Sorex araneus (European shrew): 101548703
Help
Entry
101548703 CDS
T07854
Symbol
TAF5L
Name
(RefSeq) TAF5-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 5L
KO
K03130
transcription initiation factor TFIID subunit 5
Organism
sara
Sorex araneus (European shrew)
Pathway
sara03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
sara00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
101548703 (TAF5L)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sara03021
]
101548703 (TAF5L)
03036 Chromosome and associated proteins [BR:
sara03036
]
101548703 (TAF5L)
Transcription machinery [BR:
sara03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
101548703 (TAF5L)
Coactivators
SAGA/TFTC/STAGA complex
101548703 (TAF5L)
Chromosome and associated proteins [BR:
sara03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
101548703 (TAF5L)
STAGA complex
101548703 (TAF5L)
TFTC complex
101548703 (TAF5L)
SAGA complex
101548703 (TAF5L)
SLIK complex
101548703 (TAF5L)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_Prp19
Beta-prop_CAF1B_HIR1
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_EML_2
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
TFIID_NTD2
EIF3I
WDR55
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
Beta-prop_TEP1_C
Beta-prop_WDR75_1st
WD40_MABP1-WDR62_1st
ANAPC4_WD40
WDR90_beta-prop_4th
Beta-prop_SCAP
Beta-prop_IFT122_1st
Beta-prop_RIG_2nd
Beta-prop_IFT140_1st
NBCH_WD40
Beta-prop_SPT8
Beta-prop_HPS5
Beta-prop_DCAF4
Beta-prop_Vps41
Beta-prop_EIPR1
Beta-prop_WDR19_1st
WD40_RFWD3
PEP5_VPS11_N
PROPPIN
Beta-prop_IP5PC_F
eIF2A
Ge1_WD40
WD_LRWD1
Nbas_N
Mala_s_1-like
vATP-synt_AC39
Motif
Other DBs
NCBI-GeneID:
101548703
NCBI-ProteinID:
XP_004619063
LinkDB
All DBs
Position
Unknown
AA seq
589 aa
AA seq
DB search
MKRVRTEQIQMAVSCYLKRRQYVDSDGPFKQGLRLSQTAEEMAANLTVQSESGCANIVSA
APCQAEPQQYEVQFGRLRNFLTDSDSQHSHEVMPLLYPLFVYLHLNLVQNSPKSTVESFY
SRFHGMFLQNASQKDVIEQLQTTQTIQDILSNFKLRAFLDNKYVVRLQEDSYNYLIRYLQ
SDNNTALCKVLTLHIHLDVQPAKRTDYQLYASGSSSRSDGNGLEPTDMPAPILQNEAALE
VLQESIKRVKDGPPSLTTICFYAFYNTEQLLNTAEISPDSKLLAAGFDNSCIKLWSLRSR
KLKSEPHQVDVSRIHLACDILEEEDDEDDNAGTEMKILRGHCGPVYSTRFLADSSGLLSC
SEDMSIRYWDLGSFTNTVLYQGHAYPVWDLDISPYSLYFASGSHDRTARLWSFDRTYPLR
IYAGHLADVDCVKFHPNSNYLATGSTDKTVRLWSAQQGNSVRLFTGHRGPVLSLAFSPNG
KYLASAGEDQRLKLWDLASGTLYKELRGHTDNITSLTFSPDSSLIASASMDNSVRVWDIR
NTYCSAPADGSSSELVGVYTGQMSNVLSVQFMACNLLLVTGITQENQEH
NT seq
1770 nt
NT seq
+upstream
nt +downstream
nt
atgaaacgagtgcgcaccgagcagattcagatggcagtgtcctgctacctcaaacgccgg
caatacgtggactcggacggtcccttcaagcaaggactgcggctttcacagactgctgaa
gagatggcagccaatctcacagttcaatcagaatctggttgtgccaacatagtgtctgca
gccccttgccaggcagagccccaacaatatgaagtacagtttggacgactgaggaatttt
ctcactgattctgactcccaacatagccacgaagttatgcctctcctctatcctctcttt
gtctacctccatctaaacctggtccagaacagtccgaaaagcacagtggaaagtttttac
agccgcttccatggaatgtttctgcagaatgctagccagaaggatgtcattgagcagcta
cagaccactcaaaccatccaggacatcctgtctaacttcaagcttcgagcattcctagat
aacaaatacgtggtccgtctccaagaagacagctacaactaccttatccgctacctccaa
agtgacaacaataccgctctgtgcaaagtcctcaccttgcatatccatcttgacgtgcag
cccgccaagagaacagactaccagctgtatgccagtggcagttcctcacgaagtgatggc
aatggcttagagcccactgacatgcctgcccccattctgcagaatgaggctgccctggaa
gtcttgcaggagagcattaagcgtgtcaaggatggccctccctcccttaccaccatctgt
ttctatgccttctataatacggaacagctgttgaacactgcagaaatctccccagatagc
aagttgcttgctgctgggtttgacaactcctgtattaaactgtggagtttacgatccagg
aagttaaaatcagaaccccatcaagttgacgtttcccgcattcacttggcttgtgatatt
ttggaggaggaggatgatgaggatgataatgcaggcacagaaatgaagatcctacggggg
cactgtggaccagtgtacagtacgaggttcctcgcagacagctcagggttgctctcttgc
tcagaagacatgtccattcggtactgggacctcgggagtttcaccaacactgtgttgtac
caaggacatgcctaccctgtgtgggacctggacattagcccgtacagcctgtacttcgcc
agcggttcccacgaccgcacggcaaggctctggtcatttgatcggacgtaccctctgaga
atatacgcaggacacctggcagacgtggactgcgtcaaattccaccctaattcaaactac
ttagctacaggctctactgacaagactgttcggctgtggagtgctcagcaggggaactcg
gtgaggctcttcacaggccaccgtggccctgtgctctctcttgccttctctcccaatggt
aagtacttggcgtccgccggcgaggaccagcgtttgaagctgtgggacttggcatctggg
accctttataaagaactgagaggccacacagacaatatcaccagcctcaccttcagtccg
gacagcagcctgattgcctctgcgtccatggacaactccgtgcgcgtctgggacattaga
aacacgtactgcagcgcaccggccgatggctcctccagcgaactcgtgggtgtgtatact
gggcagatgagcaatgtactgagcgtgcagttcatggcctgtaacctcctgctagtgacg
ggaatcacacaagaaaatcaggaacattaa
DBGET
integrated database retrieval system
