Sorex araneus (European shrew): 101545323
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Entry
101545323 CDS
T07854
Symbol
PCDH12
Name
(RefSeq) protocadherin-12
KO
K16499
protocadherin delta 2
Organism
sara
Sorex araneus (European shrew)
Brite
KEGG Orthology (KO) [BR:
sara00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
sara04515
]
101545323 (PCDH12)
Cell adhesion molecules [BR:
sara04515
]
Cadherins
Protocadherins
101545323 (PCDH12)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Motif
Other DBs
NCBI-GeneID:
101545323
NCBI-ProteinID:
XP_004611288
LinkDB
All DBs
Position
Unknown
AA seq
1203 aa
AA seq
DB search
MVRLLSLLLGLWAPSGYLFPPGDGQEVAAVTVTYQVSEEVPSGTVIGTLSRERGRAGSSG
PAGGPFQLLRLPRELPVQVDPTAGLLSTARRLDREQLCRQREPCLLAFDVLATGDQALLH
VEIQVLDINDHEPRFPKGEQELEISESASVHTRIPLDRALDPDTGANTLHSYTLSPSEHF
ALDVILGPDETKHAELVVVKELDREIHSSFHLVLTAYDNGDPPKSGTSLVKVNVLDSNDN
SPVFAESSLALEIQEDAAPGTLLLNLTATDPDQGPNGEVEFFLSRHVPPEVTDTFSIDAK
TGQVILRRPLDYERTPAYEVDVQARDLGPNPIPAHCKILIKVLDVNDNAPSIHVTWASQP
ALVSEALPKDSFVALVTANDPDSGNNGLVHCWLSQTRGHFRLRRTNGNTYMLLTNATLDR
ERWPSYTLAVLAQDQGAQPLGAETQLRIQIADANDNAPVFEQSRYEVSTRENNPPSLHLL
TVRAHDADLGANGQVSYRLEESPVSRWVAIDLVTGEVTAQKSLDYEQVTGFEFQVTAEDR
GQPPLASSVSVWVSLLDANDNAPEVIQPPLSNGRASLSVLVNASTGHLLVPIETPSGRGP
GGAETPALATASSRPFLLVTIIARDADSGPNAELVYSIRGGNEGQLFALSPHLGQLSVNI
TNASGLLGSEWELDIVVEDRGTPSLQSRALLGVSFVSSVDHLRDSAQDAGALSPSVLTAI
CLLVLLAIFGLTLALIVSRRRSEKKDNRAYNCREAESTYRQQPKRPQKHIQKTDIHLVPV
LRGQAEEPGDSGLPPKDAGKDTMVEAGWDSTLPAPYHLTPTLYRTLRNQGNQGALAESQQ
QLPDTVNLFFNHPRQRNASRENLTLPEPPPATGQQGSKSPRVAGSALRRLPGAPSSPEAL
PNSSPSSATLRRQRNLHGRAAPEKESGPRQILRSLVRLSVAAFAEKNPMDELTVESPPVQ
QISQLLSLLHQGQFQPKPNHRGNKYSAKPGCRSTGPDTDSPGSRAGGQAEADHEDGPSDP
EEDLSVKQLLEEELSSLLDPHTGLSLDRLSTPDPAWMARLSLPLATNYRDNVCSADAAAS
EEPRTFQTFGKAAGPELSATGTRLASTFLSEMSSLLELLLERPSVPVEAASEVLRRLSVC
GRTLSLDLATSGASGTEAQGDPAGRAEAEGRTSGPRGLWVAEPGAWGGGTPPGPAHPGPQ
AGC
NT seq
3612 nt
NT seq
+upstream
nt +downstream
nt
atggtgcggcttctgtcacttttgctggggctctgggcaccctccggctacctgttcccg
cccggagacggccaggaggtggccgctgtcacggtgacgtaccaggtatccgaggaggtg
ccgtccgggacggtgattgggacactctcgcgggagcggggccgggccgggagcagcggg
cccgcggggggccccttccagctcctccggctgccccgggagctccccgtccaggtggac
cccacggccgggctgctgagcaccgccaggcggctggaccgggagcagctgtgccggcag
cgtgagccctgcctgctggctttcgacgtgctggccacgggcgaccaggctctgctccac
gtggagatccaggtgctggacatcaatgaccatgagcctcggtttcccaaaggcgagcag
gagctggagatctccgagagcgcctcggtgcacacccggatccccctggacagggccctg
gaccccgacacgggcgccaacaccctccactcctacacgctgtctcccagcgagcacttt
gccctggacgtcatcttgggccccgacgagaccaaacacgcagagctggtggtggtgaag
gagctggaccgggaaatccactcctcctttcatctggtcttgaccgcctacgacaacggg
gacccccccaagtccggcaccagcctggtcaaggtcaacgtcttggactccaacgacaac
agccccgtgtttgcggagagctccctggcgctggagatccaggaagacgctgcccccggg
actctgctcctgaacctgaccgccacggaccctgaccagggccccaacggggaggtggag
ttcttcctgagcagacacgtgccccccgaggtcaccgacaccttcagcatcgatgccaag
acggggcaggtgatcctgcggcggcccctggactatgagaggacgcccgcctacgaggtg
gacgtccaggccagggacctgggtcccaaccccatcccggcccactgcaagattctcatc
aaggtgctggatgtcaacgacaatgccccgagcatccacgtcacgtgggcatcccagcca
gcgctggtgtccgaagcgctgcccaaggacagcttcgtggctctcgtgacggcgaatgac
cccgactcaggaaataacgggctggtgcactgctggctgagccagacgcggggccacttc
cggctgaggaggaccaatggcaacacgtacatgctgctcaccaacgccacgctggacagg
gagcgctggccctcgtacaccctcgccgtgctggcccaggaccagggagcccagcccttg
ggggccgagacgcagctgcgcatccagatcgcagacgccaacgacaacgcgcctgtgttc
gagcagagccgctacgaggtctccacgcgggagaacaaccccccgtcgctgcacctgctc
accgtcagggcgcacgacgcagacctgggggccaacggccaagtctcctaccgcctcgag
gagtccccggtctctcgctgggtggctatcgacttggtcacaggcgaggtgacggctcag
aagtccttggactatgagcaggtgacgggctttgagttccaggtgacggcggaggacagg
ggacagccgccgctggcgtccagcgtctccgtgtgggtcagcctgctggatgccaacgat
aatgccccggaggtgatccagcccccgctcagcaacgggagagccagcctgtccgtgctg
gtcaacgcctccaccggccacctcctggtgcccatcgagacccccagtggccggggccct
gggggtgcagagacaccagccctggccaccgccagctcccggcctttcctgctggtgaca
atcatagcccgggatgcggactcggggccaaacgctgagctggtctacagtatccgcggc
gggaacgaaggtcagctctttgccctcagcccccacctgggccagctgtccgtcaacatc
accaacgccagcggcctcctggggagcgagtgggagctggacatcgtggtggaagaccgg
ggcaccccctccctgcagagccgagccctgctgggggtctcgttcgttagcagcgtggac
cacctcagggactcagcccaggacgcgggggctctgagtccctcggtgctgacggccatc
tgcctgctggtgctgctggccatcttcgggctgaccttggcgctcatcgtgtccaggcgc
cggagtgagaagaaggacaatcgggcctacaactgccgggaagccgagtccacctaccgc
cagcagcccaagaggccccagaaacacatccagaagacggacatccacctggtgcccgtg
cttcggggtcaggcggaggagcccggggacagtgggctgccccctaaggatgcgggcaag
gacacgatggtggaagcaggctgggactccaccttgccggccccctaccacctcaccccc
accctgtaccgcaccctgcgtaaccaaggcaaccagggagcactggctgagagccagcag
cagctgccagacaccgtcaacctcttcttcaaccacccccggcagagaaacgcctcccgg
gagaacctgacgctgcctgagcccccgccggccaccggccagcagggctccaagtccccg
agggtggcaggtagcgccctccggaggctgcccggagccccgagcagccccgaggctctg
ccaaactcgtctccctcctcggctaccctgaggcggcagaggaatctccacggcagagcg
gcccccgagaaggagtcggggcctcggcagatcctgcggagcctcgtccggctgtccgtg
gccgcttttgcggagaagaaccccatggatgagctgaccgtggagtcccctcctgtccag
caaatctcccagctgctgtccttgctgcaccagggacaattccagcccaagcccaaccac
cggggaaataagtactcagccaagccgggctgcaggagcacaggcccagacaccgacagc
ccaggcagcagggctgggggccaggcagaggctgaccacgaggatgggccctcggaccct
gaagaggacctctctgtgaagcagctgctggaagaagagctctcgagcctgctggacccc
cacacaggcctttccctggaccggctcagcacccctgacccggcctggatggcgagactc
tccttacccctggccaccaactaccgggacaacgtgtgctcggccgacgcggcggcctcc
gaggagcccagaaccttccagacgttcggcaaggcggcggggccggagctgagcgccacc
ggcacgcggctggccagcaccttcctgtcggagatgagctcgctcttggagctgctgctg
gagcggcccagcgtgcccgtggaggccgcgtccgaggtgctgcggaggctctcggtctgc
ggcaggaccctcagcctagacctggccaccagcggggcctcgggcacagaagcccagggc
gaccccgcggggagggcggaggccgagggcaggaccagcggccccagaggcctgtgggtg
gcggaaccgggcgcctggggaggaggcacaccgccgggccctgcgcatcctggcccccaa
gctggttgctag
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