Sorex araneus (European shrew): 101545799
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Entry
101545799 CDS
T07854
Symbol
ATG13
Name
(RefSeq) autophagy-related protein 13 isoform X1
KO
K08331
autophagy-related protein 13
Organism
sara
Sorex araneus (European shrew)
Pathway
sara04136
Autophagy - other
sara04140
Autophagy - animal
sara04211
Longevity regulating pathway
sara05010
Alzheimer disease
sara05014
Amyotrophic lateral sclerosis
sara05016
Huntington disease
sara05017
Spinocerebellar ataxia
sara05022
Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:
sara00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
101545799 (ATG13)
04136 Autophagy - other
101545799 (ATG13)
09150 Organismal Systems
09149 Aging
04211 Longevity regulating pathway
101545799 (ATG13)
09160 Human Diseases
09164 Neurodegenerative disease
05010 Alzheimer disease
101545799 (ATG13)
05014 Amyotrophic lateral sclerosis
101545799 (ATG13)
05016 Huntington disease
101545799 (ATG13)
05017 Spinocerebellar ataxia
101545799 (ATG13)
05022 Pathways of neurodegeneration - multiple diseases
101545799 (ATG13)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sara04131
]
101545799 (ATG13)
03029 Mitochondrial biogenesis [BR:
sara03029
]
101545799 (ATG13)
Membrane trafficking [BR:
sara04131
]
Autophagy
Autophagosome formation proteins
ULK complex
101545799 (ATG13)
Atg1 complex
101545799 (ATG13)
Mitochondrial biogenesis [BR:
sara03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
101545799 (ATG13)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ATG13
Motif
Other DBs
NCBI-GeneID:
101545799
NCBI-ProteinID:
XP_004619126
LinkDB
All DBs
Position
Unknown
AA seq
548 aa
AA seq
DB search
METDLNSQDRKDLDKFIKFFALKTVQVIVQARLGEKICTRSSSSPTGSDWFNLAIKDIPE
VTHEAKKALAGQLPAVGRSMCVEISLKTSEGDSMELEIWCLEMNEKCDKEIKVSYTVYNR
LSLLLKSLLAITRVTPAYRLSRKQGHEYVILYRIYFGEVQLNGLGEGFQTVRVGTVGTPV
GTITLSCAYRINLAFMSTRQFERTPPIMGIIIDHFVDRPYPSSSHPCNYRATGEDTGVTY
PSVEDSQEVCTTSFSTSPPSQCVFTVTRAHSQSPTPVLTDTLRVPIAGLAFPHQLSSSRL
SYQPAALGVGSADLAYPVVFAAGLNATHPHQLMVPGKEGGVPLVPSQPAHGAQADQERLA
TYTPSDGAHGTATPSSSEDTETVSNSSEGRASPHDVLETIFVRKVGAFVNKPINQVTLTS
LDIPFAMFAPRHLELEDADPMVNPPESPSAASPLQGSLHSNGSSGGSSGNAHDDFVMIDF
KPAFSKDDILPMDLGTFYREFQNPPQLSSLSIDIGAQSMAEDLDSLPEKLAVHEKNVREF
DAFVETLQ
NT seq
1647 nt
NT seq
+upstream
nt +downstream
nt
atggaaactgatctcaattcccaggacagaaaggacctggacaagttcattaaatttttt
gcccttaagacagtccaagtgattgtccaggctagacttggtgagaagatctgtactcgt
tcatcttcatctccaactggatcagattggttcaatttagcaatcaaagacatcccagag
gttacacatgaagccaaaaaggcactggcagggcagctgcctgctgtcgggaggtctatg
tgtgtggagatctcacttaagacttctgagggtgattccatggagttagaaatttggtgt
cttgaaatgaatgaaaagtgtgataaagagatcaaagtttcctacacggtgtacaacaga
ctctcattgttgctgaagtctctcctggctataactagagtgacgccggcctacagactc
tccaggaagcaagggcatgagtatgtcatattgtacaggatatatttcggggaagtccag
ctaaatggtttaggagaaggtttccagacagttcgtgttgggacagtgggcacccctgtg
ggtaccattactctttcttgtgcttacagaatcaacttggcattcatgtctaccaggcaa
tttgagcggacgccacctatcatggggattatcattgatcattttgtggaccgcccctat
cccagctcctcgcacccctgcaattacagagctacaggcgaggacactggggtgacatac
ccttctgtagaagattctcaagaagtgtgcaccacctctttttccacttcccctccgtcc
cagtgtgtgttcactgtcacaagggcacattctcagagccctactcctgtgctgacggac
accctgagggtccccattgcaggactggcctttccccaccaactctcaagctctcgcctt
tcctatcagcctgccgccctgggcgttggatcagctgacctggcttatccagtagtgttt
gctgctggcctaaacgccactcaccctcaccagctgatggttcctggcaaggaaggtggg
gtcccccttgttcccagccagcccgcccatggtgcccaggctgaccaggagagattggcc
acctacaccccttctgacggggcccacggcacagccacaccttccagcagtgaggacaca
gaaaccgtgtcgaacagcagcgagggacgggcctctccccatgatgtcttggagaccatc
tttgtccgaaaagttggggcttttgtcaacaaacccatcaaccaggtgaccctgaccagt
ttggacataccctttgccatgttcgctcccaggcatttagagctggaggacgccgaccct
atggtgaatcctcccgagtcccccagcgctgcgtcccctctccagggcagtctgcactcg
aacggctccagcggtggcagcagcggcaacgcccacgatgactttgtcatgatcgacttt
aaaccggctttttctaaagacgacattcttccaatggacttggggaccttctaccgtgaa
tttcagaacccccctcaactgagcagcctgtccattgatattggggcacagtccatggct
gaggacttggactctctcccggagaagctggccgtgcacgagaagaatgtgcgagaattc
gatgccttcgtagaaaccctgcagtaa
DBGET
integrated database retrieval system
