Sorex araneus (European shrew): 101546313
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Entry
101546313 CDS
T07854
Symbol
SPTBN1
Name
(RefSeq) spectrin beta chain, non-erythrocytic 1
KO
K06115
spectrin beta, non-erythrocytic 1/4/5
Organism
sara
Sorex araneus (European shrew)
Pathway
sara04517
IgSF CAM signaling
sara04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
sara00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
101546313 (SPTBN1)
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
101546313 (SPTBN1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
sara04812
]
101546313 (SPTBN1)
Cytoskeleton proteins [BR:
sara04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
101546313 (SPTBN1)
Intermediate filaments
Intermediate filament-binding proteins
101546313 (SPTBN1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Spectrin
CH
PH_9
PH
CAMSAP_CH
SOS1_NGEF_PH
PH_11
Motif
Other DBs
NCBI-GeneID:
101546313
NCBI-ProteinID:
XP_004615860
LinkDB
All DBs
Position
Unknown
AA seq
2361 aa
AA seq
DB search
MTTTVATDYDNIEIQQQYSDVNNRWDVDDWDNENSSARLFERSRIKALADEREAVQKKTF
TKWVNSHLARVSCRITDLYTDLRDGRMLIKLLEVLSGERLPKPTKGRMRIHCLENVDKAL
QFLKEQRVHLENMGSHDIVDGNHRLTLGLIWTIILRFQIQDISVETEDNKEKKSAKDALL
LWCQMKTAGYPNVNIHNFTTSWRDGMAFNALIHKHRPDLIDFDKLKKSNAHYNLQNAFNL
AEQHLGLTKLLDPEDISVDHPDEKSIITYVVTYYHYFSKMKALAVEGKRIGKVLDNAIET
EKMIEKYESLASDLLEWIEQTIIILNNRKFANSLVGVQQQLQAFNTYRTVEKPPKFTEKG
NLEVLLFTIQSKMRANNQKVYMPREGKLISDINKAWERLEKAEHERELALRNELIRQEKL
EQLARRFDRKAAMRETWLSENQRLVSQDNFGFDLPAVEAATKKHEAIETDIAAYEERVQA
VVAVARELEAENYHDIKRITARKDNVIRLWEYLLELLRARRQRLEMNLGLQKIFQEMLYI
MDWMDEMKVLLLSQDFGKHLLGVEDLLQKHALVEADIGIQAERVRAVNASAQKFAADGEG
YKPCDPQVIRDRVAHMEFCYQELCQLAAERRARLEESRRLWKFFWEMAEEEGWIREKEKI
LSSDDYGRDLTSVVRLLSQHRAFEDEMSGRSGHLEQTIREGEAMITEQHFGFEKTRERIA
DVREQWASLGRLAAVRKRRLEEALLLHQFQADADDVDAWMLDILKIVSSSDVGHDEYSTQ
SLVKKHKDVAEEIANYRPAIDALHEQAGALPPEHAESPAVRARLAGVEERYKEVAELTRL
RKQALQDTLALYKMFNEADACELWIDEKEQWLDSMQIPEKLEDLEVIQHRFESLEPEMNS
QASRVAVVNQIARQLMHSGHPSEKDIKAQQDKLNTRWSQFRELVDRKKDALLSALSIQNY
HLECNETKSWIREKTKVIESTQDLGNDLAGVMALQRKLTGMERDLVAIEAKLSDLQKEAE
KLESEHPDQAQAILSRLAEIGGVWEEMRTALRNREASLGEASKLQQFLRDLDDFQSWLSR
TQTAIASEDMPNTLAEAEKLLTQHENIKNEIDNYEEDYQKMRDMGEMVTQGQTDAQYMFL
RQRLQALDTGWNELHRMWENRQSLLSQSHAYQQFLRDTKQAEAFLNNQEYVLAHTEMPAT
LEGAEAAIRKQEDFMTTMDANEEKISAVVESGRRLLSAGNVSSDRIQEKVDSIDDRHRKN
REAASELLMRLKDNRDLQKFLQDCQELSLWINEKMLTAQDMSYDEARNLHSKWLKHQAFM
AELASNKEWLDKIEKEGMQLISEKPETEAVVKEKLTGLHKMWEVLESTTQTKAQRLFDAN
KAELFTQSCADLDKWLHGLETQIQSDDYGKDLTSVNILLKKQQMLENQMEVRKKEIEELQ
SQAQALSQEGKSTDEVDSKRLTVQTKFRELLEPLTERKQYLLASKEIHQFNRDVEDEILW
VGERMPLATSTDHGHNLQTVQLLIKKNQTLQKEIQGHQPRIDDIFERSQSIVTASSPNAE
AIRQRLADLKQLWGQLMAETEKRHTRLEEAHRAQQYYFDAAEAEAWMSEQELYMMSEEKA
KDEQSAVSMLKKHQILEQAVEDYAETVHQLSTTSRALVAEGHPESERISMRQSKVDKLYA
GLKDLAEERRGKLDERHRLFQLNREVDDLEQWIAEREVVAGSHELGQDYEHVTMLQERFR
EFARDTGNIGQERVDTVNHMADELINSGHSDAATIAEWKDGLNEAWADLLELIDTRTQIL
AASYELHKFYHDAKEIFGRIQDKHKKLPEELGRDQNTVETLQRMHTTFEHDIQALGTQVR
QLQEDAARLQAAYAGDKADDIQKRENEVLEAWKALLDACEGRRVRLLDTGDKFRFFSMVR
DLMLWMDDVIRQIEAQEKPRDVSSVELLMNNHQGIKAEIDARNDSFTTCIELGKSLLARK
HYASEEIKEKLLQLTEKRKEMIDKWEDRWEWLRLILEVHQFSRDASVAEAWLLGQEPYLS
SREIGQSVDEVEKLIKRHEAFEKSAATWDERFSALERLTTLELLEVRRQQEEEERKRRPP
SPEQSTKVSEEAESQQWDASKGEPVSHNGLPADQGSPRMTDKGDMSELVNGAAEQRTSSK
ESSPIPSPTSDRKAKTGLTAQGAATLPARTQDAPSAQMEGFLNRKHEWEAHNKKASSRSW
HNVYCVINNQEMGFYKDAKTAASGVPYHSEVPVSLREAVCEVALDYKKKKHVFKLRLSDG
NEYLFQAKDDEEMNAWIQAISSAIADKHEVAASTQSTPASSRAQTLPTSVVTITSESSPG
KREKDKEKDKEKRFSLFGKKK
NT seq
7086 nt
NT seq
+upstream
nt +downstream
nt
atgaccaccaccgtagccacagactacgacaacatcgagatccagcagcagtacagcgac
gtcaacaaccgctgggacgtggacgactgggacaatgagaacagttcggcgcggctcttc
gagcgctcgcgcatcaaggcgctggcagatgagcgcgaggccgtgcagaagaagaccttc
accaagtgggtcaactcccacctggcccgggtgtcctgccggatcacagacctgtacacg
gaccttcgggacgggcggatgctcatcaagctgctggaggtgctctccggggagaggctg
cccaaacccaccaagggccgcatgcgcatccactgcctggagaacgtggacaaggccctg
cagttcctgaaggagcagagggtccacctcgagaacatggggtcccacgacatcgtggac
gggaaccaccggctcaccctgggcctcatctggaccatcatcctgcgcttccagatccaa
gatatcagtgtcgaaaccgaagacaacaaggagaagaaatccgccaaggacgcgctcctc
ctgtggtgccagatgaagacggccgggtaccccaacgtcaacatccacaacttcaccacg
agctggcgggacggcatggccttcaacgccctgatccacaagcaccggcctgacctgatc
gatttcgacaagttgaagaaatccaacgcacactacaatctccagaatgcattcaacctg
gctgagcagcacctgggcctcaccaagttgctggaccctgaggacatcagcgtggaccac
cccgacgagaagtctatcatcacctacgtggtgacctactaccactacttctccaagatg
aaggccctggccgtggaggggaagcgaatcgggaaggtgcttgacaatgctattgaaaca
gagaaaatgatagaaaagtacgaatcacttgcctctgaccttctggaatggatcgaacaa
accatcatcattttgaacaatcgcaagtttgccaactcgttggtgggggtccagcagcaa
ctccaggccttcaacacgtaccgcaccgtggagaagccccccaagttcaccgagaaggga
aacctggaggtgctgctcttcacgatccagagcaagatgcgggccaacaaccagaaggtc
tacatgccacgggaggggaagctcatctctgacatcaacaaggcctgggagcgactggaa
aaagctgagcacgagcgtgagctggccctgcggaacgagctcatccggcaggagaaactg
gaacagctcgcacgcagattcgaccgcaaggcggccatgcgggagacgtggctgagcgag
aaccagcgcctggtgtctcaggacaactttggattcgaccttcccgccgtggaggcggcc
acgaagaagcacgaggccatcgagacagacatcgccgcctatgaggagcgcgtgcaggcc
gtggtggccgtggccagggagctagaggccgagaactaccatgacatcaagcgcatcacg
gcgaggaaggacaacgtcatccggctctgggagtacctgctggagttgctgcgggcgcgc
cggcagcgcctggagatgaacctggggctgcagaagatcttccaggagatgctctacatc
atggactggatggacgagatgaaggtgctgctgctgtcgcaggacttcggcaaacacctg
ctgggcgtggaggacctgctgcagaagcacgccctggtggaggcagacatcggcatccag
gccgagcgtgtgcgggccgtcaacgcctccgcccagaagttcgcagcggacggggaaggc
tacaagccctgcgacccgcaggtgatccgggaccgcgtggcccacatggagttctgctac
caggagctctgccagctggcggccgagcgccgggcgcgcctggaggagtcccgccgcctc
tggaagttcttctgggagatggcggaagaggagggctggatccgcgagaaggagaagatc
ctgtcgtccgacgactacggccgcgacctgaccagcgtcgtgcggctgctcagccagcac
cgcgccttcgaggacgagatgagcggccgcagcggccatctggagcagaccatcagggag
ggcgaggccatgatcaccgagcagcacttcggcttcgagaagacgcgggaacgcatcgcc
gatgtccgcgagcagtgggccagcctgggccgcctggctgccgtgcgcaagcggcgcctg
gaggaggccctgctgctgcaccagttccaggcggacgccgacgacgtggacgcctggatg
ctggacatcctcaagattgtgtctagcagcgacgtgggccacgacgagtactccacgcag
tcgctggtgaagaaacacaaggacgtggcggaggagatcgccaactaccggccggccatc
gacgcgctgcacgagcaggcaggcgcgctgccgcctgagcacgccgagagccccgcggtc
agggcccggctggccggcgtcgaggagcgctacaaggaggtggccgagctgacgcggctg
cgcaagcaggccctgcaggacacgctggcactctacaagatgttcaatgaggccgacgcc
tgcgagctctggatcgacgagaaggagcagtggctggacagcatgcagatccctgagaag
ctggaggacctggaggtcatccagcacaggttcgagagcctggagcccgagatgaacagc
caggcctcccgagtggctgtggtcaaccagatcgcccggcagctgatgcacagcggccac
ccgagcgagaaggacatcaaagcccagcaggacaaactgaacacaaggtggagccagttc
agggagctggtcgaccgcaagaaggatgcgcttctctcggccctgagcatccagaactac
cacctcgagtgcaacgagaccaagtcctggatccgggagaagaccaaggtgatcgagtcc
acccaggacctgggcaacgacctggcaggtgtgatggccctgcagcgcaagctgaccggc
atggagcgggacttggtggccatcgaggcgaagctgagcgacctgcagaaggaggcagag
aaactggagtcagagcacccggaccaggcgcaggccatcctgtcgcggctggccgagatc
ggcggcgtgtgggaggagatgaggaccgcgctccggaaccgcgaggcctcgctgggggag
gccagcaagctgcagcagtttctgcgggacctggacgacttccagtcctggctgtcgcgc
acgcagacggccatcgcctcggaggacatgcccaacacgctggccgaggccgagaagctg
ctcacacagcacgagaacatcaagaacgagatcgacaactacgaggaggactaccagaag
atgcgggacatgggcgagatggtcacccagggccagaccgacgcccagtacatgttcctg
cgccagcggctgcaggcgctggacacgggctggaacgagctgcacaggatgtgggagaac
aggcagagcctcctgtcccagtcgcacgcctaccagcagtttctgcgggacacaaagcag
gctgaggccttcctcaacaaccaggagtacgtcctggcccacactgagatgccggccact
ctggagggtgccgaggccgccatccgcaagcaggaggacttcatgaccaccatggacgcc
aacgaggagaagatcagcgccgtggtggagtcgggccgcaggctgctgagcgccggcaat
gtcagctcggaccgcatccaggagaaggtggactccatcgacgacagacacaggaagaac
cgagaggcggccagcgagctcctgatgcggctgaaggacaacagggacctccagaagttc
ctgcaggactgtcaggagctctctctctggatcaatgagaagatgctcactgcccaggac
atgtcttacgacgaagcccgaaacctgcacagtaaatggctgaagcaccaggcgttcatg
gcggaactcgcctccaacaaagaatggctggacaagatcgagaaggaaggaatgcagctc
atttctgaaaagccagagacggaagccgtggtgaaggagaaactcactggtttacacaaa
atgtgggaagtccttgaatccaccacccagactaaggcccagcggctctttgatgccaac
aaggcggaacttttcacccagagctgtgcagacctggacaaatggctgcacgggctggag
acccagatccagtctgacgactacggcaaggacctcaccagcgtcaacattctgctcaaa
aagcagcagatgctggagaaccagatggaggtaaggaagaaggagatcgaagagctgcag
agccaggcccaggccctgagccaggagggcaagagcacggatgaggtggacagcaagcgg
ctgaccgtgcagaccaagttccgggagctgctggagccgctgaccgagaggaagcagtac
ctgctggcctccaaggagatccaccagttcaaccgggacgtggaggatgaaatcctatgg
gtcggagagcgcatgcctctggccacgtccacggaccacggccacaacttgcagaccgtg
cagctcctcatcaagaagaaccagacccttcagaaggagatccagggccaccagccgcgc
atcgacgacatcttcgagcggagccagagcatcgtgacagccagcagccccaacgccgag
gccatccggcagcggctagccgacctgaagcagctgtgggggcagctcatggccgagaca
gagaagcggcacacgcggctagaggaggcgcaccgcgcccagcagtactacttcgatgcg
gccgaggccgaggcctggatgagtgagcaggagctgtacatgatgtcggaggagaaggcc
aaggacgagcagagcgccgtgtccatgctgaagaagcaccagattctggagcaggccgtg
gaagactacgcggagaccgtgcaccagctgtccaccaccagccgcgccctcgtggccgag
ggccaccccgaaagcgagcgcatcagcatgcggcagtccaaggtggacaaactgtatgcg
ggcctgaaggacctcgccgaggagaggaggggcaagctggacgagcggcaccggctgttc
cagctcaaccgggaggtggacgacctggagcagtggatcgccgagagggaggtggtcgcg
ggctcccatgagctggggcaggactacgagcacgtcacgatgctccaggaacggttccga
gagttcgcccgggacacggggaacatcgggcaggagcgagtggacacagtgaaccacatg
gcggacgagctcatcaattcgggccactcggacgcggccaccatcgccgagtggaaggac
ggactcaacgaggcctgggccgacctcctggagctcatcgacaccaggacgcagatcctc
gccgcctcctacgagctgcacaagttctaccacgacgccaaggagatcttcgggcgtatc
caggacaagcacaagaagctccccgaggagctggggcgggaccagaacaccgtggagacg
ttgcagaggatgcacaccaccttcgagcacgacatccaggccctgggcacacaggtgcgg
cagctgcaggaggatgcggcccgcctccaggcagcctatgccggcgacaaggccgatgac
atccagaagcgggagaacgaggttctggaagcctggaaggctctcctggacgcctgtgag
ggccgcagggtgcgactgctggacacaggggacaagttccgcttcttcagcatggtgcgg
gatctcatgctgtggatggacgacgtcatccggcagatcgaggcccaggagaagcccagg
gatgtgtcatctgttgagctgttaatgaataatcatcaaggtatcaaagctgagatcgat
gctcggaatgacagtttcacaacctgcattgagcttgggaaatccctgctggcaagaaag
cactatgcatcagaggagatcaaggaaaagttgctgcagctgacggaaaagagaaaagaa
atgattgacaagtgggaggaccgatgggaatggctccgactgatactggaggtccatcag
ttctcgcgggacgccagcgtggccgaggcctggctgctggggcaggagccgtacctgtcc
agccgggaaatcggccagagtgtggacgaggtggagaagctcatcaagcggcacgaagcc
ttcgagaagtcggccgccacctgggacgagcgcttctctgccctggaaaggctgacgaca
ttggagttactggaagtgcgtagacagcaagaggaagaggagaggaaacgacggcccccg
tctccggagcagagcacgaaggtttccgaggaggccgagtcccagcagtgggacgcttcc
aaaggagaacccgtgtcccataacggcttgccggctgaccagggatctccacggatgaca
gacaagggggacatgagcgaattggtcaacggcgccgcagagcagaggacaagctcgaag
gagtccagccccatcccctccccaacgtccgaccgcaaagccaagaccggcctcacagcc
cagggcgcggccaccctcccggcccggacgcaggacgctccctctgcccagatggaaggc
ttcctgaaccggaagcatgagtgggaggcccacaacaagaaggcctcaagcagatcctgg
cacaacgtctactgcgtcatcaacaaccaggaaatgggtttctacaaggacgcgaagacg
gcggcctccggggtgccctaccacagcgaggtccccgtgagtctgagggaagctgtctgc
gaggtggcgcttgactacaagaagaagaaacatgtgttcaagctcagactgagcgatggc
aacgagtacctcttccaagccaaagacgacgaggaaatgaacgcgtggatccaggccatc
tcctctgccatcgccgacaagcacgaggtggccgccagcacccagagcacgccggcgtcc
agccgggcacagaccctgcccaccagcgtcgtcaccatcaccagcgagtccagtcccggc
aagcgggagaaggacaaagagaaagacaaagagaagcggtttagcctgtttggcaaaaag
aagtga
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integrated database retrieval system
