Sorex araneus (European shrew): 101547135
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Entry
101547135 CDS
T07854
Symbol
SLC6A4
Name
(RefSeq) sodium-dependent serotonin transporter
KO
K05037
solute carrier family 6 (neurotransmitter transporter, serotonin) member 4
Organism
sara
Sorex araneus (European shrew)
Pathway
sara04082
Neuroactive ligand signaling
sara04721
Synaptic vesicle cycle
sara04726
Serotonergic synapse
Brite
KEGG Orthology (KO) [BR:
sara00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
101547135 (SLC6A4)
09150 Organismal Systems
09156 Nervous system
04726 Serotonergic synapse
101547135 (SLC6A4)
04721 Synaptic vesicle cycle
101547135 (SLC6A4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sara02000
]
101547135 (SLC6A4)
Transporters [BR:
sara02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
101547135 (SLC6A4)
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Ortholog
Paralog
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Motif
Pfam:
SNF
5HT_transport_N
Motif
Other DBs
NCBI-GeneID:
101547135
NCBI-ProteinID:
XP_004605058
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All DBs
Position
Unknown
AA seq
630 aa
AA seq
DB search
METTPLSSQKEPAVGTDGDDCQENGVLQKGVPGPGDKAESGQISNGYSAVPSPGAGDGVQ
HSAATATTALVAEAPAGERETWGKKVDFLLSVIGYAVDLGNVWRFPYICYQNGGGAFLLP
YTIMAIFGGIPLFYMELALGQYHRNGCISVWKKICPIFKGIGYAICIIAFYIASYYNTIM
AWALYYLISSFTDRLPWTSCQNAWNTGNCTNYFSEGNITWTLHSTSPAEEFYTRHVLQIH
RSKGLQDLGGISWQLALCIMLIFTVIYFSIWKGVKTSGKVVWVTATFPYIILFILLLRGA
TLPGAWRGVLFYLKPNWQKLLETGVWVDAAAQIFFSLGPGFGVLLAFASYNKFNNNCYQD
ALVTSAVNCVTSFISGFVIFTVLGYMAEMRNEDVSEVAKDAGPSLLFITYAEAIANMPAS
TFFAIIFFLMLITLGLDSTFAGLEGVITAVLDEFPHIWSKRREWFVLAVVITCFFGSLVT
LTFGGAYVVKLLEEYATGPAVLTVVLIEAIAVFWFYGLTQFCSDVKEMLGFSPGWFWRIC
WVAISPLFLLFIICSFLMSPPQLRLFQYNYPHWSIILGYCIGTSSFICIPTYIMYRLITT
PGTLKERIIKSITPETPTEIPCGDIRLNVV
NT seq
1893 nt
NT seq
+upstream
nt +downstream
nt
atggagactacgcccctaagttcccagaaggagccggcagtgggcacggatggagatgat
tgtcaggagaatggagtgctacagaagggtgtccctggccctggggacaaggcagagtcg
ggccaaatctccaacggttactcagcggttcccagcccgggtgcaggagacggtgttcag
cactctgccgccacggccaccactgccctagtggctgaggctccggctggcgagcgggag
acatggggcaagaaggtggatttcctcctctcggtcattggctatgctgtggacctgggc
aacgtctggcgctttccctacatctgttaccagaatggagggggtgccttcctcctccct
tacaccatcatggccatttttggaggaatccctctcttctacatggagcttgcgctgggc
cagtatcatcgaaacggctgcatttccgtgtggaagaaaatctgccccatcttcaaaggc
atcggctatgccatctgcatcatcgccttctacatcgcctcctactacaacaccatcatg
gcctgggcgctctactacctcatctcctccttcaccgaccggctgccctggaccagctgc
cagaatgcctggaacacgggcaactgcaccaactacttctcagagggcaacatcacctgg
acgctgcactccacatcccccgcggaagaattttacacgcgccacgtcctgcagatccat
cggtctaaggggctccaagacctggggggcatcagctggcagcttgccctctgcatcatg
ctgatcttcacggtgatctacttcagcatctggaaaggcgtcaaaacttctggcaaggtg
gtatgggtgacggccacctttccttacatcatcctctttatcctgctgctgaggggcgcc
accctccctggggcctggcggggcgtcctcttctacttgaaacccaactggcagaagctc
ctggagacaggggtgtgggtggacgcggctgctcagattttcttctctcttggtcctggc
ttcggggtcctcctggcttttgctagctacaacaaattcaacaacaactgctaccaagac
gcgttggtgaccagtgcagtgaactgcgtgacaagcttcatttccggatttgtcattttc
acggtgcttgggtacatggctgagatgaggaatgaagatgtatctgaagtggccaaagat
gcaggccccagcctcctcttcatcacctacgccgaggccatagccaacatgccagcatcc
accttcttcgccatcatcttcttcctaatgctgattacactgggtctggacagcacattt
gcaggcttggagggtgtcatcaccgctgtgctcgacgagttcccacacatctggtccaag
cgccgggagtggtttgtgcttgctgtggtcattacctgcttctttggatccctggtcacc
ctgacttttggtggcgcgtacgtggtgaagctgttggaggagtacgctacggggcccgcg
gtgctcaccgtcgtgctgatagaggccatcgctgtgttttggttctatggcctgactcag
ttctgcagtgatgtgaaggaaatgctgggcttcagccctggatggttctggaggatctgc
tgggttgccatcagccccctgtttctcctgttcatcatttgcagttttttgatgagccca
ccacagctacgacttttccagtataattaccctcactggagcatcattctcggctactgc
atagggacctcctctttcatctgcatccccacgtacataatgtaccggctaatcaccact
ccagggacactgaaggagcgtattattaaaagcatcactccagaaacaccaacagaaatt
ccctgtggggacatccgcctaaacgtcgtgtga
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