Sorex araneus (European shrew): 101546851
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Entry
101546851 CDS
T07854
Symbol
SYNPO
Name
(RefSeq) synaptopodin
KO
K21112
synaptopodin
Organism
sara
Sorex araneus (European shrew)
Pathway
sara04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
sara00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
101546851 (SYNPO)
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Ortholog
Paralog
GFIT
Motif
Pfam:
Calsarcin
Motif
Other DBs
NCBI-GeneID:
101546851
NCBI-ProteinID:
XP_004620670
LinkDB
All DBs
Position
Unknown
AA seq
928 aa
AA seq
DB search
MLDPHIPPPPLGPSEGTPAPGTFRIPDGSYRCLALEAEESGGEDGVQGEGAPEGLKGEPG
APRSGDHLASGASQGTARLPRVLGTHTPSWPREARGDAPWDGLSTQDWDPAKARRTPSSP
SPSPGPRDVQKAALVRSTSLTERNLKEAKVRSQQIAAQLTTPPSGGSRGVQLFNRRRQRV
NEFTSESHGQSGQKASQGPLRVSTASAAGHVPGLSLSPGPLPPAPPPSDSDGGTPSHSME
GCSEETGLLRQLDKVASEEEEVPLVVYLKENAALLTANGLHLSQNREAQQAPSTPPLTEV
PSPVADVNQNLSSPGTALVTPAANSNHVLPAADVNQNPPALLAPQSPALPSVQQNSLEAP
PKGTVPDAQPGNLGARGQPQEAAMEVRPSVLLMENVFTPPTTTSTFCREAPPISSFGPPA
TDFMSSSLLIDIQPRASRAEQEMPGQAAATTPTKMYSEVHLMLAKPPSVVNRTARPFGVQ
APGTPGQVERSPMLERRYFGEKAETPQPYTMADRSPRPQRHVMAPSPMLGRRPVGQRSPA
LERRPLGNFTPPPTYAETLSTAPPASQVRSPPSYAALYPSSDPKLSHPKGQAVPASKTGI
LEESMARRGSRKSMFTFVEKPKVTPNPDLLDLVQTADEKRRQRDQGDVAAEEEPFALGAE
ASNFQAEPSTRDRASPAAAEDTVPEWASCLKSPRIQAKPKPKPNQNLSEASGKGAELYAR
RQSRMEKYVIESSGHPELARCPSPTMSLPSSWKYSTSGPGGFRVASLSPARTPPASLYHG
YLPENGVLRPEPTRQPPHQLRSSLFVLSPLKEPVRAPSRSASPRATSSRAASPAKPSSLD
LVPSLPKAAYPTSPALPRASRSSPGLYAPSGQDGLQPTSGSPTYSTDVSPVSPSRAWSPR
AKQAPRPSFSTRNAGIEAQVWKPSFCFK
NT seq
2787 nt
NT seq
+upstream
nt +downstream
nt
atgctggacccccacatcccgcctccgcccctgggccccagcgaaggcacgcctgccccc
ggcaccttccggatccctgacgggagctacaggtgtctggccctggaggccgaggagagt
gggggggaggacggcgtgcagggggagggggcgcctgagggcctgaagggagagccagga
gccccgaggagcggggaccatcttgcctctggagccagccaagggacagcccgactgccg
agagtcctaggcacccacacgcccagctggcccagagaggcacgaggggacgccccatgg
gatggcctgtccacccaggactgggacccggcgaaggcccggaggacgccgtccagcccc
agccccagccctgggccccgggatgtccagaaagcagccttggtccggagcaccagcctc
actgagaggaacctgaaagaagccaaggtccggagccagcagatcgcggcgcagctgacc
accccgcccagcggcggctcccgcggcgtccagctcttcaacaggcgccggcagagggtc
aacgagttcacctcggagagccacggccagagtggacagaaggccagccagggccccctc
agggtctccactgccagcgccgcaggccatgtcccggggctcagcctgagtcccgggcca
ctcccccctgccccgccccccagcgactctgacggagggacccccagccacagcatggag
ggctgctcagaggagacgggcctgctgcggcagctggacaaggtggccagcgaggaggag
gaggttcctctggtggtttatttaaaggagaacgccgccctgctgacggccaacgggctg
cacctctcccagaaccgagaagcccagcaggccccgtcaaccccaccgctgaccgaggtc
cccagcccggtggcggacgtcaaccaaaacctctcctcgcctggcacggctctcgtcacc
ccagccgctaacagcaaccacgtcctgccggccgcagacgtcaaccagaacccgccggcc
ctgctggccccgcagagccccgccctccccagcgtccagcagaattctctggaggccccg
cccaagggcactgtgcccgatgcccagcctggcaacctgggtgccagagggcagccccag
gaggcggccatggaggtgaggcccagcgtcctcctcatggagaacgtcttcactccgccc
accaccaccagcaccttctgcagggaggcgccccccatctccagcttcgggccccccgcc
acagacttcatgtccagctctctcctcatcgacatacagcctagggcctcccgggcggag
caggagatgcccgggcaggccgcggccaccacccccaccaagatgtacagtgaggtccac
ctcatgctggccaagcccccgtcagtggtcaacaggacggccaggccctttggggtccag
gccccagggacccccggccaggtggagcggagccccatgctggagagacggtacttcgga
gagaaggctgagactccccagccgtacaccatggccgacaggagcccccggccacagcga
cacgtgatggcccccagccccatgctggggaggaggccggtggggcagcgaagcccggcc
ctggagagacgccccttgggaaacttcaccccgccccccacctacgcggagaccttgtcc
acagcgcccccggcttcccaagtgaggtctccgccctcctacgcggccctgtaccccagc
tccgaccccaagctttctcatccgaaaggccaggccgtccctgccagtaagacgggcatc
ctggaggagtcgatggcccgccggggcagccggaagtccatgttcacctttgtggagaag
cccaaggtgaccccgaaccccgatctgctggacctggtccagacggccgatgagaagcgg
cggcagagggaccagggggacgtggccgcggaggaggagcccttcgccctgggggccgaa
gcctccaacttccaggccgagccgtccacccgggacagggccagccctgcggccgcagag
gacacagtcccggagtgggcctcgtgcctcaagtctccgcgcatccaggccaagcccaag
cccaaacctaaccagaacctctcggaggcgtccgggaagggggccgagctctacgcccgc
cgccagtcccggatggagaagtatgtcattgagtcctccggccacccggagctggcccgc
tgcccgtcgcccaccatgtccctgccttcctcctggaaatactccaccagtggccccggg
ggcttccgagtggcctccctcagcccggcccggacgccgcccgcctccctctaccacggc
tacctgcccgagaacggggtcctgcgccccgagcccaccaggcagcccccccaccagctg
cggtcctcgctctttgtgctctccccgctcaaggagccggtcagggccccctcgagatct
gcctcgcccagggccacctcttccagagccgcctccccggccaagccgagctccctggac
ctggtgcccagcctgcccaaggcggcctacccgacatcgccagccctgcctcgggcctcc
cgctcctctcctgggctctacgccccatcgggccaggacggcctgcagcccacctctggg
agccccacctacagcaccgacgtctcccccgtgtcgccttcccgggcgtggtctccccga
gccaagcaggctccccggccctccttctccacccgcaacgctgggatcgaggctcaggtg
tggaagccatccttctgcttcaagtaa
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