Sorex araneus (European shrew): 101545440
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Entry
101545440 CDS
T07854
Symbol
DDX21
Name
(RefSeq) nucleolar RNA helicase 2
KO
K16911
ATP-dependent RNA helicase DDX21 [EC:
5.6.2.7
]
Organism
sara
Sorex araneus (European shrew)
Brite
KEGG Orthology (KO) [BR:
sara00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sara03009
]
101545440 (DDX21)
03036 Chromosome and associated proteins [BR:
sara03036
]
101545440 (DDX21)
Enzymes [BR:
sara01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
101545440 (DDX21)
Ribosome biogenesis [BR:
sara03009
]
Eukaryotic type
Pre-60S particles
Helicases
101545440 (DDX21)
Chromosome and associated proteins [BR:
sara03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
101545440 (DDX21)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
GUCT
Helicase_C
ResIII
CMS1
AAA_30
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
101545440
NCBI-ProteinID:
XP_004617168
LinkDB
All DBs
Position
Unknown
AA seq
770 aa
AA seq
DB search
MPGKLLSDAASESDEAMGKAEKPRKQSEKKSKKENPKPNMIEEAEEQEEIVSPKAKKVKR
KAEPSEVEMNSLKSKKATKKEEPSPDDMSPKSKSVKKKKESVEKNINSSKTKKVKIEEPS
EEEIDTPKPKKMKKEKEMNGEIGAKSPKIKNGFSHSGPDSNSSEAASEESNTELQQEMSV
EQKEGAFSNFPISEDTIKLLKARGVTFLFPIQAKTFHHVYSGKDLIAQARTGTGKTFSFA
IPLIEKLLGQLQDRKRGRAPQVLVLAPTRELANQVSRDFSDITKKLAVACFYGGTPYGGQ
IERMRNGIDILVGTPGRIKDHLQNGKLDLTKLKHVVLDEVDQMLDMGFADQVEEILSVAY
KKDSEDNPQTLLFSATCPHWVFNVAKKYMKSSYEQVDLIGKKTQKAAITVEHLAIKCHWT
QRAAVIGDVIRVYSGFNGRTIIFTETKKEAQELSQSSSIKQDAESLHGDIPQKQREITLK
GFRNGDFGILVATNVAARGLDIPEVDLVVQSCPPKDVESYIHRSGRTGRAGRTGICICFY
QHKEEYQLVQVEQKAGIKFKRIGVPSATEIIKASSKDAIRLLDSVPPTAISHFKQSAEKL
IEEKGAVEALAAALAHISGATSVDQRSLINSQAGFVTMIMKCSIEMPNISYAWKELKEQL
GEDIDSKVKGMVFLKGKQGVCFDIPTATATEVQEKWHDSRRWQLSVATEQPELEGPKEGY
GNFRGQREGNRGFRGQRDRSRGFRGQRGGGNKNNRFQNKGQKRSFSKAFG
NT seq
2313 nt
NT seq
+upstream
nt +downstream
nt
atgccggggaagcttctgagtgacgcggcctcggagtccgacgaagccatggggaaagcg
gagaagccgcgcaagcagagcgagaagaaaagtaaaaaggaaaatccaaagcctaacatg
attgaagaggcagaagaacaggaagaaattgtttctcccaaagctaagaaagttaaaaga
aaagcagagccttctgaggtggaaatgaattcccttaagtccaaaaaggcaacaaagaaa
gaggagccttctccagatgacatgtctcctaaaagcaaaagtgtgaaaaagaaaaaggag
tctgtagaaaagaacattaattcctctaaaaccaaaaaggtaaaaatcgaggagccctct
gaagaagaaatagatactccaaagcccaaaaagatgaagaaagaaaaagaaatgaatgga
gaaattggggcgaaaagtcccaaaataaagaatggattctctcattctggacctgattct
aactccagtgaagctgccagtgaagaaagtaacaccgagttacagcaggaaatgtctgtg
gaacaaaaagaaggcgctttctctaactttcccatatctgaagatactattaaacttctc
aaagcgcgtggggtgacgttcctgtttcctatacaagcaaagacatttcaccatgtctat
agtgggaaggacttaatcgcacaagcacggacaggaactggcaagaccttctcctttgcc
atccctttgattgagaaacttctgggacaattgcaagaccggaagagaggtcgtgcccct
caggtactggttcttgcacccaccagggagttggcaaatcaagtgagcagagatttcagt
gacatcacaaaaaagctggcagtggcttgtttttatggtggaactccctatggaggtcaa
attgaacggatgcggaatgggattgatatcctggttgggacaccgggccgtatcaaagac
cacctacagaatggcaagttagatctcaccaaactgaagcatgttgtcctggatgaagtt
gaccagatgttggatatggggtttgctgatcaagtggaagaaatattaagtgtggcatac
aagaaagattctgaagacaatccccaaacactgcttttttctgcaacttgccctcattgg
gtgtttaatgttgctaagaagtacatgaagtcttcatatgaacaggtggacttgattggc
aaaaagactcagaaagcggcaataactgtggagcatctggccatcaagtgtcactggact
caaagggcagcagttattggggacgtgatccgagtgtacagtgggtttaacggacgcact
atcatcttcactgaaaccaagaaagaagcgcaggagttgtcccagagttcatccattaag
caggatgccgagtcattacatggagacattccacagaagcaaagagaaattaccctgaag
ggttttagaaatggtgattttggtattttggttgcaactaatgttgctgctcgtgggttg
gacatccctgaggttgacctggttgttcaaagttgcccaccaaaagatgtggagtcctat
attcatcgttctgggcgaacaggaagagctggaagaacagggatctgcatctgcttttat
cagcacaaggaggaatatcagttagtgcaagtggaacagaaagcgggaattaaatttaaa
cgaataggtgttccttctgcaacagagatcatcaaagcttccagcaaagatgccatcagg
cttttggattctgttcctcctacggccatcagtcacttcaaacagtcggccgagaaactg
atcgaggagaagggagctgtggaagccctggccgctgcgctggcccatatttcaggtgcc
acctcagtggaccagcgctccttgatcaactcacaggcgggctttgtgaccatgatcatg
aagtgctcaattgaaatgccaaacattagttatgcatggaaggagcttaaagagcagctg
ggagaggatattgattccaaagtgaagggaatggtgtttctcaaaggaaagcagggtgtg
tgttttgacatcccgactgctacagcaacagaagttcaggaaaaatggcatgattctcgg
cgctggcagctgtccgtggccacagagcagccagagctggaaggacccaaggaaggatat
gggaacttccggggacagagggaagggaacagaggcttccggggacagcgggatagaagc
agaggcttccggggacagagaggaggtggcaacaagaataacagatttcagaacaaaggc
cagaaacggagttttagtaaagccttcggttag
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