KEGG   Sorex araneus (European shrew): 101549416
Entry
101549416         CDS       T07854                                 
Symbol
PNKP
Name
(RefSeq) bifunctional polynucleotide phosphatase/kinase
  KO
K08073  bifunctional polynucleotide phosphatase/kinase [EC:3.1.3.32 2.7.1.78]
Organism
sara  Sorex araneus (European shrew)
Pathway
sara03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:sara00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    101549416 (PNKP)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:sara01009]
    101549416 (PNKP)
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:sara03400]
    101549416 (PNKP)
Enzymes [BR:sara01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.1  Phosphotransferases with an alcohol group as acceptor
    2.7.1.78  polynucleotide 5'-hydroxyl-kinase
     101549416 (PNKP)
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.3  Phosphoric-monoester hydrolases
    3.1.3.32  polynucleotide 3'-phosphatase
     101549416 (PNKP)
Protein phosphatases and associated proteins [BR:sara01009]
 HAD phosphatases
  Other HAD phosphatases
   101549416 (PNKP)
DNA repair and recombination proteins [BR:sara03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Other BER factors
     101549416 (PNKP)
SSDB
Motif
Pfam: PNK3P FHA_2 AAA_33 HAD Hydrolase_6 Zeta_toxin Viral_helicase1 AAA_17 TSP1_spondin
Other DBs
NCBI-GeneID: 101549416
NCBI-ProteinID: XP_004619910
LinkDB
Position
Unknown
AA seq 519 aa
MADAQTQGRLWLESPSGGAPPIFLPLDGKALVLGRGPVTQVTDRKCSRNQVELLADLETR
TVAVKQLGVNPSTAGTQVLKPELQGSLGVGDTLYLVNGLYPLTLRWEERPPDGSQPDTPP
GTPPAAPEEDIKQPSKRMRKASPGWESLEKLLVFTAPGVTARGKVAAFDLDGTLICTQSG
KVFPSGPTDWRILYPEIPKKLQELQADGYKLVIFTNQMGIGRGKLPAEEFKGKVEAVLEK
LGVPFQVLVATHAGLYRKPVTGMWDYLQEQANEGVPISLTDSIFVGDAAGRPANWAPGRK
KKDFSCADRLFALNLSLPFATPEEFFLKWPVAAFELPAFDPRTVSPSGPLCLPESSSLLS
ADPEVVVAVGFPGAGKSTFVQKHLVSAGYVHVNRDSLGSWQRCVSTCEAALKQKKRVVID
NTNPDIPTRARYLKCAQDAGVPCRCFLFNATLEQARHNNRFREMTDSSHAHVSDMVLYSY
RKQFEAPTLAEGFSAILEIPFRLHLEPQLERLYRQFSEG
NT seq 1560 nt   +upstreamnt  +downstreamnt
atggccgacgcacagacccagggtcgtctgtggctggagagcccctctggaggagcgcct
cccatcttcctgcccttggacgggaaagccctggtcctgggccggggtcccgtgacccaa
gttaccgaccggaagtgttcgagaaaccaagtggagctgctcgcagacctggagacccgg
accgtggcagtgaaacagctgggagttaacccttcaactgctgggacgcaagtgctgaaa
cctgaattgcagggctctttgggggtgggggacacgttgtatttggtcaacggcctctat
cccctgaccctgcgctgggaagagaggcccccagatggatcccagcccgacactccaccg
ggcaccccgccagcagccccagaggaggacatcaagcagccgagtaagcgcatgcggaag
gcatctccgggctgggagagcctggagaagctgctggtgttcacggcccccggtgtgaca
gcccgaggcaaggtggccgcctttgatctggacgggacactcatctgcacccaaagtggg
aaagtctttccctcgggccccactgactggaggatcctgtatcccgagattccaaagaaa
cttcaggagctgcaggctgatggttacaagctggtgatcttcactaaccagatgggcatc
ggccgggggaagctgcctgcagaggagttcaagggcaaggtggaggcagtgctggagaag
cttggggtcccttttcaggtgctcgtggccacacatgcaggcttgtaccggaagcctgtg
accggcatgtgggactatctgcaagaacaggccaatgagggtgtgcccatatccctcacg
gacagcatcttcgtgggagatgctgccggtagacccgccaactgggcccctgggcggaag
aagaaggacttctcctgtgctgaccgcctgtttgccctcaacctcagcctgcccttcgcc
acaccggaggaattctttctcaagtggcccgtagcagccttcgagctcccagccttcgac
ccgagaactgtgtccccgtcagggccactctgcctccccgagtccagctccctcctgagc
gctgacccagaggtggtggtcgctgtgggattcccaggggctgggaagtccaccttcgtc
cagaagcacctcgtgtctgcaggctacgtccatgtgaacagggattcgctgggttcctgg
cagcgctgtgtatccacctgtgaggcagctctgaagcagaagaaacgggtcgtcatcgac
aacaccaaccctgacatcccaactcgagccagatacctcaagtgtgcccaggacgcaggc
gtgccctgccgctgtttcctcttcaatgccaccctggagcaggcacgccacaacaaccgg
ttccgggagatgacggattcatcgcatgcccacgtgtcggatatggtcttgtacagctac
aggaagcagtttgaggcccccacactggcagaaggcttctcagctatcctggagatcccc
ttccgcctgcacctggagccccagcttgagcggctgtaccgccagttctcggagggctaa

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