Sorex araneus (European shrew): 101546799
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Entry
101546799 CDS
T07854
Symbol
GTF2H1
Name
(RefSeq) general transcription factor IIH subunit 1
KO
K03141
transcription initiation factor TFIIH subunit 1
Organism
sara
Sorex araneus (European shrew)
Pathway
sara03022
Basal transcription factors
sara03420
Nucleotide excision repair
sara05203
Viral carcinogenesis
Brite
KEGG Orthology (KO) [BR:
sara00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
101546799 (GTF2H1)
09124 Replication and repair
03420 Nucleotide excision repair
101546799 (GTF2H1)
09160 Human Diseases
09161 Cancer: overview
05203 Viral carcinogenesis
101546799 (GTF2H1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sara03021
]
101546799 (GTF2H1)
03400 DNA repair and recombination proteins [BR:
sara03400
]
101546799 (GTF2H1)
Transcription machinery [BR:
sara03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
101546799 (GTF2H1)
DNA repair and recombination proteins [BR:
sara03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
101546799 (GTF2H1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PH_TFIIH
BSD
GeBP-like_C
Motif
Other DBs
NCBI-GeneID:
101546799
NCBI-ProteinID:
XP_004607893
LinkDB
All DBs
Position
Unknown
AA seq
548 aa
AA seq
DB search
MATSSEEVLLIVKKVRQKKQDGALYLMAERIAWAPEGKDRFTISHMYADIKCQKISPEGK
AKIQLQLVLHAGDTTNFHFSNESTAVKERDAVKDLLQQLLPKFKRKANKELEEKNRMLQE
DPVLFQLYKDLVVSQVISAEEFWANRLNVNATESSSTTNHKQDVGISAAFLSDVRPQTDG
CNGLKYNLTSDIIESIFRTYPAVKMKYAENVPHNMTEKEFWTRFFQSHYFHRDRLNTGSK
DLFAECAKIDEKGLKTMVSLGVKNPLLDLTALEDKPLDEGYGISSVPSTSNSKSLKENSN
AAIIKRFNHHSAMVLAAGLRKQEAQNEQNGEPSGMDKNCGDADCFQPAVKRAKLQESIEY
EDLGKNNSVKTIALNLQKSDRYYHGPTPIQSLQYATSQDIINSFQSIRQEMEAYTPKLTQ
VLSSSAASSTIAALSPGGALMQGGTQQAINQMVPNDIQSELKHLYVAVGELLRHFWSCFP
VNTPFLEEKVVKMKSNLERFQVTKLCPFQEKIRRQYLSTNLVSHIEEMLQTAYNKLHTWQ
SRRLMKKT
NT seq
1647 nt
NT seq
+upstream
nt +downstream
nt
atggcaacttcatctgaagaagttttgctgattgtaaagaaagtgcggcaaaagaagcag
gatggagcactatacctcatggcagaaagaattgcttgggcacctgaagggaaggacaga
tttacaatcagccatatgtatgcagatataaaatgtcagaaaattagtccagaaggaaaa
gctaaaattcaacttcaactggtcctgcatgcaggggatacaactaactttcatttttcc
aatgagagcacggcagtgaaagaaagagatgccgtgaaagatcttcttcaacagttgcta
cctaaattcaagaggaaagcaaataaagaactggaagaaaaaaacaggatgctgcaagaa
gatccagttttgtttcagctttataaagatcttgtcgtgagtcaagtgatcagtgctgag
gaattctgggccaaccgtttaaatgtgaatgcaacagaaagttcctccacaaccaatcat
aagcaggatgttggcatttctgcagcatttttgtctgatgttcgaccccaaacagatgga
tgtaatggtctaaaatacaatttaacctctgatatcattgagtctatatttaggacctat
ccagcagtaaaaatgaaatatgcagaaaatgttcctcacaacatgacagaaaaggaattc
tggacgcgttttttccagtcccattattttcacagggaccgtctgaatacagggtcaaag
gacctctttgcagaatgtgccaaaatagatgaaaaggggttaaaaacaatggtttcatta
ggagtgaaaaatccactacttgatttgacagctttggaagataaaccattggatgaagga
tatggcatttcctctgtgccatcgacttcaaattccaaatctctaaaagagaatagcaat
gctgccatcatcaagaggtttaaccatcacagtgccatggttctggcagcaggtctcagg
aaacaagaagcacaaaatgaacaaaatggtgagcccagcggcatggacaaaaattgtgga
gatgcagattgctttcagcccgcagtcaaaagggcaaagttacaagagtccattgaatat
gaagacttggggaaaaataattccgtaaaaacaattgcactaaacctccagaagtcagat
aggtattaccatggtcctactccaatccagtctctacagtatgcaacaagtcaagatatt
attaattcttttcaaagtattagacaagaaatggaagcttatacacctaaattaactcag
gttctctcaagtagtgctgccagcagtaccatcgcagccctatcacctggaggagcactt
atgcagggagggacacagcaagccataaaccagatggtgccaaatgatattcagtctgaa
ttgaaacacctgtatgtagctgttggcgaacttctccggcacttctggtcctgctttcct
gttaatacaccattcctagaagaaaaggtagtgaaaatgaaaagtaatttggaacgattt
caagttacaaagctttgcccattccaagagaaaattcggagacagtatttaagcacaaat
ttggtaagtcacatagaggagatgctgcagacagcctacaacaagctccacacgtggcag
tcacggcgtctgatgaagaaaacgtga
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