Sorex araneus (European shrew): 101549244
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Entry
101549244 CDS
T07854
Symbol
BARD1
Name
(RefSeq) BRCA1-associated RING domain protein 1
KO
K10683
BRCA1-associated RING domain protein 1
Organism
sara
Sorex araneus (European shrew)
Pathway
sara03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sara00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
101549244 (BARD1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sara03019
]
101549244 (BARD1)
04121 Ubiquitin system [BR:
sara04121
]
101549244 (BARD1)
03036 Chromosome and associated proteins [BR:
sara03036
]
101549244 (BARD1)
03400 DNA repair and recombination proteins [BR:
sara03400
]
101549244 (BARD1)
Messenger RNA biogenesis [BR:
sara03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Negative regulators of mRNA 3' end processing
101549244 (BARD1)
Ubiquitin system [BR:
sara04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
101549244 (BARD1)
Chromosome and associated proteins [BR:
sara03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
101549244 (BARD1)
DNA repair and recombination proteins [BR:
sara03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-core complex
101549244 (BARD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_6
Ank_4
Ank
Ank_2
Ank_3
Ank_5
BRCT
BRCT_2
zf-RING_5
Ank_KRIT1
ANK_LRRK2
zf-C3HC4
zf-C3HC4_2
zf-RING_2
RTT107_BRCT_5
Prok-RING_4
Motif
Other DBs
NCBI-GeneID:
101549244
NCBI-ProteinID:
XP_012788907
LinkDB
All DBs
Position
Unknown
AA seq
807 aa
AA seq
DB search
MLAKANEISHNNENNSYEKNEKLQVLVRNLAHSYKNGVNIVSKAISKYLDASSDLDDFAD
DIDTTCKSEAAACQRVHSHILRDPVCLGGCEHIFCSNCVSDYIGSKCPVCSTPAWIQDVK
INRQLDSMIQLCSKLRSLIYGSKVSDLKEDAARTNLFSDSENKRNSIKMWFSPRSKKVRY
VVSKLSVQTRPQIENDENGQEASMYEFVSATPPTVPEKPKRTAARSGRKKKKKTLAEINQ
KWNLAAGREGGAGGPEEARERQVSFCSQPAVIASPRANGGPDSEASASDTASPFCASPPE
VSFLLADEVVSPETEGRKEVVTPKEMLCDKHPTPRKPFASCLNGKRDRHNRLSAPIPKRS
RRTTLPGPHGDSANSATPAVVSENEPPPGCPPPPSSGPQAGGTPRRTRSSVLDESFRFSP
GTPPSALSSASYRRMLSSPSARKLAPGSQAAVKRNHRGETLLHLASIKGDVPSVEYLLQN
GNDPNVKDHAGWTPLHEACNHGHLQVVELLLQHQALVNTTGYQNDSPLHDAVKNGHTDIV
KLLLSSGASRDAVNIFGLRPVDYADSENMKSLLLLPVKTESSSTGHGSPANTGQRRSGPL
ILIGSGLSSEQQKMLTELAAVLKAKKCAEFDNTVTHVIVPGDTVQSTLKCMLGILNGCWI
LNFEWVKACLQKKEWEQEEKYEIPEGPQRSRLNREQLLPKLFDGCYFYFGGTYRHHPKDH
LMKLATAAGGQILLRKPKPDSDVTQTVNTVAYHAKPDSDQRFCTQYIIYEDLSIHRPERV
RRGKVWVASSSWLIDCIISFDLLPLGS
NT seq
2424 nt
NT seq
+upstream
nt +downstream
nt
atgttagccaaagccaatgagatatctcacaataacgagaataactcatatgagaaaaat
gagaaactacaagtgttagtgagaaatttggcacattcctacaagaatggagttaacatc
gtttcaaaagccatctcaaaatacctagatgcttctagcgacttggatgattttgccgat
gacattgacaccacctgcaaatcagaggcagcagcatgtcaaagagttcactctcacatt
ctccgggatcctgtgtgtttaggaggctgtgagcacatcttctgtagtaattgtgtgagt
gactacattggaagcaaatgtccagtatgttctactccagcctggatacaagatgtcaag
ataaatagacaattggacagcatgatccagctttgtagcaagcttcgaagtttgatttat
ggcagtaaggtttcagatctgaaagaagatgcagctaggacaaatttgttttctgactca
gaaaataagaggaattcaataaaaatgtggtttagtccccggagcaagaaggtcagatac
gttgtgagtaaactttcagtgcaaacccggcctcagatagaaaatgatgaaaatggtcag
gaggcctccatgtatgaatttgtttctgcaactcccccaacagttcctgagaagcctaag
aggactgcggcaagatcggggaggaagaaaaagaagaaaacgttagcggaaatcaaccag
aagtggaacttagcggcgggaagagaaggcggggcggggggcccggaggaggcgcgggag
aggcaggtctccttctgcagccagccggccgtcatcgccagcccgcgggccaacgggggc
ccagactcagaagccagcgcttccgacacagcgtctccgttttgtgccagcccgcccgaa
gtctctttcctgttggccgatgaagtcgtgtccccggagaccgagggtaggaaggaagtc
gtgactcccaaggagatgctctgtgacaagcatcccacccccaggaagcccttcgcttcc
tgtcttaacggaaagcgggaccgtcacaacaggctctcagcgcccatcccgaagagatct
cgccgcaccacccttcccgggccccacggggactcggccaactcggccacgccagcagtg
gtctcagaaaacgagccgccgcccggttgtcctccgccaccctcgagtggcccgcaagct
ggtggcacgccgaggaggacacgcagtagcgtgttggatgagtcctttaggttctcaccc
ggcacgccgccctccgcgctcagcagtgccagctacaggcggatgttatccagcccctcg
gccaggaagctggcaccgggcagccaggcggccgtgaagaggaatcacaggggggagact
ctgctccatctcgcttccatcaagggcgacgtgccttctgttgaatacctcttacaaaac
ggaaatgacccaaatgtcaaggaccacgctggatggactccattgcacgaggcctgcaat
cacgggcacctgcaggtagtggaactgttgctgcagcaccaggccttagtgaacaccacc
gggtatcagaatgactcaccgctgcatgacgcggtcaagaatggccatacggacatagtc
aagttgctcctttcctccggggcctctcgggatgctgttaacatatttggtctgcggcct
gtggattatgcagacagtgaaaatatgaaatcactattgctgctcccagtgaagactgaa
tcatcatcaacgggccacggctcaccggcaaacactggtcagcgcaggagcggtcctctg
atacttataggcagtggactttcttcagaacaacagaagatgctcactgaacttgcagca
gttctgaaagctaaaaaatgtgctgagtttgataatacagtaacgcatgtcattgttcct
ggcgacacagtccaaagtactctgaaatgtatgcttgggattctcaatggatgctggatt
ctaaacttcgaatgggtaaaagcatgtctacaaaagaaagaatgggaacaggaagaaaag
tatgaaattcctgaaggacctcagagaagcaggctcaacagggaacagctgttgccaaag
ctgtttgatggatgctacttctattttgggggaacctacagacaccatccgaaggaccat
ctgatgaagctggccaccgcggcggggggccagattctcctccggaagcccaagccagac
agcgacgtgacgcagaccgtcaacacggtggcttaccatgccaagcccgactctgatcag
cgcttctgcacccagtacatcatctacgaggacttgtctattcaccgcccggagagggtg
cggcggggcaaggtctgggtggcttcctccagctggctgatagattgcatcatctccttt
gacctgctccctcttggcagctga
DBGET
integrated database retrieval system
