Sorex araneus (European shrew): 101548957
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Entry
101548957 CDS
T07854
Symbol
TPM1
Name
(RefSeq) tropomyosin alpha-1 chain isoform X1
KO
K10373
tropomyosin 1
Organism
sara
Sorex araneus (European shrew)
Pathway
sara04260
Cardiac muscle contraction
sara04261
Adrenergic signaling in cardiomyocytes
sara04814
Motor proteins
sara04820
Cytoskeleton in muscle cells
sara05206
MicroRNAs in cancer
sara05410
Hypertrophic cardiomyopathy
sara05414
Dilated cardiomyopathy
Brite
KEGG Orthology (KO) [BR:
sara00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
101548957 (TPM1)
04820 Cytoskeleton in muscle cells
101548957 (TPM1)
09150 Organismal Systems
09153 Circulatory system
04260 Cardiac muscle contraction
101548957 (TPM1)
04261 Adrenergic signaling in cardiomyocytes
101548957 (TPM1)
09160 Human Diseases
09161 Cancer: overview
05206 MicroRNAs in cancer
101548957 (TPM1)
09166 Cardiovascular disease
05410 Hypertrophic cardiomyopathy
101548957 (TPM1)
05414 Dilated cardiomyopathy
101548957 (TPM1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
sara04812
]
101548957 (TPM1)
04147 Exosome [BR:
sara04147
]
101548957 (TPM1)
Cytoskeleton proteins [BR:
sara04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Tropomyosins
101548957 (TPM1)
Exosome [BR:
sara04147
]
Exosomal proteins
Exosomal proteins of microglial cells
101548957 (TPM1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Tropomyosin
Laminin_II
CLZ
CCDC39
TMF_DNA_bd
DUF4200
DUF3450
Sec2p
HAUS1
Rod_CreS
CENP-F_leu_zip
PUMA_CC
DUF1664
ADIP
Laminin_I
FKBP15
ATG16
ERM_helical
DUF745
TMP_N
Fib_alpha
Motif
Other DBs
NCBI-GeneID:
101548957
NCBI-ProteinID:
XP_004616742
LinkDB
All DBs
Position
Unknown
AA seq
326 aa
AA seq
DB search
MDAIKKKMQMLKLDKENALDRAEQAEADKKAAEDRSKQLEDDIVAKEKLLRASEDERDRV
LEELHRAEDSLLAADETAAKLEDELVSLQKKLKGTEDELDKYSEALKDAQEKLELAEKKA
TDAEADVASLNRRIQLVEEELDRAQERLATALQKLEEAEKAADESERGMKVIESRAQKDE
EKMEIQEIQLKEAKHIAEDADRKYEEVARKLVIIESDLERAEERAELSEGKCAELEEELK
TVTNNLKSLEAQAEKYSQKEDKYEEEIKALSDKLKEAETRAEFAERSVTKLEKSIDDLEE
KVAHAKEENLSMHQMLDQTLLELNNM
NT seq
981 nt
NT seq
+upstream
nt +downstream
nt
atggacgccatcaagaagaagatgcagatgctgaagctcgacaaggagaacgccttggac
cgagccgagcaggccgaggccgacaaaaaggcggccgaggaccgaagcaaacagctggaa
gatgacatcgtggccaaggagaagctgctgcgggcgtcggaagatgagcgggaccgggtg
ctggaggagctgcaccgggccgaggacagcctcctggccgccgacgagaccgccgccaag
ctggaagacgagctggtgtcactgcaaaagaaactcaagggcactgaagatgagctggac
aaatactctgaggctctcaaagatgcccaggagaagctggagctggcggagaaaaaggcg
accgacgcggaagctgatgtggcctccctgaacagacgcatccagctggttgaggaagag
ctggatcgtgcccaggagcgcctggccactgccctgcagaagctcgaggaggctgagaag
gccgcagatgagagcgagagaggcatgaaagtcattgaaagccgagcccaaaaagatgag
gagaaaatggaaattcaggagatccagctgaaagaggccaaacatattgctgaggacgct
gaccgcaagtatgaggaggtggcccggaagctggtcattattgagagtgacctggagcgt
gcagaggagcgggccgagctctcggaaggcaaatgtgccgagcttgaagaagaattgaaa
actgtgaccaacaacctcaagtccctggaggctcaagccgagaagtactcacagaaggaa
gacaaatacgaggaagagatcaaggccctttccgacaagctgaaggaggctgagactcgg
gctgagttcgcagagcggtcagtaactaaattggagaaaagcattgatgacttggaagag
aaagtggcccatgccaaggaagaaaaccttagcatgcaccagatgctggatcagacttta
ctggagttaaacaacatgtga
DBGET
integrated database retrieval system
