Sorex araneus (European shrew): 101547133
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Entry
101547133 CDS
T07854
Symbol
CACNA1H
Name
(RefSeq) voltage-dependent T-type calcium channel subunit alpha-1H
KO
K04855
voltage-dependent calcium channel T type alpha-1H
Organism
sara
Sorex araneus (European shrew)
Pathway
sara04010
MAPK signaling pathway
sara04020
Calcium signaling pathway
sara04713
Circadian entrainment
sara04925
Aldosterone synthesis and secretion
sara04927
Cortisol synthesis and secretion
sara04929
GnRH secretion
sara04934
Cushing syndrome
Brite
KEGG Orthology (KO) [BR:
sara00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
101547133 (CACNA1H)
04020 Calcium signaling pathway
101547133 (CACNA1H)
09150 Organismal Systems
09152 Endocrine system
04929 GnRH secretion
101547133 (CACNA1H)
04925 Aldosterone synthesis and secretion
101547133 (CACNA1H)
04927 Cortisol synthesis and secretion
101547133 (CACNA1H)
09159 Environmental adaptation
04713 Circadian entrainment
101547133 (CACNA1H)
09160 Human Diseases
09167 Endocrine and metabolic disease
04934 Cushing syndrome
101547133 (CACNA1H)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
sara04040
]
101547133 (CACNA1H)
Ion channels [BR:
sara04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
101547133 (CACNA1H)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
PKD_channel
Motif
Other DBs
NCBI-GeneID:
101547133
NCBI-ProteinID:
XP_004604489
LinkDB
All DBs
Position
Unknown
AA seq
2283 aa
AA seq
DB search
MRVDAPPRALCKYSRQDPTKKVLKPELLPRIQTPAGVCARPGPLETVLAPAGRCGGQPAD
SLFRAASGLRFLSLTALCLARGGGGSSRGMRVAQHKGRTQEGLIPGQATISGCLPQAGLQ
CCTWFEHVSMLVIMLNCVTLGLFRPCEDVECRSERCSTLEAFDDFIFAFFAVEMVIKMIA
LGLFGQKCYLGDTWNRLDFFIVMAGMMEYSLDGHNVSLSAIRTVRVLRPLRAINRVPSMR
ILVTLLLDTLPMLGNVLLLCFFVFFIFGIVGVQLWAGLLRNRCFMDSTFVRNNNLTFLQP
YYMPEEGEENPFICSTRRDNGMQKCSHIPSRRELRVECTLGWEAYGQPGESLGPGRNACI
NWNQYYNVCRSGDSNPHNGAINFDNIGYAWIAIFQVITLEGWVDIMYYVMDAHSFYNFIY
FILLIIVGSFFMINLCLVVIATQFSETKQREHQLMREQRARYLSNDSTLASFSEPGSCYE
ELLKYVGHICRKLRRRGLRLCARWQSRWRKKVDPTNVPHGQGSGRRRSRGRHAASVHHLV
YHHHHHHYHLSHSSPRRPGPEPTALDSRLVPAGASSSPGPRPDAESVHSVYHADCHVERP
QERIQAVRAATAAASLKLAAGLGARNYPTILPSGMGGSKGGTGPKGTRAHGSPGTGGHSP
LSLSPSPCEKIQHLVGEHGLGRAPSRLSGLSVPCPLPSPQAGTLTCELGNCPYCARALDE
AELELSGSDSGDSGAEGVYEFTQDVQHGDRRDPLQQCPASATSPGSLRRRAQQRAAPSGQ
GGPGHVWGILSGKLRRVVDSKYFSRGIMVAILTNTLSMGVEYHEQPEELTNALEISNIVF
TSVFALEMLLKLLACGPLGYIRSPYNIFDGVIVVISVWEIVGQADGGLSVLRTFRLLRVL
KLVRFMPALRRQLVVLMRTMDNVATFCTLLMLFIFIFSILGMHLFGCKFSLKTDTGDTVP
DRKNFDSLLWAIVTVFQILTQEDWNVVLYNGMASTSSWAALYFVALMTFGNYVLFNLLVA
ILVEGFQAEGDANRSDTDEDKTSAHLEEDFDKLRGLGPADVKMYTLAVTPNGHLEAGGSL
PPPLIMRTAATPMPTPKNSPHLDAALGLLESRRGSSSSVDPQLGDQKSLSSLRSSPCTPW
GPNSAWSSRRCSRNSLGRAPSLKRRGQGGERESLLSGEGKGSTDDEAEDGRPGARSPQHA
KLQDCDGHMLALPSEFFLRVDGNKDDTGELDEDMEDSCCSRLRKVLEPYKPEWCRRREPC
ALYLFSPQNRFRVSCQKLIAHKLFDHVVLVFIFLNCITIALERPDIDPGSNERVFLSASN
YIFTAIFVAEMMVKVVALGLVSGEHAYLQSSWNVLDGLLVLVSLVDIIVAMASAGGAKIL
GILRVLRLLRTLRPLRVISRAPGLKLVVETLISSLRPIGNIVLICCAFFIIFGILGVQLF
KGKFYYCEGSDTRNISTKAECRAAHYRWVRRKYNFDNLGQALMSLFVLSSKDGWVNIMYD
GLDAVGIDQQPVPNHNPWMLLYFISFLLIVSFFVLNMFVGVVVENFHKCRQHQEAEEARQ
REEKRLRRLERKRRSTFPNPEAQRRPYYADYPPTRRSIHSLCTSHYLDLFITFIIGVNVI
TMSMEHYDQPKSLDEALKYCNYVFTIVFVIEAVLKLVAFGFRRFLKDRWNQLDLAIVLLS
IMGITLEEIEMSAALPINPTIIRIMRVLRIARVLKLLKMATGMRALLDTVVQALPQVGNL
GLLFMLLFFIYAALGVELFGRLECSEDNPCEGLSRHATFTNFGMAFLTLFRVSTGDNWNG
IMKDTLRECAREDKHCLGYLPAISPVYFVTFVLVAQFVLVNVVVAVLMKHLEESNKEARE
DAELDAELDAELELAPEPPARPPPATQESPPLLAVRKVSASRALSLPNDSYMFRPVVPAA
VPRPQPLQELELEVYTGAPSGSISSPHSPPASRWTSPQLDIPSVTTSPSSGRDALQAAAP
SPRGPAHSPSLSRLLCRQEAVCMDGEEGQADSSRDGSAGWAQSEGKDLSRGSSPHSPPCS
PRPTGTRARKPAPGQRGVPSLPPAPGGMEAPDPADEEVSHITSTAPPGPGAVGGFLELPG
RPSEPCWAPAELGGDAGPGAELASGARRKKKMSPPCISVEPPAEDDGAARPPGVEAGCST
LRRRTPSCEPAPHRDTQEPAEGLGTDPVPKGERRPHAPCRTEHLAVPNFAFESLDPSGDS
LLDTGHGAAAEPSTSSPGTTTPSEPPGPSRGSPERGRGPHLGVPQSSPSRGGTAPEDRTA
EPV
NT seq
6852 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgtggacgctccgcctcgtgccctgtgtaaatacagccggcaggacccgaccaaa
aaagtcctcaagcccgagctcctgcctcggatccagacgccggccggggtgtgcgcgcgg
ccaggccccctggagacggtactggcccctgcgggccgctgcggtgggcagccagcggac
agtttgttccgcgccgcctccggcctgcgcttcctctcgctgacagccctgtgtctggcc
agggggggcggcggaagctcgaggggaatgcgcgtggcccagcacaagggacgaactcag
gaaggcctgatccctggtcaggccactatatctggctgcctcccccaggctggcctccag
tgctgcacgtggttcgagcacgtcagcatgctcgtcatcatgctcaactgtgtcactctg
ggcctgttccggccctgtgaggacgtggagtgccgctcggagcgctgcagcaccctggag
gccttcgatgacttcatcttcgccttcttcgcggtggagatggtcataaagatgatcgcg
ctgggcctcttcgggcagaagtgttacctgggcgacacctggaacagactcgacttcttc
atcgtcatggcgggcatgatggaatactccctggacggacacaacgtgagcctctcggcc
atccgaacagtgcgcgtgttgcggccactccgcgccatcaaccgtgtgcccagcatgcgg
atcttggtcacgctgctgctggacactctgcccatgctgggcaatgttcttctactctgc
ttctttgtcttcttcatcttcggcatcgtgggtgtccagctctgggctggcctgctgcgc
aaccgctgcttcatggacagcacctttgtcaggaacaacaacctcaccttcctgcagcct
tactacatgccggaggagggcgaagagaaccccttcatctgctccacgcgccgggacaac
ggcatgcagaagtgctcgcatatccccagccgccgcgagctgcgtgtggagtgcacactg
ggctgggaggcgtacgggcagccgggcgagagcctgggccccggccgcaatgcctgcatc
aactggaaccagtattacaacgtctgccgttccggtgactccaacccccacaacggcgcc
atcaacttcgacaacatcggctatgcctggatcgccatcttccaggtgataacgctggag
ggctgggtggacatcatgtactacgtcatggacgcgcactccttctataacttcatctac
ttcattctgctcatcattgtgggctcctttttcatgatcaacctgtgcctggtggtgatc
gccacgcagttctcggagacgaagcaacgagagcaccagctgatgcgggagcagcgagca
cggtacctgtccaacgacagcacgctggccagcttctcggagccgggcagctgctacgag
gagctgctcaagtatgtgggccacatctgccgcaagctccggcgccgtggcctgcgcctc
tgtgcccgctggcagagccgctggcgcaagaaggtggacccgaccaacgtgccgcacggc
cagggctcggggcgccggcggtcgaggggccggcacgccgcctccgtgcaccacctggta
taccaccaccaccaccaccactaccacctcagccacagcagcccgcgccggcctggcccc
gagcccactgccctggacagcaggctggtgccagcgggggcatcctcctcacctggcccc
aggcccgatgccgagtcagtacacagcgtgtaccatgccgactgccatgtggaacggccg
caggagaggatccaggccgtgcgtgccgccaccgctgctgccagcctcaagctagccgca
gggctgggtgccaggaactaccctaccatcctgccctcaggcatgggcggcagcaaaggt
ggcactggacccaaggggacccgggcccacgggtctccgggcactggaggccacagcccc
ctgagtctgagccccagcccctgtgagaagattcagcacctggttggggagcacggtctg
ggccgggcccccagccgcctgtcgggcctgagtgtgccctgcccgctgcccagtccacag
gcaggcaccctcacctgtgagctgggcaactgcccctactgtgcccgagccctggacgag
gccgagctggagctgagtggctctgacagcggggactcgggagctgagggggtgtacgag
ttcacgcaggatgtgcagcatggagatcgccgggaccctctgcagcagtgccccgccagc
gcgaccagccccgggagcttgcggcggcgggcccagcagcgagcagcgcccagtgggcag
ggcgggccaggccacgtctggggcatcctcagcgggaagctgcgccgcgtcgtggacagc
aagtacttcagccgagggatcatggtggccatcctcaccaacacactcagcatgggcgtc
gagtaccacgagcagcccgaggagctgaccaacgccctggagatcagcaacatcgtgttc
accagcgtgttcgctctggagatgctgctgaagctgctggcctgcgggcctctcggctac
atccgcagcccctacaacatcttcgacggcgtcatcgtggtcatcagcgtctgggagatc
gtggggcaggcggacggcgggctgtcggtgctgcggaccttccggctgctgcgggtgctc
aagctggtgcgcttcatgcccgcgttgcggcggcagctggtggtgctcatgcgcaccatg
gacaacgtggccaccttctgcacgctgctcatgctcttcatcttcatcttcagcatcctc
ggcatgcatctcttcggctgcaagttcagcctgaagaccgacacgggggacaccgtcccc
gacaggaagaacttcgactcgctgctgtgggccattgtcaccgtgttccagatcctcacg
caggaggactggaacgtcgtcctctacaacggcatggcctccacctcctcctgggctgcc
ctctacttcgtggccctgatgacctttggcaactacgtgctcttcaacctgctggtggcc
atcctggtggagggcttccaggcggagggcgatgccaacaggtcagacacggatgaggac
aagacgtcagcccacctggaggaggatttcgacaagctccgaggcctggggcctgcggat
gtgaagatgtatacgctggcggtgacccccaatgggcacctggaagccgggggcagcctg
ccccctcccctcatcatgcgcactgcagccacgcccatgcccaccccgaagaactcccca
cacctggacgctgccctcggcctcctggagtctcgccgtgggagcagcagctctgtggac
ccccagctgggggaccagaagtcactgtccagtctccgcagctccccctgcaccccctgg
ggccccaacagcgcctggagcagccgtcgctgcagccgcaacagcctgggccgcgcgccc
agcctcaagcgccggggccagggcggcgagcgcgagtccctgctgtcgggcgagggcaag
ggcagcacggatgacgaggcggaggacggccggcccggcgcccgcagcccgcagcacgcc
aagctccaggactgcgacgggcacatgctggccctgcccagcgagttcttcctgcgcgtg
gacggcaacaaggacgacaccggggagctggacgaggacatggaggacagctgctgctcc
cgcctgcgcaaggtcctggagccctacaagcccgagtggtgccggcggcgggagccctgc
gccctgtacctcttctccccgcagaaccgcttccgggtctcctgccagaagctcatcgcc
cacaagcttttcgaccacgtggtcctggtcttcatcttcctcaactgcatcaccatcgcc
ctggagcggccagacatcgaccctggcagcaacgagcgcgtcttcctcagcgcctccaac
tacatcttcacggcgatctttgtggccgagatgatggtgaaggtggtggccctgggcctg
gtctccggcgagcacgcctacctgcagagcagctggaacgtgctggatgggctgctggtc
ttggtgtccctagtggacatcattgtggccatggcttctgccggtggcgccaagatcctg
ggcatcctgcgagtgctgcgcctgctgcggaccctcaggccgctgagggtcatcagccga
gccccgggcctgaagctggtggtggagacgctgatctcgtctctcaggcccatcgggaac
atcgtgctcatctgctgtgccttcttcatcatctttggcatcctgggcgtgcagctcttc
aaggggaagttctactactgcgagggctcggataccaggaacatctccaccaaggctgag
tgccgggctgcccactaccgctgggtgcggcgcaaatataacttcgacaacctgggccag
gccctgatgtccctgttcgtgctgtcgtccaaggacggctgggtgaacatcatgtacgac
ggactggacgctgtgggtatcgaccagcagcccgtgcccaaccacaacccctggatgctg
ctctacttcatctccttcctgctcatcgtcagcttcttcgtgctcaacatgttcgtgggc
gtagtggtggagaacttccacaagtgccggcagcaccaggaggccgaggaggcgcggcag
cgggaggagaaacggctgcggcggctagagagaaaacgccggagcactttccccaaccca
gaggcccagcgccggccctactacgcagactacccgcccacccgccgctccatccactcc
ttgtgcaccagccactacctggacctcttcatcaccttcatcatcggcgtgaacgtcatc
accatgtcgatggagcactacgaccagcccaagtccctggatgaggccctcaagtactgc
aactatgtcttcaccatcgtcttcgtcatcgaggccgtgctgaagctggtggccttcggc
ttccggagattcctcaaggacaggtggaaccagctggacctggccatcgtcctgctgtcc
atcatgggcatcacgctggaggagatcgagatgagcgcagcgctgcccatcaaccccacc
atcatccgcatcatgcgcgtgctgcgcatcgcccgcgtgctgaagctgctgaagatggcc
acgggcatgcgggctctgctggacacggtggtgcaggcgctgccccaggtagggaacctc
ggtctccttttcatgctcctgttttttatctatgctgccctgggagtggagctgttcgga
aggctcgagtgcagcgaggacaacccgtgtgagggcctgagccgccacgccaccttcacc
aacttcggcatggccttcctcacgctcttccgcgtgtccaccggggacaactggaacggc
atcatgaaggacacgctgcgcgagtgtgcccgggaggacaagcactgcctgggctacctg
cccgccatctcgcccgtctacttcgtcaccttcgtgctggtggcccagttcgtgctggtc
aacgtggtggtggccgtgctcatgaagcacctggaggagagcaacaaggaggcgcgggag
gatgccgagctggacgccgagctggacgccgagctggagctggccccggagccccctgcc
cggccgccgcccgcgacccaggagagccccccgctcctggccgtgcgcaaggtgtccgcg
tcccgggcactctcgctgcccaacgacagctacatgttccggccggtggtgcccgccgcg
gtccctcggccccagccgctgcaggagttggagctggaggtctacacaggtgccccctcg
ggctccatctcctccccacactcgccacccgccagccgctggacatccccgcagctggac
atcccctcggtcaccacctccccgtccagcggcagagacgccctccaggccgcggcccct
tccccccggggcccagctcacagccccagcctcagccggctgctctgcaggcaggaggct
gtgtgcatggacggcgaggaaggacaggcggacagctccagggacggctctgcgggctgg
gcacagtctgaagggaaggatctgtcccgggggtcctccccacactccccaccctgctcc
cccaggcccactggcacccgagcccgcaagcctgccccaggacagcgcggcgtccccagc
ctgcccccggcgccgggcggcatggaggccccagacccagctgacgaggaggtcagccac
atcaccagcacggcccccccaggacccggggcggtgggcggcttcctggagctgccgggg
cggccatcagagccgtgctgggcaccggcagagctgggcggggacgcggggccaggggct
gagctggcctcgggggcgcgccggaagaagaagatgagccccccttgcatctccgtggag
ccccccgcggaggacgacggcgcagcacggccccccggggtggaggctggctgcagcacc
ctccgccgcaggaccccgtcctgtgagccggccccccacagggacacccaggagcccgcc
gagggcctggggacggaccctgtccccaagggcgagcggcggccgcacgccccctgccgc
accgagcacctggccgtccccaattttgcctttgagagcctggaccccagtggggattcg
ctgctggacactggccatggggcggccgcagagcccagcacttccagcccagggaccacc
acgccctcggagccccccggtccctccaggggctccccagagcgggggcgagggccacac
ctcggtgttccccagagctcccccagcagaggagggacggcccctgaggaccgcacagct
gagcctgtgtag
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integrated database retrieval system
