Sorex araneus (European shrew): 101548202
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Entry
101548202 CDS
T07854
Symbol
RBBP6
Name
(RefSeq) E3 ubiquitin-protein ligase RBBP6 isoform X1
KO
K10624
E3 ubiquitin-protein ligase RBBP6 [EC:
2.3.2.27
]
Organism
sara
Sorex araneus (European shrew)
Brite
KEGG Orthology (KO) [BR:
sara00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sara04121
]
101548202 (RBBP6)
Enzymes [BR:
sara01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
101548202 (RBBP6)
Ubiquitin system [BR:
sara04121
]
Ubiquitin ligases (E3)
U-box type E3
101548202 (RBBP6)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-CCHC_2
U-box
zf-C3HC4_2
zf-C3HC4_3
zf-CCHC
zf-RING_UBOX
zf-RING_2
zf-C3HC4
zf-RING_5
zf-C3HC4_4
Motif
Other DBs
NCBI-GeneID:
101548202
NCBI-ProteinID:
XP_004604173
LinkDB
All DBs
Position
Unknown
AA seq
1701 aa
AA seq
DB search
MGTSKAIDDSSASISLAQLTKTANLAEANASEEDKIKAMMSQSGHEYDPINYMKKSLGPP
PPSYTCFRCGKPGHYIKNCPTNGDKNFESGPRIKKSTGIPRSFMMEVKDPNMKGAMLTNT
GKYAIPTIDAEAYAIGKKEKPPFLPEEPSSSSSEDDPIPDELLCLICKDIMTDAVVIPCC
GNSYCDECIRTALLESDEHTCPTCHQNDVSPDALIANKFLRQAVNNFKNETGYTKRLRKQ
LPPPPPPIPPPRLIQRNLQPLMRSPISRQQDPLMIPVTSSSTHPAASMSSLTSNQSSLAP
PVPGNPSSAPAPVPDITATVSISVHSEKSDGPFRDSDSKLLPAAALASEHSKGASSIAIT
ALMEEKGYQVPVLGAPSLLGQSLLHGQLIPTTGPVRINTARPGGGRPGWEHSNKLGYLVS
PPQQIRRGERSCYRSINRGRHHSERSQRTQGPSLPATPVFVPVPPPPLYPPPPHTLPLPP
GVPPPQFSPQFPPGQPPPAGYSVPPPGFPPAPANLSTPWVSSGVQTAHSNTIPTTQAPPL
SREEFYREQRRLKEEEKKKSKLDEFTNDFAKELMEYKKIQKERRRSFSRSKSPYSGSSYS
RSSYTYSKSRSGSTRSRSYSRSFSRSHSRSYSRSPPYPRRGRGKSRNYRSRSRSHGYHRS
RSRSPPYRRYHSRSRSPQAFRAQSPSKRNVPQGETEREYFNRYREVPPPYDMKAYYGRSV
DMRDPFEKERYREWERKYREWYEKYYKGYAAGAQPRPSANRENFSPERFLPLSIRNSPFT
RGRREDYSGGQSHRSRNIGGSYPEKLSARDSHNQKDNTKSKEKESESAAGDGKGNKHKKH
RKRRKGEESESFLNPELLETSRKSREPTSGEENKTDSLFVPPSRDDATPVRDEPMDAESV
TFKSVSEKDKREKDRPKAKGDKTKRKTDASTVSKKENVVKPAKGPQEKLDGEREKSPRSE
PPLKKAKEETPKTDSTKSSSSSQKDEKMLGTPRKAHSKSTKEHQETKPVKEEKVKKDYSK
DVKSEKLTSSKEEKTKKPSEKSKSLDSKGEKRKRKTEEKSVDKDFESSSSMKISKLEATE
IAKPSPKRKMEPDVEKMDRTPEKDKMSSTAPAKKIKLNRETGKKIGSTENIPNTKEPSEK
LESTSSKVKQEKVKGKVRRKVTGSEGSSSTLVDYTSTSSTGGSPVRKSEEKTDTKRTVIK
TMEEYNNDNTAPAEDVIIMIQVPQSKWDKDDFESEEEDVKSTQPVSNVGKPTSVIKNVST
KASNVVKYPEKESESLEKIQKLTKETSHEVTPHEVKSSKSLASSDKGKTKDRDHSVLEKE
NPEKRKNNAQPEKDNNMDHVNEQGNFKNLSQSSKETRTSDKHESLRGSSNKDFTPSRDKK
PDYDNRDYSSSSKRRDERNELTRRKDSPSRSKDSLSGQKTKPREERDLPKKGTGDSKKSA
SPSKDKKPHDHNKATYDTKHTSEETKSVDKNLMKDREKHALEARNNKEASGNKLLYILNP
PDPQIEKAEQVPTVSADKNAIKPKPQLSHSSRLSSDLTRETDEAAFEPDYNESDSESNVS
IKEEETPGKNPKEQKEKVVEKAKEIVDPAAVSQTGVPRSQSQSSPSVSPSRSHSPSGSQT
RSHSSSASSAESQDSKKKKKKKEKKKHKKHKKHKKHKKHAGTEVELEKGQKHKHKKKKSK
KNKDKEKEKEKDDQKVKSVTV
NT seq
5106 nt
NT seq
+upstream
nt +downstream
nt
atgggaacttcaaaagcaattgatgactcttctgcgtctatttctctggcccagcttact
aagactgccaatctggctgaagccaatgcttctgaagaagataaaattaaagcaatgatg
tctcaatctggccatgaatacgaccctatcaattatatgaagaagtctctcggtccccca
cctccgtcttatacctgtttccgttgtggtaaacctggccattatattaagaattgccca
acgaatggggataagaactttgaatcaggccctaggattaaaaagagcactggaataccc
agaagttttatgatggaagtgaaagaccctaacatgaaaggtgcaatgcttaccaacact
ggaaaatatgcaataccaactatagatgcagaagcatatgcaatagggaagaaagaaaag
ccacctttcttaccagaagaaccttcttcttcttcttctgaagatgatcctatcccagat
gaattactgtgtctcatctgcaaagatattatgactgatgccgttgtcattccctgctgt
ggaaacagttattgtgatgaatgtataagaacagctctcctggaatcagatgaacataca
tgtccaacctgtcatcagaatgatgtctctcctgatgctttgattgccaataaattctta
agacaggctgttaataacttcaaaaatgaaactggatatacaaaaaggctacgaaaacag
ttaccaccacccccacctccaatcccacctccaagactcattcagcggaacctccaacct
ctgatgaggtctccaatatcaagacagcaggatcctctgatgattccagtcacatcatca
tcgactcaccctgctgcctctatgtcttcattgacatctaatcaatcttccttggcccct
cctgtgcctggaaatccgtcttctgccccagctcctgtgcctgatataactgcaacagtc
tccatatcagtccactctgaaaaatcagatggacctttccgggattctgatagtaaatta
ctgccggcggcagcccttgcatcagagcactcaaaaggagcgtcttcaattgcaattact
gctctcatggaagagaagggttaccaggtgcctgtacttggagccccatctttattggga
cagtcattactacatggacagttgatccccacaactggtccagtaagaataaatactgct
cgtccgggtggtggccggccaggctgggaacattccaacaagcttggctatctggtttct
ccgccacagcaaatcagaagaggagagaggagctgctacagaagcataaatcgtggacga
catcacagcgaaagatcacagagaactcaaggtccatcactgccagcaactccagttttt
gtacctgtcccaccacctcctttgtatccacctcctccccatacacttcctctccctcca
ggtgttcctccaccacagttttctcctcagtttcctcctggccagcctccgcctgctggg
tatagtgtccctcctccagggtttcctccagctcctgccaacttatcaacaccttgggtg
tcatcaggagtgcagacagctcattcaaacaccatcccaacaacacaagcaccaccgttg
tccagggaagagttctatagagagcaacggagactcaaagaagaggaaaagaaaaagtcc
aagctagatgagtttacaaatgattttgctaaggaattgatggaatacaaaaagattcaa
aaggagcgtaggcgctcattttccaggtctaaaagtccctatagtggttcatcatattca
agaagttcatatacttactcaaaatcaagatctggctcaactcgttcacgctcctattct
cgatcatttagccgctcacactctcgttcctattcacgatcgccaccataccccagaaga
ggccgaggcaaaagtcggaattaccgttcacgctctagatctcatggataccatcggtct
aggtcaaggtcacccccctatagacggtaccattcacgatcaagatctcctcaagctttt
agggcacagtctcccagtaagcgtaatgtgcctcagggtgaaacagaacgtgaatatttt
aatagatacagagaagtcccaccaccttatgacatgaaagcttattatgggaggagtgtt
gacatgagagacccatttgaaaaagagcgttaccgagaatgggaaagaaaatacagagaa
tggtatgaaaaatattacaaaggttatgctgcaggagcacagcctagaccatccgcaaat
agagagaacttttctccggaaagatttttaccactaagtataaggaattctccctttaca
agaggtcgtcgagaagattattcaggtgggcagagtcatagaagtcgaaacattggtggc
agctacccagaaaaactttcagcaagagacagtcataatcagaaggataatacaaagtca
aaagagaaggaaagtgaaagcgctgcgggagatggtaaaggaaataaacataagaaacac
agaaaaagaagaaagggtgaagaaagtgaaagctttctaaatccagagttactagaaacc
tctaggaagtcaagagaacctacaagtggtgaggagaataaaacagactcactgtttgtg
ccccccagtagagatgatgccactcctgttagagatgaaccaatggatgcagagtctgtc
acttttaaatcagtttctgaaaaagacaagagagagaaggataggccgaaagcaaaaggt
gacaagaccaaacgcaaaacagatgcatctactgtatccaaaaaagaaaatgttgtaaaa
cctgcaaaaggacctcaagaaaaactagatggtgagcgtgaaaaatctcctcggtctgaa
cctccattaaaaaaagcaaaagaagagactccaaagactgatagtactaagtcatcctcc
tcatctcagaaagatgaaaagatgcttggtacccccagaaaagctcactctaagtcaaca
aaagaacatcaagagacaaaaccagtgaaagaggaaaaagtgaagaaggattactccaaa
gatgttaaatcagaaaagttaactagtagtaaagaagaaaagaccaagaagcccagtgag
aaaagtaaatcactggatagcaaaggagaaaagagaaaaagaaaaactgaagaaaagagt
gtagataaagattttgagtcatcatcatcaatgaaaatctctaaacttgaagcaactgaa
atagctaagccatcccccaagcgcaaaatggaacctgatgttgaaaagatggataggact
cctgaaaaagacaaaatgtcatcaactgccccggccaaaaaaatcaaacttaacagagaa
actggtaaaaaaattggaagtactgaaaatatacctaatacgaaagaaccctctgaaaaa
ttggaatcaacatctagcaaagttaaacaagaaaaagtcaaagggaaggtcagacgaaaa
gtaactggaagtgaaggatccagctctactctcgtggattataccagtacgagctcaact
ggaggcagtcctgtacggaagtctgaagaaaaaacagatacaaaacgaactgtcattaaa
actatggaggaatataataatgacaatacagctcctgctgaagatgttattattatgatt
caggttcctcaatccaaatgggataaagatgattttgaatctgaagaagaagatgttaaa
tccacacagcctgtctcaaatgtagggaagcccaccagtgttataaaaaatgtcagcact
aaagcatccaatgtagtcaagtatcctgaaaaggaaagtgagtcattggagaaaattcag
aaactcaccaaggaaaccagccatgaggtcacaccacatgaggtcaaaagttccaaaagt
ctcgcatctagtgataaaggaaaaaccaaagatcgagatcattcagtgttggaaaaggaa
aaccctgaaaagaggaagaacaatgctcagccagagaaagataataatatggaccatgtg
aatgaacagggaaattttaaaaacctgtctcagtcatccaaagagactagaacttcagat
aaacatgaatcccttcgagggtcctcaaataaagacttcactcccagtagagacaaaaaa
ccagactatgacaacagggattattcaagtagttccaaacgtagagatgaaaggaatgaa
ttaaccagaagaaaagactccccttcccggagcaaagattctttatctggacagaaaact
aagccaagggaggagagagacttgcctaaaaaaggaaccggggattctaaaaaaagtgct
agtccctcgaaagacaaaaaacctcacgatcacaacaaagccacttacgatactaaacac
actagtgaagagacaaaatctgtagacaaaaatctgatgaaggatcgggagaaacatgca
ttggaagcaaggaacaataaggaggcaagtggcaataaattactttatatacttaaccca
ccagacccacagattgaaaaagctgagcaagttcctactgtttcagccgacaagaatgcc
atcaagcctaaaccccagttaagtcactcctcaagactttcctcagacttaactagagaa
actgatgaggctgcctttgaaccagactataacgaaagtgacagcgaaagcaatgtatcc
atcaaagaggaagaaactcccgggaaaaatcctaaggaacagaaagagaaagtggtggag
aaagcaaaagagattgtcgaccccgcagcagtcagccagacaggcgtccccaggagccag
agccagagcagtcccagcgttagcccaagcagaagtcacagcccttcaggaagccagacc
cgaagtcacagcagcagtgccagctccgcagagagccaggacagcaagaagaagaagaaa
aagaaggagaagaaaaagcacaagaaacataaaaaacacaagaagcataagaagcacgca
ggcaccgaagtcgaattggaaaaaggccaaaaacataaacacaagaagaagaagtcaaag
aaaaacaaagataaagaaaaggagaaggagaaagatgaccaaaaagtgaaatctgtcact
gtgtga
DBGET
integrated database retrieval system
