Sorex araneus (European shrew): 101547635
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Entry
101547635 CDS
T07854
Symbol
CIC
Name
(RefSeq) protein capicua homolog isoform X2
KO
K20225
capicua transcriptional repressor
Organism
sara
Sorex araneus (European shrew)
Pathway
sara05017
Spinocerebellar ataxia
Brite
KEGG Orthology (KO) [BR:
sara00001
]
09160 Human Diseases
09164 Neurodegenerative disease
05017 Spinocerebellar ataxia
101547635 (CIC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sara03000
]
101547635 (CIC)
Transcription factors [BR:
sara03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
101547635 (CIC)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
Motif
Other DBs
NCBI-GeneID:
101547635
NCBI-ProteinID:
XP_004620753
LinkDB
All DBs
Position
Unknown
AA seq
1598 aa
AA seq
DB search
MYSAHRPLVPASGAASRGLGMFVWTNVEPRSVAVFPWHSLVPFLAPSQPDPSVQPSEAQQ
PASHPVASNQSKEPAESAAVAHEQPPGGPGNADPGRPPGATCPESPGPPHTLGGVDPGKG
PPPTTEEETPGPPGESRLDSETESDHDDAFLSIMSPEIQLPLPPGKRRTQSLSALPKERD
SSSEKDGRSPNKREKDHIRRPMNAFMIFSKRHRALVHQRHPNQDNRTVSKILGEWWYALG
PKEKQKYHDLAFQVKEAHFKAHPDWKWCNKDRKKSSSEAKPPSLGLAGGHKEARERSMSE
TGTAAAPGMSSELLSVAAQTLLSSDTKTPGSGSCGTDRLHAVGGPGSARPRAFSHSGVHS
LDGGEVDSQALQELTQMVSGPASYSGPKPSAQYGASGPFAAPGEGGALAATGRPPLLPTR
ASRSQRAASEDMTSDEERMVICEEEGDDDVIADDGFSATDIDLKCKERVTDSESGDSSGE
DPEGNKGFGRKVFSPVIRSFTHCRPPMDPEPPGPPDPPAFGKGYCSAPSSSSPAAASASA
ASSFPLGSGSFKTQESGQGSTGGPLRPPPAGPGGPPAPSKATRFLPADTAPFRRKRPESV
GALEPPGPSVIAAPPGGGGSILQSLVLPPSKEERDSSSARMPSAPAPSLAYGAPAVPLSR
PAATMVTNVVRPVSSTPVPIASKPFPPSGRAEAAPSDSAGARTETGGARAPGGSPLGVSL
VYSDKKSAAATSPAPHLVAGPLLGTVGKAPAAVTNLLVGTPGYGAPAPPAVQFIAQGAPG
SGASTGSGAVAGSGPNGPVPLGILQPGALGKAGGITQVQYILPTLPQQLQVAPTPAPAPG
TKAAASGGPAPTTSIRFTLPPGTSTNGKVLAATAPTPGIPILQSVPSAPPPKAQSPGGSA
QLLPGKVLVPLATPSVSVRGSGAGQPLPLVSPPFSVPVQNGAQPPSKIIQLTPVPVSTPS
GLVPPLSPATLPGPTSQPQKVLLPSSTRITYVQSAGGHTLPLGTSPASSQPGTVTSYGPT
SSVALGFTSLGPSGPAFVQPLLSGQAPLLAPGQVGVSPVPNPQLPPTCTASGGPVITAFY
PGSPAPTSSAPLAQPSQAAPGLVYTVATSTTPPAAAILPKGPPAPATATPAPTSPFPSAT
AGSMTYSLVAPKAQRPVPKAPQKVKAAIASIPVGSFEAGAPGRPGPAARQALDPGPARDT
PVPETELEGQPTTPGPPHPPEAWPPATRSSPPPPPAAEERGGAKGTESMASKFPSSSADW
RVPGLGLETRGEPPTPPSPAPAPALAAGSSSSGSGNSEGSSGRATGDTPERKEATGPGKK
VKVRPPPLKKTFDSVDNRVLSEVDFEERFAELPEFRPEEVLPSPTLQSLATSPRAILGSY
RKKRKNSTDLDSAPEDPTSPKRKIRRRSSCSSEPNTPKSAKCEGDIFTFDRTGTEAEDVL
GELEYEKVPYSSLRRTLDQRRALVMQLFQDHGFFPSAQATAAFQARYADIFPSKVCLQLK
IREVRQKIMQAATPTEQPPGAEASLPGPPPAGATAAPGPTPSPAGGPDPTSPGSDSGTAP
AAPPLPPPPEPGPGQPGWEGPSQASPPPPGSSTAATGR
NT seq
4797 nt
NT seq
+upstream
nt +downstream
nt
atgtactcagcccacaggcccctggttcccgcgtccggcgcggcctcccgtggcctcggc
atgttcgtgtggacgaacgtggagcctcgctctgtggccgtgttcccctggcactccctt
gtccccttcctggcccccagccagcccgacccctccgtgcagcccagtgaggcccagcaa
cctgccagccacccagtggcctccaaccagagcaaagaacctgctgagtctgcggccgtt
gctcacgagcagcccccaggtgggcccggcaatgctgaccccgggcggcctcccggagcc
acttgccctgagagcccagggcccccgcacactttgggaggggtggaccctggaaagggc
cctcctcctaccacagaggaagagacccctgggcccccgggagagtcgaggctggacagt
gagacggagagtgaccatgacgatgcattcctctccatcatgtctccggagatccagctg
cctctgcctccagggaagcggcggacgcagtccctcagtgccctgcccaaggagagggac
tcctcctctgaaaaggatggacgcagccccaacaagcgcgagaaggatcacatccggagg
cccatgaacgccttcatgatctttagcaagcggcaccgggccctggtgcaccagcgtcac
cccaaccaggacaaccggactgtcagcaagatcctgggcgagtggtggtacgccctgggg
cccaaggagaagcagaagtaccatgatctggcctttcaggtcaaggaggcccactttaag
gcccacccagactggaagtggtgcaacaaggatcggaagaagtccagctcggaggccaag
cccccgagcctggggctggcaggagggcacaaggaggcgagagagcggagcatgtcggag
acgggcactgctgctgcccctggaatgtcctctgagctcctgtccgttgccgcccagacg
ctcttgagctcagacaccaagaccccagggagcggctcctgcgggactgaccgtctgcac
gcagttggggggcccggctcagcccggcctcgggccttctcccacagtggggtgcacagc
ctggacggtggggaagtagacagccaagcactccaggagctgactcagatggtgtctggc
cctgcgtcctactctggcccaaagccttctgcccaatatggggcatcaggccccttcgct
gctcctggtgaggggggggccctggccgccactgggcgacccccactgctgcccacccga
gcttctcgttcgcagcgtgcggccagtgaagatatgaccagtgatgaggaacggatggtc
atctgtgaggaggaaggggatgatgatgttattgctgacgatggcttcagtgccaccgac
attgacctcaagtgcaaggagcgggtgactgacagcgagagtggagacagctctggggag
gacccagagggcaacaagggctttggccggaaggtgttctcacccgtgatccgctccttt
acccactgccgtcctccaatggaccctgagcccccaggacccccagaccctccagccttt
ggcaaaggctactgctccgccccatcgtcctcctcgcctgccgctgcctccgcctcggct
gcctcttccttccctctgggctcaggatccttcaagacccaggagtccgggcagggcagc
actggtggccctctccggccaccacccgccgggcctggaggcccacccgcaccttccaag
gccacccgcttcctcccagctgataccgcccctttccggcgcaagagacctgagagcgtg
ggggccttggaaccaccaggcccctcagtcattgcggcgcctcccggcgggggtggcagc
atcctgcagagcctggtcctgcccccgagcaaggaggagcgggacagcagtagtgcccgc
atgccctcagccccagccccatcgctggcctatggggctcccgcagtccccctgtcccgc
ccggctgccaccatggtcaccaatgtggtgcggcccgtcagcagcactcctgtacccatc
gcctccaagccctttcccccctccggccgggcagaggcagctccaagtgactcggcaggt
gctaggactgagactggtggggccagggctcccggaggctccccactgggcgtcagctta
gtgtactcagacaagaagtcagcggctgccacctcaccagcccctcatttggtggctgga
cccctgctgggcactgtggggaaggcacctgccgctgtcaccaacttactggtgggcacc
ccaggctatggggccccagcgccccctgctgtccagttcattgcccagggagctcctggc
agtggggccagtactggctcaggagcagttgctgggagtggccccaatgggccagtgcct
ttgggcattctgcagccaggtgctctgggcaaagctgggggcatcacccaggtgcagtac
atcctgcccacactgccccagcagttgcaggtggcgcccacccctgcaccagcccctggg
accaaggcagcagcttctggtggccccgcgcccaccaccagcatccgtttcaccctccca
ccgggtacctccaccaacggcaaagtcctggccgccactgcacccacgcctggcatcccc
atcctacagtctgtcccttctgctccaccccccaaagcccagtcccccggtggttctgcc
cagttgctgcctgggaaggtcttggtgcccctggccacccccagcgtgtcagtgcggggc
agcggggctggccaacccctgcccctggtgagcccacccttctcggttcctgtgcagaat
ggcgcgcagccccccagcaagatcatccaactgactccagtgcccgtgagcacccccagc
ggcctggtgccgcccctcagcccagccacgctccctggacccacctcacagccccagaaa
gtcctgctgccctcctccaccaggatcacctatgtgcagtcggcgggagggcacacgctg
cccctgggcaccagccccgcatccagccagcctggcaccgtcacctcgtacgggcccacg
agctccgttgccctcggtttcacctctctggggcccagcggccctgccttcgtgcagccc
ctgctttcaggtcaagccccgctgctggctcctggccaggtgggcgtgtcacctgtgccc
aacccccagctgcctcccacttgcacggcctccgggggtcctgtcatcacagcgttttac
cctggcagtcctgcacccacctcctcagcacccctggcccagccgtcccaggctgcccct
ggtctagtctacactgtggccaccagcaccaccccacctgccgctgccatcctgcccaag
ggccctccggcccctgccactgccaccccagcccccaccagccctttcccaagtgccaca
gcaggctccatgacgtacagcttagtggcccccaaagcccagcgacctgtgcccaaggct
ccccagaaagtgaaggcggccatcgccagcattcccgtaggctccttcgaggcaggtgcc
cccgggcggcctggcccagcagcccggcaagccctggatcccggccctgcccgtgacacc
ccggtcccagagactgagctggaggggcagccgacaaccccaggcccaccacaccctcca
gaggcctggccacctgcgactcggagcagtcccccgcctcccccagctgccgaagagcgg
ggcggcgccaagggcactgagagcatggccagcaaattccccagctcctctgccgactgg
cgcgtccctgggctgggcctcgagacccgtggggagccccccacccctcccagtcccgcc
ccggctccggccctggccgcaggaagcagcagcagcggcagcggcaacagtgagggcagc
agcgggagggcaactggggacacccccgagcgcaaggaggcaacgggtcccggcaagaag
gtgaaggtgcggcccccgcccctgaagaagacctttgactctgtggacaacagggtcctg
tccgaggtggactttgaagagcgcttcgccgagctgcccgagtttcggcctgaggaggtg
cttccctcgcccaccctccagtctctggccacctccccgcgtgccatcctgggctcctac
cgcaagaagaggaagaactccactgacctggactcagcccccgaggaccccacctcaccc
aaacgcaagatcaggagacgctccagctgcagctcagagcccaacacccccaagagcgcc
aagtgcgaaggggacatcttcacctttgaccgcacaggaacagaagccgaggacgtcctg
ggggagctggagtacgagaaggtgccctactcctccctgcggcgcaccctggaccagcgc
cgcgccctggtcatgcagctcttccaggaccacggcttcttcccctctgcccaggccacg
gccgccttccaggcccgctacgcggacatcttcccctccaaggtgtgtctgcagctgaag
atccgggaggtgcgccagaagatcatgcaggctgccacgcccacggagcagcctcccggg
gctgaggcctccctgcctggaccaccccccgcgggcgccactgctgcccctggccccact
cccagccccgcggggggccctgatcccacctcgcctggctcggactctggcacagcccca
gctgccccgccgctgcctcccccccctgagccaggacctgggcagcccggctgggagggc
ccctcccaggcatccccgccaccgcctggctcctctacagccgccacaggcaggtga
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