Sorex araneus (European shrew): 101548815
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Entry
101548815 CDS
T07854
Symbol
PUM1
Name
(RefSeq) pumilio homolog 1 isoform X1
KO
K17943
pumilio RNA-binding family
Organism
sara
Sorex araneus (European shrew)
Pathway
sara05017
Spinocerebellar ataxia
Brite
KEGG Orthology (KO) [BR:
sara00001
]
09160 Human Diseases
09164 Neurodegenerative disease
05017 Spinocerebellar ataxia
101548815 (PUM1)
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Motif
Pfam:
PUF
PUF_NOP9
DUF6922
CFAP61_N
Motif
Other DBs
NCBI-GeneID:
101548815
NCBI-ProteinID:
XP_004603594
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All DBs
Position
Unknown
AA seq
1224 aa
AA seq
DB search
MPLPSLALGPEPIPGCTAPAQSPVGRHVVGVKGVGGMSVACVLKRKAVLWQDSFSPHLKH
HPQEPANPNMPVVLTSGTGSQAQPQPAANQALAAGTHSSPVPGSIGVAGRSQDDAMVDYF
FQRQHGEQLGGGGSGGGGYNNSKHRWPTGDNIHAEHQVRSMDELNHDFQALALEGRAMGE
QLLPGKKFWETDESSKDGPKGIFLGDQWRDSAWGTSDHSVSQPIMVQRRPGQSFHVNSEV
NSVLSPRSESGGLGVSMVEYVLSSSPGDSCLRKGGFGPRDADSDENDKGDKKNKGTFDGD
KLGDLKEEGDVMDKTNGLPVQNGIDADVKDFSRTPGNCQNSANEVDLLGPNQNGSEGLAQ
LTSTNGAKPVEDFSNMESQSVPLDPMEHVGMEPLQFDYSGTQVPVDSAAATVGLFDYNSQ
QQLFQRPNALAVQQLTAAQQQQYALAAAHQPHIGLAPAAFVPNPYIISAAPPGTDPYTAG
LAAAATLGPAVVPHQYYGVTPWGVYPASLFQQQAAAAAAATNSANQQTTPQAQQGQQPVL
RGGASQRPLTPNQNQQGQQTDPLVAAAAVNSALAFGQGLAAGMPGYPVLAPAAYYDQTGA
LVVNAGARNGLGAPVRLVAPAPVIISSSAAQAAVAAAAASANGAAGGLAGTTNGPFRPLG
TQQPQPQPQQQPSNNLASSSFYGSNSLSSNSQSSSLFSQGSAQPANTSLGFGSSSSLGAT
LGSALGGFGTAVANSNTGSGSRRDSLTGSSDLYKRTSSSLTPIGHSFYNGLSFSSSPGPV
GMPLPSQGPGHSQTPPPSLSSHGSSSSLNLGGLTNGSGRYISAAPGAEAKYRSASSASSL
FSPSSTLFSSSRLRYGMSDVMPSGRSRLLEDFRNNRYPNLQLREIAGHIMEFSQDQHGSR
FIQLKLERATAAERQLVFNEILQAAYQLMVDVFGNYVIQKFFEFGSLEQKLALAERIRGH
VLSLALQMYGCRVIQKALEFIPSDQQVINEMVRELDGHVLKCVKDQNGNHVVQKCIECVQ
PQSLQFIIDAFKGQVFALSTHPYGCRVIQRILEHCLPDQTLPILEELHQHTEQLVQDQYG
NYVIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKFASNVVEKCVTHASRTERAVLIDEVC
TMNDGPHSALYTMMKDQYANYVVQKMIDVAEPAQRKIVMHKIRPHIATLRKYTYGKHILA
KLEKYYMKNGVDLGPICGPPNGII
NT seq
3675 nt
NT seq
+upstream
nt +downstream
nt
atgccgctgccatcgctggcgctggggccagagcctatcccaggatgcaccgcgccagcc
cagtccccagtgggccgccatgttgtcggagtgaaaggtgttggtggaatgagcgttgca
tgtgtcttgaagagaaaagcagtgctttggcaggactctttcagcccccacctgaaacat
caccctcaagaaccagctaatcccaacatgcctgttgttttgacatctggaacagggtcg
caagcgcagccacaaccagctgcaaatcaggctcttgcagctgggacacactccagccct
gtcccaggatccataggagttgcaggccgttcccaggacgacgctatggtggattacttc
tttcagaggcagcatggtgagcagcttgggggaggaggaagtggtggaggcggctataat
aatagcaaacatcgatggcctactggggataacattcatgcagaacatcaggtgcgttct
atggacgagctgaatcatgattttcaagcacttgctctggagggaagagctatgggagag
cagctcttgccaggtaaaaagttttgggaaacagatgaatccagcaaagatggaccaaaa
ggaatattcctgggtgatcaatggcgagacagtgcctggggaacatcagatcattcagtt
tcccagccaatcatggtgcagagaagacctggtcagagtttccatgtgaacagtgaggtc
aattctgtactgtccccacggtcggagagtgggggactaggcgttagcatggtggagtat
gtgttgagctcatccccgggcgattcctgtctaagaaaaggaggatttggcccaagggat
gcagacagtgatgaaaacgacaaaggtgacaagaagaacaagggtacgtttgatggagat
aagctaggagatttgaaggaggagggtgatgtgatggacaagaccaatggtttaccagtg
cagaatgggattgacgcagacgtcaaagattttagccgtacccctggtaattgccagaac
tctgctaatgaagtggatcttctgggtccaaaccagaatggttctgagggcttagcccag
ctgaccagcaccaatggtgccaagcctgtggaggatttctccaacatggagtcccagagt
gtccccttggaccccatggaacatgtgggcatggagcctcttcagtttgattattcaggc
acgcaggtacctgtggactcagcagcagcaactgtgggactttttgactacaattctcaa
caacagctgttccaaagacctaatgcgcttgctgtccagcagttgacggctgctcagcaa
cagcagtatgccctcgcagctgcgcaccagccgcacattggtttagctcccgctgcattt
gtccctaatccatacatcatcagcgctgctccccctgggacggacccctacacagctgga
ttggctgcagcagcaacactagggcctgctgtggttcctcaccagtattatggagttact
ccatggggcgtctaccctgcgagtcttttccagcagcaagcggctgcggctgccgctgcc
actaactctgctaatcagcagaccaccccacaggctcagcaagggcagcagccggttctc
cgtggaggagccagccagcgtcctttgaccccaaatcagaaccagcagggacaacaaaca
gatccactagtggcagctgcagcagtgaattctgcccttgcttttggacaaggactggct
gcaggcatgccaggttatccagtcttggctcctgcagcttactatgaccaaactggtgca
cttgtagtaaatgcaggagcaagaaatggtcttggagctcctgttcgacttgtagctcct
gccccagtcatcattagttcctcagctgcacaagcagctgttgcagcggctgcagcttca
gcaaacggagcagctggtggtcttgccggaacaacaaatggaccatttcgccctttagga
acccagcagcctcaaccccagccccagcagcagcccagcaacaacctggcatccagctct
ttctatggcagcaactccctgagcagcaattcccagagcagctccctcttctcccagggc
tcggcccagcctgccaacacatcgttgggatttggtagcagcagctccctgggcgccacg
ctgggatcagcccttggaggatttggaacagcagttgcaaactccaacactggcagtggc
tcccgccgtgattccctgactggcagcagtgacctttataagaggacatcgagcagcttg
acccccattggacacagtttttataacggccttagcttttcctcctctcctggacccgtg
ggcatgcctctccctagtcagggaccaggacattcacagacaccacctccttccctctct
tcacatggatcctcttcaagcttaaacctgggaggactcaccaatggcagtggacgctac
atctccgctgcgccaggcgctgaagccaagtaccgcagcgccagcagtgcctccagcctc
ttcagtcccagcagcacccttttctcctcctctcgcttgcggtatggaatgtctgatgtc
atgccctctggcaggagccggcttttggaagactttcgaaataaccggtaccccaattta
caacttcgggagattgctgggcatataatggaattttcccaagaccagcatgggtccagg
ttcattcagctgaaactggagcgtgccacggcagctgagcgccagcttgtcttcaatgaa
atcctccaggctgcttaccagctaatggtagatgtatttggaaattacgtcattcagaag
ttctttgaatttggcagccttgaacagaagctggcattggcagaacgaattcggggccat
gtcctgtcattggcgctacagatgtatggctgccgtgttatccagaaagcacttgaattt
attccctcagaccagcaggtaattaatgagatggttcgggaactggatggccacgtccta
aagtgcgtgaaagaccagaatggcaaccacgtggtccagaagtgcattgagtgtgtgcag
ccccagtctttgcagttcattatcgacgcatttaaggggcaggtatttgctttgtccact
catccttacggctgccgagtgattcagaggatcctggagcactgtctccctgaccagaca
ctccctattttagaggagcttcaccagcacacagagcaacttgtgcaggatcaatatgga
aattatgtaatccagcatgtattggaacatggtcgccctgaagataaaagtaaaattgta
gcagaaattcggggcaatgtacttgtactgagtcaacacaagtttgcaagcaacgttgtg
gagaagtgtgtcactcacgcctcccgcacagagcgcgctgtgcttattgatgaggtgtgc
accatgaatgacggtccccacagtgccttatacaccatgatgaaggaccagtacgccaac
tacgtagtccagaagatgatcgatgtggcggagcccgcacagcggaagattgtcatgcat
aagatccggccccacatcgcaactctccgcaagtacacctatggcaagcacatcctggcc
aagctggagaagtactacatgaagaacggcgttgacttggggcccatctgtggccccccc
aatggtattatctga
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