Sorex araneus (European shrew): 101548931
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Entry
101548931 CDS
T07854
Symbol
SOX13
Name
(RefSeq) transcription factor SOX-13
KO
K09269
transcription factor SOX5/6/13 (SOX group D)
Organism
sara
Sorex araneus (European shrew)
Brite
KEGG Orthology (KO) [BR:
sara00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sara03000
]
101548931 (SOX13)
Transcription factors [BR:
sara03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
101548931 (SOX13)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
AAA_23
Motif
Other DBs
NCBI-GeneID:
101548931
NCBI-ProteinID:
XP_012788563
LinkDB
All DBs
Position
Unknown
AA seq
621 aa
AA seq
DB search
MSMRSPGSAQLALDGAGTMVNCTVKPEGRKDVCLEAPPGSAATAASESQPGDSARAPQDG
ADPQAPAQCVGQDRSSPESRGSPEPKRPSGSDGASGSQEKLDFNRNLKEVVPAIEKLLSS
DWKERLLGRSSVETKDVKGTQESLAEKELQLLVMIQQLSTLRDQLLAAHSEQKNMAAMLF
EKQQQQMELARQQQEQIAKQQQQLIQQQHKINLLQQQIQQVNMPFVMIPAFPPSHQPLSV
PTDSQLPLPIQPIPCKPVEYPLQLLHSPPAPMVKRPGAVGAHHALQEPPQPLNLTAKPKA
PELPNTASSPSLKMSSCGPRPPSHGAPTRDLQSSPPSLPLGFLGEGDAVSKAIQDARQLL
HSHGGALDSSPSTPFRKDLISLDSSPAKERLEEGCGHPLEEAMLGCDVDGSRHFPESRNS
SHIKRPMNAFMVWAKDERRKILQAFPDMHNSSISKILGSRWKSMSNQEKQPYYEEQARLS
RQHLEKYPDYKYKPRPKRTCIVEGKRLRVGEYKALMRTRRQDARQSYVAPPPAGQVAMSA
SEVLYPRVAGVPLAQPLVEHFVPRSLDPNMPVIVNTCSLREEAEGTEDRHSGADGEMYRY
SEDEDSEGEEKSDGELVVLTD
NT seq
1866 nt
NT seq
+upstream
nt +downstream
nt
atgtccatgaggagccctggctctgcccagctggccctagacggtgctggcactatggtg
aactgcacagtcaagcccgaggggcgcaaggatgtctgcctcgaggccccgcctggctca
gccgccaccgctgcctccgaatcccagcctggagactccgcgcgggcaccccaggatggt
gctgacccccaggctccagcccagtgtgtcgggcaggatcgcagctcgcccgagagccga
gggtctccagagcccaagagaccctcaggctccgacggggcttccggaagccaggagaag
ctggacttcaaccggaatttaaaggaagtggtgccggccatcgagaagctgctgtccagt
gactggaaggagaggcttctgggacggagctctgtggaaaccaaagacgtcaaagggact
caggagagcctggcggagaaggagctgcagctcctggtgatgatccagcagctgtccacc
ctgcgggaccagctcctggccgcccactcggagcagaagaacatggccgccatgctcttc
gagaagcagcagcagcagatggagctggcgcggcagcagcaggagcagatcgccaagcag
cagcagcagctcatccagcagcagcacaagatcaacctcctgcagcagcagatccagcag
gtcaacatgcctttcgtcatgatcccggccttcccccccagccaccagcccctgtccgtg
cccaccgactcccagctgcccttgcccatccagcccatcccctgcaagccagtggagtac
ccgctgcagctgctgcacagcccccccgcgcccatggtgaagcggcccggggccgtgggc
gcccaccacgccctgcaggagcccccgcagcccctgaacctcacagccaagcccaaggcc
ccggagctgcccaacacggccagctcccccagcctgaagatgagcagctgcgggccccgg
ccgcccagccacggggcccccacgcgggacctgcagtccagccccccgagcctgcctttg
ggcttcctgggcgagggggacgcggtcagcaaagccatccaggatgcccggcagctgctg
cacagccacggcggcgccctggacagctcgcccagcacccccttccgcaaggacctcatc
agcctggactcgtccccggccaaggagcggctggaggagggctgtgggcacccgctggag
gaggccatgctgggctgtgacgtggacggctcccgccacttccccgagtctcggaacagc
agccacatcaagaggcccatgaacgccttcatggtgtgggccaaggacgagcgcaggaag
atcctgcaggccttccccgacatgcacaactccagcatcagcaagatcctcggctcccgc
tggaagtccatgagcaaccaggagaagcagccctactacgaggagcaggcgcggctgagc
cggcagcacctggagaagtacccggactacaagtacaagccgaggcccaagcgcacctgc
atcgtggagggcaagaggctgcgggtgggcgagtacaaggcgctgatgaggacccggcgc
caggacgcgcgccagagctacgtggcccccccgccagccggccaggtggccatgagcgcc
tcggaggtgctgtacccgcgggtggcgggcgtgccgctggcccagcccctggtggagcac
ttcgtgccgcggagcctggaccccaacatgcccgtcatcgtcaacacctgcagcctgcgc
gaggaggccgagggcacggaggacaggcactcgggggccgacggcgagatgtaccggtac
agcgaggacgaggactcggagggcgaggagaagagcgacggggagctggtggtgctcacg
gactga
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