Sorex araneus (European shrew): 101546813
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Entry
101546813 CDS
T07854
Symbol
SLIT3
Name
(RefSeq) slit homolog 3 protein
KO
K06850
slit 3
Organism
sara
Sorex araneus (European shrew)
Pathway
sara04360
Axon guidance
Brite
KEGG Orthology (KO) [BR:
sara00001
]
09150 Organismal Systems
09158 Development and regeneration
04360 Axon guidance
101546813 (SLIT3)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
sara00536
]
101546813 (SLIT3)
Glycosaminoglycan binding proteins [BR:
sara00536
]
Heparan sulfate / Heparin
Axon guidance molecules
101546813 (SLIT3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
EGF
Laminin_G_2
hEGF
LRRNT
Laminin_G_1
LRR_9
LRRCT
LRR_14
EGF_Teneurin
EGF_TEN
LRR_EndoS
LRR_NXF1-5
EGF_CA
EGF_DL_JAG
EGF_3
JAG1-like_EGF2
EGF_2
cEGF
Laminin_G_3
Motif
Other DBs
NCBI-GeneID:
101546813
NCBI-ProteinID:
XP_012788868
LinkDB
All DBs
Position
Unknown
AA seq
1476 aa
AA seq
DB search
MARCTCSAASVDCHGLGLRAVPRGIPRNAERLDLDRNNITRITKTDFAGLKNLRVLHLED
NQVSVIERGAFQDLKQLERLRLNKNKLQVLPELLFQSTPKLTRLDLSENQILGIPRKAFR
GIADVKNLAHPSHSLSVGAVDIVPMALMSVDIVHVTPVSVGATTLNNNNISHILVTSFNH
MPKIRTLRLHSNNLLCDCHLAWLSDWLRQRRAIGQFTLCMAPVHLRGFSVADVQKKEYVC
AGPHSEPPTCNANSISCPSACTCSNNIVDCRGKGLTEIPANLPEGIVEIRLEQNSIKSIP
AGAFTPYKKLKRIDISKNQISDIAPDAFQGLKSLTSLVLYGNKISEIPKELFSGLVSLQL
LLLNANKINCLRVSTFQDLRSLSLLSLYDNKLQTISKGLFAPLQAIQTLHLAQNPFVCDC
HLKWLAEFLQDNPIETSGARCSGPRRLANKRIGQIKSKKFRCSGSEDYRSRFSSSCFMDL
VCPEKCRCEGTVVDCSNQKLSRIPSHLPEYVTDLRLNDNEISVLEATGIFKKLPNLRKIN
LSNNKIKEVREGAFDGAASVQELMLTGNQLETVHGRMFRGLSGLKTLMLRSNLLSCVSND
TFAGLSSVRLLSLYDNRLSTIAPGAFTTLVSLSTINLLSNPFNCNCHLAWLGKWLRRRRV
VSGNPRCQRPFFLKEIPIQDVAIQDFTCEGNDENSCRLGPRCPAQCTCVDTVVRCSNQGL
RVLPKGIPKDVTELYLEGNHLAAVPRELSALRHLTLIDLSNNSIGVLANYTFRNMSHLST
LILSYNRLRCIPLHAFDGLRSLRVLTLHGNDISSVPEGSFKDLTSLSHLALGTNPLHCDC
SLRWLSEWVKAGFKEPGIARCSTPEPMADRLLLTTPTHRFQCKGPVDISIAAKCDACLSG
PCRNNGTCTQDPVEHFRCACPYGYKGRDCSVPINTCVQNPCQHGATCLLSDAHKEGFRYR
PLWAVWAPPRTEAPTSSRGLCELCDEVVDPCVPELNLCQNHAKCVSLDRGFRCECSPGYS
GKLCEVDVDECAGHQCQHGARCVDAVNGYTCICPQGFSGPLCEQPPPMVLLQTSPCDQHE
CQNGAPCVLVQQEPVCRCPPGFAGPRCEKLVTVNFGGKDSYVELASAKVRPQANISLQVA
TDKDNGILLYKGDNDPLALELYQGHVRLVYDSLSSPPTTVYSVETVNDGQFHSVELVMLN
QTLNLVVDKGAPKSLGKLQKQPAVGSNSPLYLGGIPMSTGLSALRQGADRPLGGFHGCIG
EVRINNELQGFKALPPPSLGVSPGCKSCSVCRHGLCRALEKDSVACECHPGWTGPLCDQE
ARDPCRDHGCVHGKCVATGSSYTCQCAEGYSGVLCDHRNDSAGPCAASKCQHGQCHVSEQ
GEPQCVCQPGFRGQFCEQXXPCRGELVRDVIRRQKGYAACATASRVPTVRCGGGCGAQCC
GPTRSRRRKYVFQCSDGSSLVAEVERHLECGCAPCA
NT seq
4431 nt
NT seq
+upstream
nt +downstream
nt
atggcaagatgtacctgctccgccgccagcgtggactgccacgggctgggcctccgggcg
gtgcctcggggcatcccccgcaacgccgagcgccttgacctggacagaaataacatcacc
aggatcaccaagacggacttcgctggactcaagaacctccgagtcttgcatctggaagac
aaccaggtcagcgtcatcgagagaggcgccttccaggatctgaagcagctggagcgactg
cgcctgaacaagaacaagctccaagtcctcccggaattgcttttccagagcacgccgaaa
ctcaccagactggacctgagcgagaaccagatcctgggcatcccgcggaaggccttccgg
ggcatcgccgacgtcaagaacctagctcatccttctcattccctgtctgtgggcgccgtg
gacattgtgcccatggccctcatgtctgtggacatcgtgcacgtgacccccgtatctgtg
ggtgccaccaccctcaacaacaacaacatcagccacatcctggtcaccagcttcaaccac
atgccgaagatccggacgctgcgcctgcactccaacaacctcctgtgcgactgtcacctg
gcctggctgtcggactggctgcggcagcgacgggccatcggccagttcaccctgtgcatg
gcccccgtgcacctgcggggcttcagcgtggccgacgtgcagaagaaggagtacgtgtgt
gcaggcccccactcggagccgcccacctgcaacgccaactccatctcgtgcccctcggcc
tgtacctgcagcaacaacatcgtggactgccgcgggaaggggctgaccgagatccctgcc
aacctgcccgagggcatcgtggagatacgcctggagcagaactccatcaaatccatcccc
gccggagccttcaccccatacaagaagctgaagcgcatagacatcagcaagaatcagatc
tccgacatcgccccggacgccttccagggtctgaagtccctgacgtcgctggttctctac
gggaacaagatctccgagatccccaaggagctgtttagcgggctggtgtcgctgcagctg
ctcctcctgaacgccaacaagatcaactgcctccgcgtgagcaccttccaggacctgcgc
agcctcagcctgctgtccctgtacgacaacaagctgcagaccatcagcaaggggctcttc
gccccgctgcaggccatccagaccctccacctggcccagaacccgttcgtgtgtgactgc
cacctgaagtggctggccgagttcctccaggacaaccccatcgagaccagcggcgcccgc
tgcagcggcccccgccgcctggccaacaagcgcatcggccagatcaagagcaagaagttc
cgctgctcaggctcggaggattaccgcagccgcttcagcagctcgtgcttcatggacctc
gtgtgccccgagaagtgccgctgcgagggcaccgtcgtggactgctccaaccagaagctg
tcccgcatccccagccacctccccgaatacgtcaccgacctgcggctgaatgacaatgag
atctcagtgctggaggccacgggcatcttcaagaagcttcccaacctgcggaagataaac
ctgagtaacaataaaatcaaggaggtgagagagggcgccttcgacggggcggccagcgtg
caggagctgatgctgaccgggaaccagctggagaccgtgcacggacgcatgttccgcggc
ctcagcggcctgaagaccctgatgctgcggagtaacctgctcagctgcgtgagcaacgac
acgttcgcaggcctgagctccgtgcggctgctgtccctgtacgacaaccggctcagcacc
atcgcgcccggcgccttcaccacgctcgtctccctctccaccataaacctcctgtccaac
cccttcaactgcaactgccacctggcctggctgggcaagtggctccggaggcggcgggtg
gtgagcgggaatccgcgttgccagaggcccttcttcctcaaggagatccccatccaggac
gtggccatccaggacttcacctgcgaaggcaacgacgagaacagctgccggctgggccct
cgctgcccggcgcagtgcacctgtgtggacacggtggtgcgatgcagcaaccagggcctg
cgcgtgctgcccaagggcatccccaaggacgtgacggagctgtacctggaagggaaccac
ctagcggccgtgccccgggagctctcggccctgcggcacctcaccctgattgacctgagc
aacaacagcatcggggtgctggccaactacaccttccggaacatgtctcacctctccacc
ttgatcctgagctacaaccggctgcgctgcatccccctgcacgccttcgacgggctgcgc
tccctgcgcgtgctgaccctccacggcaacgacatttccagtgtccccgagggctccttc
aaggacctgacttcgctctcccacctggcgctgggcaccaaccccctgcactgcgactgc
agcctgcgctggctctccgagtgggtgaaggcgggcttcaaggagccaggcatcgcccgc
tgcagcacccccgagcccatggccgaccggctgctgctcaccacccccacccaccgcttc
cagtgcaaaggccccgtggacatcagcatcgcggccaagtgcgacgcctgcctctcgggc
ccctgcaggaacaacggcacttgcacccaggacccagtggagcatttccgctgtgcctgc
ccctatgggtacaagggccgcgactgctcggtgcccatcaacacctgcgtccagaacccg
tgccagcacggagccacctgcctgctgagcgacgcccacaaggagggcttcaggtaccgc
cccctctgggcagtctgggccccgccccgcacggaggcgcctaccagctcccgggggctc
tgtgaactgtgcgatgaggtggtagatccctgcgtgcccgagctgaacctgtgtcagaac
cacgccaagtgcgtctctctggaccggggcttcaggtgtgagtgttccccgggctacagc
gggaagctgtgtgaggtggacgtggacgagtgcgccgggcaccagtgccagcacggcgcc
cgctgcgtggacgcggtcaacggctacacctgcatctgcccccagggcttcagcggcccc
ttgtgcgagcagcccccgcccatggtgctgctgcagaccagcccgtgtgaccagcacgag
tgccagaacggggcgccctgcgtcctggtgcagcaggagcccgtctgccgctgccccccg
ggcttcgccggcccccgctgcgagaagctcgtcaccgtcaacttcgggggcaaggactcg
tacgtggaactggcctccgccaaggtccggccccaggccaacatctccctgcaggtggcc
accgacaaggacaacggaatcctgctgtacaaaggggacaatgacccgctggcgctggag
ctgtaccagggccacgtgcggctggtgtacgacagcctgagctccccgcccaccaccgtg
tacagcgtggagacggtgaatgacgggcagttccacagcgtggagctggtgatgctcaac
cagaccctgaacctggtggtggacaaaggcgcccccaagagcctgggcaagctccagaag
cagccggccgtgggcagcaacagcccgctctacctgggaggcatccctatgtccacgggc
ctctcggccctgcgccagggcgccgaccggccgctgggcggcttccacggctgcatcggc
gaggtgcgcatcaacaacgagctgcagggcttcaaggcgctgccgccgccgtcgctgggg
gtgtcgcccggctgcaagtcgtgctccgtgtgccgccacgggctgtgccgcgcgctggag
aaggacagcgtggcgtgcgagtgccacccgggctggaccggcccgctctgcgaccaggag
gcccgcgacccgtgccgcgaccacggctgcgtccacgggaaatgcgtggccacgggctcc
tcgtacacctgccagtgcgccgagggctacagcggcgtcctgtgcgaccacaggaacgac
tccgccgggccctgcgccgcctccaagtgccagcacgggcagtgccacgtctcggagcaa
ggggagccacagtgcgtgtgccagcccggcttccgtgggcagttctgcgagcaannnnnn
ccgtgccgcggggagctggtgcgggacgtgatccggcggcagaagggctacgcggcgtgc
gccacggcgtcccgggtgcccacggtgcggtgcggcggcggctgcggggcgcagtgctgc
gggcctacgcgcagccggcggcgcaagtacgtgttccagtgctcggacggctcgtcgctg
gtggccgaggtggagcgccacctggagtgcggctgcgcgccctgcgcctag
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