI-ProteinID:
XP_004613459
LinkDB
All DBs
Position
Unknown
AA seq
1842 aa
AA seq
DB search
MFFQGGETENEENLSYEKPGSAAPADLDGAPKAPSAQYENVENLEFVQNQEVLPSEPPGV
ELAPSDQPRYGLLPGPASSRLGVPDAAPHPVRPDSASSGHSSRSLRTLPGAARPQDLAGT
FIQQEVGKPEGEAPGSFFKQIDSSPVGGEVDEAPGGQSYQSSLSQPPTPSPPKPTGVFQT
SANSSFEPVKSHLVGVKPVEADRANVVGEVRDTHAQQTQPRAAAAPPDASPGNLEQPPDN
METLFMPRDGPLPPATAKEAGHGPSHAVGPPSDAALPTPEKRPLTRAQGAGKCESPATTL
WAQNELPDFGGNVLLAPAAPVLHVPVNPRPLEVIQPPDEGVFSQQPSSRPPLPGGDTLGA
SENLENPPKMGEEEALPSQVARDAQEPQGPEKAQLEPAPPPLSGHRAALPEPSDVGSPLG
PGQSQNSAQPPASLATTDTGQQLPPPRPPPTSSVAVAATASSQATVRPDQQWPQSPPPDY
YYYRPLYDGYQPQYPSPYPPDPAAGPLYYQDVYGMYDPRYRPYDSTTSAYAESYRYPEPE
RPSSRASHSSDRPPARRECPEGYYSSKGWSSQSDYYANYYSGQYDYGDLGRWDRYHYGSR
FRDPRAYDQRYWHDAEYDMYRKDSYAHGDRSDKYDDPWRYDPRFTGSFDDDPEPRRDPYG
EEADRHSVHSEHSAQSLRSRRSSLSSHSHQSQMYRGHHVTAGSYDAPHPPGSFHGDYTYG
AYGGAFPEASWSTVERAPSRPTSPEKFPVPHLCARFGPGGQLIKVMPNLPSEGQPALVEI
HSMESLLQHTPEQEEMRSFPGPLGKDDTHKVDVINFAQKKATKCLQDENLLDKESASLLW
NFIVLLCRQNGTVVGTDIAELLLRDHKTVWLPGKSPNEANLIDFTHEAVERVEEEESVEA
QLSFLGGQPPPASTLEKEVERFRELLLYGRKKDALESAMKNALWGHALLLASKMDSRTHA
KVMTRFANSLPINDPLQTVYQLMSGRMPAASTCCGDEKWGDWRPHLAMVLSNLSSNMDVE
SRTMVTMGDTLASKGLLDAAHFCYLMAQLGFGVYTKKSTKLVLIGSNHSLPFPKFATNEA
IQRTEAYEYAQSLGAQTCALPNFQVFKFIYSCRLAEMGLATQAFHYCEVIAQSILAQPHS
HSPVLISQLVQVASQLRLFDPQLKERPEEESFVEPAWLTQLQRVDEQVKEGAVVWRQDAA
VPQCRPSSPSSDVGSCEGPGSALPAGPGPDNPLLAPPMPAAEPLGQSVRLLPSAPQRLPG
SQPALPAGVPMFPVPAPPGPALGFPEPSVPDPTALYPGPGLPPGGPPLQEPGATLQEAPG
RHLLPELREGDVGGALPDLGPPRVPQDYEPSVGWEPPPPAPSPIQDVKRAAPAKKEPKEP
KKSSEPWFFSRWLYGKKRTEAYLPDDKNKSIVWDEKKNRWVDVNEPEEEKKAPPPPPTSL
LKAPQAAPPGPGGAPRASVNMFSRKAGEQSYLQGSLLASGALMGADELARYFPDRNLALY
VATWNMQGQKELPANLDELLLPAEADYAQDLYVVGVQEGCSDRREWEARLQETLGPHYVM
LHSVAHGALYMSVLIRRDLIWFCSEVESSTVTTRIVSQIKTKGALGVSFTFFGTSFLFIT
SHFTSGDGKVSERLLDYSKTVQGLSLPRNVPNTSPYRSDAADVTTRFDGVFWFGDFNFRL
SGGRAAVDAVLRQELGPDVQALLQRDQLSREMRRGSIFKGFREADIHFLPSYKFDIGKDS
YDSSAKQRTPSYTDRVLYRSRHADDICALHYACCRGVRTSDHRPVYGLFRVKVRPGRDNI
PLAAGKFDRDLYLLGIKRRISKELQRQRALRGTSASLVCTIS
NT seq
5529 nt
NT seq
+upstream
nt +downstream
nt
atgttcttccaagggggcgagacggagaacgaggagaacctctcgtatgagaagccagga
tctgcagcgccagccgacctggacggagctcccaaggctcccagcgcccagtacgagaat
gtggagaacttggaattcgttcagaatcaagaagttctaccaagcgagcctccgggtgtg
gagctggcgcctagcgatcagcccagatacgggctccttcctgggccggccagctccagg
ctcggcgtcccggatgcagcgccgcaccccgtgcgtcccgacagtgcgtcctccggccac
agcagcaggagcctccgcacccttccgggggcagccaggccccaggacttggctggcacc
ttcattcagcaggaagttgggaagcccgaaggtgaggctccggggagttttttcaagcag
attgattcttctcccgtcggaggggaggtagatgaggcccctgggggccagagttaccag
agcagcctttcccagcccccaaccccgagtccccccaagcccacgggggtattccagaca
agtgcaaatagttcttttgaaccagtgaaatcccatctggttggggtgaaaccagtggaa
gcagatcgagctaacgtggtgggggaggtgagggacacgcatgcccagcagacgcagccc
cgagcagccgctgctccgcctgatgcctctccgggcaacctggagcagcccccagacaac
atggagaccctcttcatgccccgcgatggccctctgcccccagccacggccaaggaggcc
ggccacgggccttcacatgctgtggggccaccctcggacgctgcgcttccaaccccggag
aaaaggcctttgactcgtgcccagggagctgggaagtgtgagagcccggcgaccactctc
tgggctcagaacgagctgcctgactttgggggcaacgtcctcctggcccctgctgcacct
gtgctccacgtccctgtgaatcctcggcccctcgaagtgattcagcccccagacgaaggg
gtcttcagccagcagccaagctccaggccaccgctgccgggcggggacacccttggtgcc
tctgagaatctggagaatccccccaagatgggcgaggaggaagcccttccctctcaggtg
gcacgagatgcccaggagcctcagggcccagagaaagctcagctggagccggcaccacct
cccctgtcagggcacagagcggctcttccagaaccttcagatgtgggcagccctcttggg
ccagggcagtctcaaaactctgcccagccacctgcaagcctggccacaactgacacgggc
cagcagctgcctccgcctcggccccctccgacctccagcgtggcagttgcggccactgcc
tcaagccaggcaaccgtgcgcccagatcagcagtggccacagtcgccacccccggactac
tactactaccggcccctgtatgatggctaccagccccagtacccctcgccgtacccgcct
gaccctgccgcgggccccctctattaccaggatgtctatggcatgtatgaccctcgctac
cggccctatgacagcaccacgtcagcatacgccgagagctaccgctaccccgagcccgag
aggcccagctcccgcgccagccacagttccgaccggcctcctgccaggcgcgagtgccct
gaaggttactacagctccaaagggtggagcagccagagcgattactacgccaactactac
tcgggccagtacgactatggagatttggggcgctgggatcgctaccactatggctccagg
ttcagggacccccgcgcctacgaccagaggtactggcacgacgctgagtatgacatgtac
cggaaagacagctacgctcacggggacaggtccgataagtatgacgacccttggaggtat
gatccccgcttcaccgggagcttcgacgatgaccccgagccccgcagggacccgtacggg
gaggaggcggaccggcacagcgtgcacagcgagcactcggcccagagcctacggagccgc
cgcagcagcttaagctcgcactcccaccagagccagatgtaccgaggccaccacgtgacg
gccggctcctacgacgccccgcaccccccaggctcctttcacggcgactacacgtatggc
gcgtacgggggcgccttcccggaagccagctggtccacggtggaacgggcaccctcgaga
cccacctctcccgagaaattcccggtgccgcacctctgtgcccgcttcggtcccgggggt
cagctcattaaggtgatgcccaacttgccgtcggagggtcagcctgcgctggtggagatc
cacagcatggagagcctgctgcagcacacgcccgagcaggaggagatgcgctcgttcccc
gggcctctgggcaaagatgacacgcataaagtggatgttattaattttgcacagaaaaaa
gctacaaagtgtttacaggatgagaatttacttgacaaagaatctgcgagtcttctttgg
aattttattgtgctgctgtgcagacagaatgggactgtggtgggaacagatatcgcggag
ctgctgttacgcgaccataagaccgtgtggcttcccgggaagtcgcccaatgaggccaac
ctgattgatttcacccacgaggcggtggagcgggtggaggaggaggagtcggtggaggcg
cagctgtctttcctgggtggccagccgccgcccgccagcacgctggagaaggaagtcgag
aggttccgggagctgttgctgtacggccgcaaaaaggatgctctggaatctgccatgaaa
aacgccttatggggccacgctctgttgcttgccagtaagatggacagccggacacacgcc
aaggtcatgaccaggttcgccaacagccttcccatcaatgaccccctgcagactgtctac
cagctgatgtcgggccggatgcctgcggcgtccacgtgctgtggggacgagaaatggggg
gactggaggccgcacctcgccatggttctgtccaacctgagcagcaacatggatgtggag
tccaggacgatggtcaccatgggcgacaccctggcttccaagggccttctggacgccgcc
catttctgctacctcatggcccagctcggattcggggtgtacaccaagaaatccacaaag
ctggtcttgattggctcgaaccacagtttgccgtttccgaagttcgcgaccaacgaagcg
attcagaggacagaagcctatgagtatgctcagtccctgggggcacagacctgcgcgctc
cccaacttccaggtgttcaagttcatctactcttgccgcctggccgagatggggctcgct
acgcaggccttccactactgcgaggtcatcgcccagagcatcctggcccagccccacagc
cactccccggtgctcatcagccagctggtccaggttgcatcccagctgcgtctcttcgac
cctcagctgaaggagcggcccgaggaggagtccttcgtggagcccgcctggctgacccag
ctgcagcgtgtggacgaacaggtcaaggagggcgctgtggtgtggcgccaggatgcagct
gtcccgcagtgccgtcccagctcacccagttctgacgtgggctcctgcgagggcccggga
tcagctctgcccgcaggcccgggccctgacaacccgctgctggcccccccgatgccagct
gctgagccgctgggccagagtgtgcggctgctgccttcagcgccgcagaggctccccggc
agccagccggccctccccgcaggggtgcccatgtttcctgtgcctgcgcccccaggaccc
gccctgggctttccggaaccctcggtgcccgatcccacagctctgtaccccgggcctggc
ctgccgcccggcggcccacctctccaggagccaggagcgacactgcaggaggcccccggc
agacacctgctcccggagctcagagaaggggatgtgggcggagccctgcctgatctgggt
ccccccagggtgccgcaggactacgagccctctgtggggtgggagccaccgcctcctgcc
ccgtcgcccatccaggatgtgaagagagccgcaccggccaaaaaggagcccaaggaacct
aagaagagcagcgagccctggttcttctcgcgctggctctacggcaagaagcggaccgag
gcgtacctgcctgacgacaagaacaagtcgatcgtctgggacgagaagaagaaccgctgg
gtggatgtcaacgagcccgaggaggagaagaaggctccgcccccaccccccacctcactt
ctgaaggctccacaggctgcgcccccggggcctggaggggcccccagagcctctgtgaac
atgttctctaggaaagcaggtgagcagagctacctgcaggggagcctcctggccagcggg
gccctgatgggggccgacgagctggcccgctacttcccggaccggaacttggcactgtac
gtggccacatggaacatgcaggggcagaaggagctgcccgccaacctggacgagctgctg
ctgcccgcggaggccgactacgcccaggacctctacgtggtgggcgtccaggagggctgc
tccgacaggcgtgagtgggaggcgcgcctgcaggagacactgggcccgcactatgtgatg
ctgcactcggtggcgcacggcgccctctacatgtctgtgctcatccgccgggacctcatc
tggttctgctcagaggtggagagctccacggtgaccacgcgcatcgtgtcccagatcaag
accaagggcgccctgggcgtcagcttcaccttcttcggcacctcctttctcttcatcacg
tcccacttcacgtctggggacgggaaggtgagtgagcggctgctggactactccaagacg
gtgcagggcctcagcctgcccaggaacgtgcccaacaccagcccctaccgctcggatgca
gccgacgtcaccacccgcttcgacggcgtgttttggtttggagacttcaacttccgcctg
agcgggggccgtgcggctgtggacgctgtcctgaggcaggagctgggccctgatgtgcag
gccctgctgcagcgcgaccagctgagccgcgagatgaggagaggctccatcttcaagggc
ttccgggaagcggacatccacttcctgccctcgtacaagttcgacatcgggaaggattcg
tacgacagctcggccaagcagcggacgccctcgtacacggaccgtgtcctgtacaggagt
cgtcacgcggacgacatctgtgcgctgcactacgcctgctgccgcggggtcaggacctcg
gaccaccggcccgtgtacggcctgttccgggtgaaagtgaggccaggcagagacaacatc
ccactggccgctggcaagtttgaccgggacctgtacctgctcgggatcaagagacgcatc
tccaaagagctccagcggcagcgggcactgcggggcaccagtgccagtctggtgtgcacc
atctcctga
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integrated database retrieval system
