Sorex araneus (European shrew): 101547367
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Entry
101547367 CDS
T07854
Symbol
TARBP1
Name
(RefSeq) probable methyltransferase TARBP1
KO
K15333
tRNA guanosine-2'-O-methyltransferase [EC:
2.1.1.34
]
Organism
sara
Sorex araneus (European shrew)
Brite
KEGG Orthology (KO) [BR:
sara00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sara03016
]
101547367 (TARBP1)
03036 Chromosome and associated proteins [BR:
sara03036
]
101547367 (TARBP1)
Enzymes [BR:
sara01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.34 tRNA (guanosine18-2'-O)-methyltransferase
101547367 (TARBP1)
Transfer RNA biogenesis [BR:
sara03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
101547367 (TARBP1)
Chromosome and associated proteins [BR:
sara03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
101547367 (TARBP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SpoU_methylase
TARBP1
Motif
Other DBs
NCBI-GeneID:
101547367
NCBI-ProteinID:
XP_004620434
LinkDB
All DBs
Position
Unknown
AA seq
1360 aa
AA seq
DB search
MEGVLAETLLSQVPDPRVLVGALCRGEASAERVEALRFLLQRLEDGPTLFWWSEKKKDVL
LKFWENYILIMETLEGNQIHVIKPVLPKLNNLFECAVSEENGCWLFHPSWHMCIYKRMFE
SENKVLTKEGVTHFLELYETKLLPYSQEFSEFIIGPLMDALSESSLYSRFPGQPIGSGSP
LGLKLQKFLVTYVSLLSEEIKSSFLLKFIQKMTSRHWCAVPVLFISKALAGVPRCKALGL
EGLLALRDVLQCTMITHQILLRGAAQCYLLQTAMNLVDVEKVSLSDVSTFLMSLRQEESL
ARGTSLWTELCDWLRVNESSFRRSSSCSSIELHETSYLNAYVKNLVQEYIKSPAWETGEN
CFIPDWFEARLIAMMVLLAVDVDGMKTIQHSEKQRTQNVLRIFLDPLLDALVKFGTNAYM
PLLKTDRCLQLLLKLLHTCLLKGSRTQDDEVFTVLQNFVMSTSESVSQFILRRLTMNELT
SISDLDRCHLYLMVLTELINLHLKIGWKSDNPIWRVISPLRNVSIQHLQETDNGQEPTLG
RQIQKVVSMASLAVLCETIDEKPDVQLDPRDAGPTERFLSSLPFNQTLHKPHTEEQSRCV
RPSERSVYKSFFEESSPSQGWGKIVAQYIHDQWVCLSFLLKKYHTLIPTSEGEILEPILP
AVQVPVRTLQFALEALTVLPSDQVLPVFHCMKILVPKLLTSSESLCIESFDMAWKIISSL
SNTQLIFWSNLKAFVHFVFDAEVLTIAAKIKGQVYFKIKEIMSNIIEMSATKTGVFNVLI
SYCCQSWIISASDVSQVSLSSAKNYSELVLEACLFGTVFRRDQRLIQDIQTFIENLGHEC
AANIIIENTKREDHYVRICAVKFLCLLDDSNISHKLFIEDLAIKLLDKDELVSKSRTCYY
VNSQQHRVKNRIWQTLLILFPRFDQNFLNRIIDKIFEAGFVNNQASIKYLIEWIIILILH
KFPQFLPKFWDCFSYGEENLKTSICIFLSVLSHFDIITENIPEKKLVLKQALIIILKWCF
NHNFSVRLYALVALKKIWSMCKMLHIEEFDALTSVIESSLNQVENMHGAGNAKKNWQRIQ
EHFFFATFHPLKDYCLETIFYTLPRLSGLIEDEWITIGKFTKFTEIPLDAEFQWYLSSTQ
LCELKAGDWSQQDIGSNSGEADNQSDWTDVQKKIIPWKNYVPDLDLELVLQDRAARLGKL
INRLIVVASLIDKPTNLGGLCRTCEVFGASVLVVGSLHYIKDKQFQHLSVSAEHWLPLVE
VKPPQLLDYLQQKKAEGYTIIGVEQTARSLDLTQYCFPEKSLLLLGNEHEGIPANLIQQL
DVCVEIPQQGIIRSLNVHVSGALLIWEYTRQQLLKLADNV
NT seq
4083 nt
NT seq
+upstream
nt +downstream
nt
atggagggggtgctcgcggagaccctgctgtcgcaggtcccggaccctcgggtcctggtg
ggagcgctgtgccgcggggaggcttccgcggagcgcgtggaggcgctgcgctttcttctg
cagcggctggaggacggtcccactctgttttggtggtctgagaagaaaaaagatgtgctg
ctaaagttttgggaaaactatattttaatcatggaaaccttagaaggaaatcagatacat
gttataaagccggttttaccaaagctaaacaatctgtttgaatgtgcagtgtcagaggaa
aatggatgttggctcttccacccatcctggcacatgtgtatttataaaagaatgtttgaa
agtgaaaacaaagtcctgaccaaggaaggtgttacccactttttagagctgtatgaaaca
aagctgcttccatattcacaagaattttctgagtttattattggacccttaatggatgca
ctttctgaaagctcactatatagcaggtttccaggccaacccataggaagtggttctcca
ttgggattgaaattacagaagtttttagtcacttacgtttctcttctttcagaagaaata
aagagcagtttccttttaaagtttattcagaagatgacaagtagacattggtgtgctgtc
cctgttttgtttatatctaaggctttggcaggtgtcccaagatgtaaagccctgggtctc
gaagggcttcttgcgctcagggatgttcttcagtgtactatgatcacacatcagattctg
ctcagaggggcagctcagtgctatcttcttcagacagctatgaatttggttgatgtggag
aaagtgtcactctctgatgtctcaactttcctcatgtctctgagacaagaggagtcctta
gcacgaggaacatcattgtggacagagctctgtgattggttacgtgttaatgaaagcagt
tttaggaggtcttcatcttgtagctccattgaacttcatgagacatcctatttaaatgct
tatgtaaagaacctagttcaagaatatattaagtcacctgcttgggaaacaggagaaaac
tgctttatacctgattggtttgaagccaggctcattgctatgatggtcttattggcagtt
gatgtggatggaatgaaaacaattcagcatagtgaaaagcagcgaacacagaatgttttg
aggatattcttagatcctcttctggatgcccttgtgaagtttggtacaaatgcctacatg
cccttgctgaaaaccgacagatgcctccagttgctattgaagttattgcatacttgcttg
ttgaaaggttccagaactcaagatgatgaagtatttactgttcttcagaactttgtcatg
tctacttcagagagtgtttctcagtttatactcagaagacttactatgaatgaactaact
agtatttcagatctggatcgctgtcatttatacctgatggtattaactgagcttataaat
ctccatttgaagattgggtggaaaagtgataaccctatttggagagttatttctcccttg
agaaatgtatctattcaacatcttcaagagacagacaatggacaggaaccgacgcttggt
agacagattcagaaagtcgttagtatggcctccttggccgtgttgtgtgagaccattgac
gagaagcccgatgtgcagctggacccccgggacgcaggacccactgagaggttcctttct
tctcttcctttcaaccagactttgcacaagccccacacagaggagcaaagcaggtgtgtt
cgcccctcagagcgcagcgtatacaaaagtttttttgaagaatcttcaccttcccaagga
tgggggaaaatagttgcacagtatattcatgatcagtgggtctgcctctcttttctattg
aaaaaatatcacacccttattccaacatcagaaggtgaaattctggaacccattttacct
gctgttcaagtgccagtaaggactttacagtttgctctagaagccctcacagttcttcct
tctgatcaagttttacctgtgttccattgcatgaaaattctggttcccaagcttctgacc
tcctctgaatcactctgcatagagtcttttgacatggcttggaaaattatatcttcttta
agcaacactcagttgatattctggtctaatttaaaagcttttgttcattttgtttttgat
gcggaagtacttaccattgctgcaaaaatcaagggccaggtgtatttcaaaataaaagag
attatgtccaatataatcgaaatgtctgctacaaaaactggagtcttcaatgtactaata
agttattgctgccagtcttggataatttctgcttcagatgtgtcccaagtatcattatca
agtgctaaaaactatagtgaacttgtccttgaggcttgtttatttggaactgtatttaga
cgtgatcaaagacttattcaggatatacaaaccttcatagaaaatcttgggcatgaatgt
gcagctaacattattattgaaaatactaaaagagaagaccattatgtgagaatttgtgct
gtcaaattcctctgtttactggatgactcaaatatatctcataaattgtttatagaagac
cttgccatcaagctcttagacaaagatgaattggtatctaagtctagaacatgttactat
gtaaattctcaacaacatcgagtgaaaaatcgaatatggcagactctgctcatccttttc
ccaagatttgatcagaatttcttgaatagaattattgacaagatttttgaggctggtttt
gtcaataatcaagcatccataaaatatcttatagaatggattattatattgattcttcat
aaatttcctcagtttcttccaaagttctgggattgcttttcatatggtgaagaaaacctt
aaaacaagcatttgcatatttttatcagttttgtcacattttgacatcattactgaaaat
attccagaaaagaaactagttctgaagcaagcccttattatcatactgaagtggtgcttc
aaccacaattttagtgtacgtttgtatgcattggttgctcttaagaaaatctggagtatg
tgtaaaatgttacatattgaagaattcgatgctttgacttctgttattgaatcgagcctt
aaccaggtggagaatatgcatggagcagggaatgccaagaagaattggcagcgcattcaa
gaacatttcttttttgcaacatttcacccacttaaggattattgtctggagactatattt
tacacccttccacgcctctcaggccttattgaagacgaatggatcaccattggtaaattt
accaaattcactgaaattcctttagacgccgaatttcagtggtacctttcttcaactcaa
ctttgtgaattaaaagcaggcgactggtctcagcaggacataggttctaactcaggagaa
gcagataaccaatcagactggactgatgttcagaagaagattatcccatggaaaaattat
gttccagatttagatctggagttagttcttcaggatcgtgctgccagacttggaaagttg
attaacagactgattgttgtagcctcactcattgataagccaaccaatttaggaggactg
tgccggacctgtgaggtttttggggcctcggtgctcgttgttggtagtctgcactatatc
aaggacaaacagtttcagcacctcagcgtttcagcagaacactggcttcctttagtggag
gtaaagccacctcaattgcttgattatctgcagcagaaaaaagcagaaggttatactatc
attggtgtggaacaaactgccagaagtttagatctgactcagtattgctttcctgagaaa
tctctacttttgttgggaaatgaacatgaaggaattccagcaaatctgatccaacaattg
gatgtctgtgtggaaattccccaacagggaattattcgctcacttaatgtccatgtgagt
ggagctctgctgatttgggagtataccagacaacagctgcttaagcttgcagacaatgta
tga
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integrated database retrieval system
