Sorex araneus (European shrew): 101547772
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Entry
101547772 CDS
T07854
Symbol
RFC1
Name
(RefSeq) replication factor C subunit 1
KO
K10754
replication factor C subunit 1
Organism
sara
Sorex araneus (European shrew)
Pathway
sara03030
DNA replication
sara03410
Base excision repair
sara03420
Nucleotide excision repair
sara03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
sara00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
101547772 (RFC1)
03410 Base excision repair
101547772 (RFC1)
03420 Nucleotide excision repair
101547772 (RFC1)
03430 Mismatch repair
101547772 (RFC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sara03032
]
101547772 (RFC1)
03400 DNA repair and recombination proteins [BR:
sara03400
]
101547772 (RFC1)
DNA replication proteins [BR:
sara03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
101547772 (RFC1)
DNA repair and recombination proteins [BR:
sara03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
101547772 (RFC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RFC1
BRCT
AAA
PTCB-BRCT
BRCT_2
RuvB_N
Rad17
AAA_22
AAA_14
AAA_33
AAA_17
AAA_5
AAA_16
AAA_7
nSTAND3
Zeta_toxin
AAA_18
RNA_helicase
TIP49
NTPase_1
AAA_19
AAA_30
Motif
Other DBs
NCBI-GeneID:
101547772
NCBI-ProteinID:
XP_012788053
LinkDB
All DBs
Position
Unknown
AA seq
1152 aa
AA seq
DB search
MALELDIRKFFGVIPSGKKLVSEAVKKNEKTKGTEDTPKAKRGKKEGKVNACKEDDAKQK
QPNKKKRIIYDSDSDSEETVQGKNAKKQAEKLPLSTKPGKILRRDPVTYISETDEEDDFI
CKKAASKAKENGGSVVSYLGVANMKKGEENTKIKNKPLSPIKLTPTSVLDYFGTGSIQRS
DKKMVASKRKEPSHSVDDARLSDEALAEQLQLEEDAELERQLHEDEEFARTLAMLDEEPK
NRKARKDPEERETLLSFQANLSKAEKHKYPHKVKAEKFSDEMFYSPEKQIKCESPKKPQQ
HSKSLAHKIGEPSSPNISSKLTLLKKKEEHVYKGTAPLASKRKENANELEGETKTPKKTK
VSPAKKESVSPEDSEKRRTNYQAYRSYLNREGPKALGSKEIPTGAENCLEGLTFVITGVL
ESIERDEAKSLIERYGGKVTGNVSKKTSYLVMGRDSGQSKSDKAAALGTKIIDEDGLLNL
IRTMPGKKSKYEIAVEAEMKKEKSKLERTPQKSSPGKRKMSLTPKKESESKRTRLTPRKG
GSLTPKRQAPSPSQRGPQGTEPLAEELRGGRRPGREAEGSGETGAESLLWVDKYKPTSLR
TVIGQQGEQSCANKLLRWLQGWHRAPSEEKKHATKFGKFAGKDDGSSFKAALLSGPPGVG
KTTTATLVCQELGYSYVELNASDTRSRSSLKEIVAESLNNTSIKGFYSSGGSPGSLKHAL
IMDEVDGMAGNEDRGGIQELIGLIKHTKIPIICMCNDRNHPKIRSLVHYCFDLRFQRPRV
EQIKGAMLSIAFKEGLKIPPPAMNEIILGANQDIRQVLHNLSMWCAETKALTYDQAKADS
HRAKKDIKLGPFDVARKVFAAGEETAHMSLVDKSDLFFHDYSIAPLFVQENYVHVKPVAA
GGDMKKHLMLLSRAADSICDGDLVDRQIRSMQNWNLLPTQAIYASVLPGELMRGFMTQFP
TFPSWLGKHSSTGRHDRIVQDLALHMSLRTYSSKRTVNLDYLSHIRDALVQPLISQGVEG
AQDVVTLMDTYHLMKEDFENIMELSSWGGKPSPFSRLDPKVKAAFTRAYNREAHLTPYSL
QALKPRRHSSVGLAQDSEYSEELNDEDSLADDKDPNAVESDAMIKKKTKAPKPSKSEKDK
EPRKGKGKSSKK
NT seq
3459 nt
NT seq
+upstream
nt +downstream
nt
atggcgctggagttggatattcggaaattctttggggttataccaagtggaaagaagctt
gtgagtgaagcagtgaagaagaatgagaaaacaaagggtacggaagacaccccgaaagcc
aagagaggcaaaaaggaaggcaaggtaaatgcttgtaaagaagatgatgctaagcagaag
cagccaaataagaaaaagaggatcatctacgattcagattcagattcagaggagacagtg
cagggtaaaaatgccaaaaagcaagcagaaaagttgccattgtctactaagcctggtaaa
attctccggcgggatcctgttacatacatttcagaaacagatgaagaagatgactttata
tgtaagaaagcagcctcgaaagcaaaggagaacggaggatccgtggttagttatcttgga
gtagccaatatgaaaaagggtgaagaaaacactaagatcaagaataaacctttgtcacca
ataaaacttacccccacgtcagtgctggactattttggaactggaagtatacagcgatca
gacaagaagatggtggcaagcaaaagaaaagagccttcacacagtgtggacgatgccagg
ctcagcgatgaggctctcgccgagcagctccagctggaggaggatgcagagctggagcgg
cagctgcacgaggatgaagagtttgcccggactttagccatgttggacgaagagcccaag
aacaggaaggctcgaaaggacccagaagagagagagacattattatctttccaagccaat
ttaagtaaagcagaaaaacataaatatcctcacaaagtaaaagcagaaaaattttcagat
gaaatgttctatagtcctgagaaacaaattaaatgtgaaagtccaaaaaaacctcaacaa
cattccaagtcattagctcacaaaataggagagccatcttctccaaatatcagttccaag
ttgacccttttgaaaaaaaaagaagagcatgtttataaaggaacagcacctttggcctca
aaaagaaaagaaaatgctaatgaattggaaggagagacaaaaactcctaagaaaaccaaa
gtttctccagctaaaaaagagtctgtaagtcctgaggattctgagaagagacgcaccaat
tatcaggcttaccggagctacttgaatcgagagggccccaaagctcttggatccaaggaa
attccaacgggagctgagaattgcttggaagggctcacgtttgtgatcaccggcgtgctg
gagtccatcgagcgggacgaggccaagtctctgattgagcggtacggcggcaaggtgaca
ggcaacgtcagcaagaaaaccagctacctggtcatgggccgtgacagtggccagtccaag
agcgacaaggcagcggccttggggaccaaaattattgatgaggatggcctactgaatctg
attcgaaccatgccaggcaagaagtccaagtacgaaatagcagttgaagctgagatgaag
aaagaaaagtctaaattggagcggacaccccagaaaagcagcccaggaaaaaggaaaatg
agcctgacccctaagaaggagtcggaatctaaaaggaccagactgactccccgaaagggc
ggctccctcacgccaaagagacaggccccgagcccgtcccagcggggcccgcagggcacg
gagccactggccgaggagctgcggggcggccgcaggccggggcgcgaggctgagggcagc
ggcgagaccggggcggagtctctgctctgggtggataagtacaagccgacctccctccgg
accgtcatcggacagcagggcgagcagagctgcgccaacaagctcctgcgctggctgcag
ggctggcaccgggcgccctcggaggagaagaaacacgcgacgaagtttggcaaatttgcc
ggcaaagacgacggctccagctttaaggctgcattgctctcgggccctccgggtgtcggc
aaaaccaccacagccactctggtttgtcaggaattgggatatagctacgtggaactgaat
gcaagtgacactcggagtaggagcagtttgaaggagattgtggccgagtcactgaataac
accagcatcaaaggcttttattcaagtggcggttctcctgggagcctaaaacacgcactc
atcatggacgaagtggacggcatggcggggaacgaggacaggggcggaatccaggaatta
attggcctgataaaacacacaaaaattcccattatttgtatgtgcaatgatagaaatcat
cccaagattcgctctttggttcattattgttttgatcttcgttttcaaagacctcgggtt
gaacagattaagggcgctatgctatctattgcatttaaagaagggttaaagattcctcct
ccagctatgaatgaaataattttaggggccaatcaagatatcagacaggttttacacaat
ctgagtatgtggtgtgcagaaactaaggcactaacctatgaccaggccaaggctgactct
cacagagccaaaaaggacatcaaactgggcccgtttgatgttgctcggaaggtgtttgca
gccggcgaggagacagctcacatgtcgttggtagacaagtcggatctcttcttccacgat
tactccatagcacccctgtttgtgcaggagaactacgtccatgtgaagcccgttgctgcg
gggggcgacatgaagaagcacttgatgctactgagcagggctgctgacagcatctgtgac
ggggacctcgtggaccgtcagatccggagcatgcagaactggaacctactgcccacacag
gccatttacgccagtgttcttcctggagagctcatgaggggcttcatgactcagtttccc
accttccccagctggctgggcaagcactcgtccacgggcaggcacgaccgcattgttcag
gacctggctttgcacatgagcctcagaacttactccagcaagaggaccgtgaatctggac
tatctgtcccacatacgggatgcgcttgtgcagcccttgatttcacaaggggttgaagga
gcccaggatgtcgtcactctcatggacacgtatcatctgatgaaggaggactttgagaat
ataatggaattgagcagctggggaggcaaacccagcccattctccaggctggaccccaag
gtgaaagcggccttcactagggcgtacaacagagaagcgcacctcaccccgtactcgctg
caggccctgaagccccgccggcacagcagcgtggggctggcgcaggactcagagtacagc
gaggagctgaatgacgaggactctctggccgacgacaaggaccccaacgccgtggagagt
gacgccatgatcaagaaaaagacaaaagctccaaagccttcaaaatcagaaaaagataaa
gagcccagaaaaggaaaaggaaaaagttccaagaaatga
DBGET
integrated database retrieval system
