Sorex araneus (European shrew): 101545013
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Entry
101545013 CDS
T07854
Symbol
EIF4A3
Name
(RefSeq) eukaryotic initiation factor 4A-III
KO
K13025
ATP-dependent RNA helicase [EC:
5.6.2.7
]
Organism
sara
Sorex araneus (European shrew)
Pathway
sara03013
Nucleocytoplasmic transport
sara03015
mRNA surveillance pathway
sara03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
sara00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
101545013 (EIF4A3)
09122 Translation
03013 Nucleocytoplasmic transport
101545013 (EIF4A3)
03015 mRNA surveillance pathway
101545013 (EIF4A3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sara03019
]
101545013 (EIF4A3)
03041 Spliceosome [BR:
sara03041
]
101545013 (EIF4A3)
03009 Ribosome biogenesis [BR:
sara03009
]
101545013 (EIF4A3)
03012 Translation factors [BR:
sara03012
]
101545013 (EIF4A3)
Enzymes [BR:
sara01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
101545013 (EIF4A3)
Messenger RNA biogenesis [BR:
sara03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
101545013 (EIF4A3)
mRNA cycle factors
Stress granule specific factors
101545013 (EIF4A3)
Spliceosome [BR:
sara03041
]
Complex C
Other components
EJC/TREX
101545013 (EIF4A3)
Ribosome biogenesis [BR:
sara03009
]
Eukaryotic type
90S particles
Helicases
101545013 (EIF4A3)
Translation factors [BR:
sara03012
]
Eukaryotic type
Initiation factors
eIF-4
101545013 (EIF4A3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
Cas3-like_C_2
AAA_30
AAA_22
Flavi_DEAD
Motif
Other DBs
NCBI-GeneID:
101545013
NCBI-ProteinID:
XP_004621141
LinkDB
All DBs
Position
Unknown
AA seq
411 aa
AA seq
DB search
MAATATMATSGSARKRLLKEEDMTKVEFETSEEVDVTPTFDTMGLREDLLRGIYAYGFEK
PSAIQQRAIKQIIKGRDVIAQSQSGTGKTATFSVSVLQCLDIQVRETQALILAPTRELAV
QIQKGLLALGDYMNVQCHACIGGTNVGEDIRKLDYGQHVVAGTPGRVFDMIRRRSLRTRA
IKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQVVLISATLPHEILEMTNKFMTDPIRIL
VKRDELTLEGIKQFFVAVEREEWKFDTLCDLYDTLTITQAVIFCNTKRKVDWLTEKMREA
NFTVSSMHGDMPQKERESIMKEFRSGASRVLISTDVWARGLDVPQVSLIINYDLPNNREL
YIHRIGRSGRYGRKGVAINFVKNDDIRILRDIEQYYSTQIDEMPMNVADLI
NT seq
1236 nt
NT seq
+upstream
nt +downstream
nt
atggcggccacggccacgatggcgacgtcgggctcggcgcggaagcggctgctcaaggag
gaggacatgaccaaagtggagttcgagacgagcgaggaggtggacgtgacccccacgttc
gacaccatgggcctgcgcgaggacctgctgcgcggcatctacgcctacggcttcgagaag
ccctctgccatccagcagcgcgccatcaagcagatcatcaagggcagagacgtcatcgcg
cagtctcagtccggcactggcaagacggccaccttcagtgtctcggtgctccagtgcctg
gacattcaggtccgtgagacgcaggcgctgatcttggccccgacgagagagctggccgtg
cagatccagaagggcttgctcgctctgggcgactacatgaatgtccagtgccatgcctgc
atcgggggcaccaacgtgggagaggacatccggaagctggactacgggcagcacgtggtg
gccggcacaccgggacgggtctttgatatgattcggcgcagaagcctgaggacacgcgcc
atcaagatgctggtcttggatgaagcggatgaaatgttgaataaaggcttcaaagagcag
atctacgacgtgtaccgctacctgcccccggccacgcaggtggtgctcatcagcgccacg
ctgccccacgagatcctggagatgaccaacaagttcatgaccgaccccatccgcatcctg
gtgaagcgtgacgagctgaccctggagggcatcaagcagttcttcgtggccgtggagcgg
gaggagtggaagttcgacacgctgtgcgacctgtacgacacgctcaccatcacgcaggcc
gtcatcttctgcaacaccaagcggaaggtggactggctgacagagaagatgcgcgaggcc
aacttcaccgtgtcgtccatgcacggagacatgccgcagaaggagcgcgagtccatcatg
aaggagttccgctcgggcgccagccgcgtgctcatctctacagacgtgtgggcccggggc
ctggacgtcccccaggtgtccctcatcatcaactacgacctgcccaacaaccgtgagctg
tacatccacagaatcgggaggtcgggccgctacggccgcaagggtgtagccatcaacttc
gtgaagaacgacgacatccgcatcctcagggacatcgagcagtactactccacccagatc
gacgagatgcccatgaacgttgccgatctcatctga
DBGET
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