Sorex araneus (European shrew): 101545908
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Entry
101545908 CDS
T07854
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM38
KO
K12014
tripartite motif-containing protein 38 [EC:
2.3.2.27
]
Organism
sara
Sorex araneus (European shrew)
Brite
KEGG Orthology (KO) [BR:
sara00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sara04121
]
101545908
Enzymes [BR:
sara01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
101545908
Ubiquitin system [BR:
sara04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
101545908
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SPRY
PRY
zf-B_box
zf-C3HC4_4
zf-RING_UBOX
zf-C3HC4
zf-C3HC4_2
RING_XB3-XBAT31
zf-RING_2
zf-RING_10
zf-Nse
RDM
TMCO5
ApoLp-III
zf-C3HC4_3
Motif
Other DBs
NCBI-GeneID:
101545908
NCBI-ProteinID:
XP_004622039
LinkDB
All DBs
Position
Unknown
AA seq
476 aa
AA seq
DB search
MASDSTATKKLREEASCSICQQLMVEPVSVNCGHSFCRMCIVNFIENQKEMSSVETFCCP
ECHTQFQKESIRPIKQLEILIETIKEMEHEKLCEEHGEPFHLFCQDDGQLICWYCERTPQ
HRGHHTDLLKDACQFYQKKFQEAVIKLRKLEDQCKRWKLSTRDHIIKWEEKINLRKQKIQ
SDFKNLYYFLHEEEKSFLWKLENEKEQVLKRLQDCEAKLDKQSEELKKHILELERKCQGS
AQKLLQDVKGTLSRSSAVKLKTPEAPSLEVHTECSVSKLYFDMRKFLESYEASVILDPGT
AHSELILSDNGRQVTRGSTQMKSNIPERFRVLPCVLGHDVFISGRHYFEVYMGKGTEWDV
GVCLENVPRDSDITLKPQFGFWALRRCKQYGYVALTSPRTPLQLREELEFVGVFLDQEAG
LVSFYNMNTGSHIFTFPKASFSHSLRPYFRVGKDSLLSLPSSRHVNKEADSPASLV
NT seq
1431 nt
NT seq
+upstream
nt +downstream
nt
atggcctcagactccacagctaccaagaagctgagggaggaagcctcctgctccatctgc
caacagctgatggtcgagcccgtgagcgtcaactgtggacacagcttctgccgcatgtgc
atagtgaatttcattgagaatcagaaagagatgtcgtcagtggagacattttgctgtcct
gagtgtcacactcagttccagaaggaaagcatccggccgataaaacaactggaaattctt
attgaaaccatcaaggaaatggagcacgaaaagctgtgtgaggagcacggagagccgttc
cacctgttctgccaagatgatggtcagctcatctgctggtactgtgagcgcacaccacag
cacagaggacaccacacagatcttttaaaggatgcatgccagttctaccagaaaaagttc
caggaagctgtcataaagctgaggaaactggaagaccaatgtaagagatggaaactgagc
acaagagatcatataataaaatgggaggagaagataaatctgagaaaacaaaaaatccag
tctgattttaagaatctttactacttcctgcatgaggaggaaaagtcttttctgtggaaa
ttagagaatgaaaaagagcaagttctgaagaggctgcaggactgtgaagctaagctggac
aagcagagcgaggaactcaagaaacacattctggagctggagagaaaatgtcagggatcg
gcccagaaattgctccaggatgtgaaaggcaccttgagcaggagttcagccgtcaagcta
aaaacaccggaggctccctctttggaagtccacactgaatgcagtgtttctaaactttac
tttgatatgaggaaatttttagagagttatgaagccagtgtgattctggatccgggtaca
gctcacagtgaattaattctctctgacaatggaagacaagtgactcgtggatccacccag
atgaagtctaatattcctgagaggtttcgagtcttaccttgcgtcctgggtcacgacgtc
ttcatctctgggagacattactttgaagtgtacatggggaagggaactgagtgggatgta
ggggtctgcctggaaaatgtgcccagggacagtgacataaccctgaagccccagttcgga
ttctgggccctcagacgttgcaaacagtatggctatgtagccctgacctctccccgaact
cctcttcagcttagagaggagctggagtttgtgggggttttcctggaccaggaagctgga
cttgtctccttttacaacatgaataccggctcccacatcttcaccttccccaaggcttct
ttctctcatagtctcaggccctatttccgggttggtaaagattcactgttgtctttgcct
tcatccagacatgtaaataaagaagccgattctccagcttctttagtttag
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