Sorex araneus (European shrew): 101549477
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Entry
101549477 CDS
T07854
Symbol
TOP3A
Name
(RefSeq) DNA topoisomerase 3-alpha
KO
K03165
DNA topoisomerase III [EC:
5.6.2.1
]
Organism
sara
Sorex araneus (European shrew)
Pathway
sara03440
Homologous recombination
sara03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
sara00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
101549477 (TOP3A)
03460 Fanconi anemia pathway
101549477 (TOP3A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sara03032
]
101549477 (TOP3A)
03400 DNA repair and recombination proteins [BR:
sara03400
]
101549477 (TOP3A)
Enzymes [BR:
sara01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
101549477 (TOP3A)
DNA replication proteins [BR:
sara03032
]
Eukaryotic type
DNA Topoisomerases
101549477 (TOP3A)
DNA repair and recombination proteins [BR:
sara03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Bloom's syndrome complex (BTR)
101549477 (TOP3A)
FA (Fanconi anemia) pathway
101549477 (TOP3A)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_GRF
Zn_ribbon_Top1
Toprim
zf-C2H2_10
Zn_ribbon_GRF_2
Zn_ribbon_recom
Motif
Other DBs
NCBI-GeneID:
101549477
NCBI-ProteinID:
XP_012789147
LinkDB
All DBs
Position
Unknown
AA seq
907 aa
AA seq
DB search
MNLTIISMARQSCNPLFLFEAEIEKYCPENFVDIKKTLERETRQCQALIIWTDCDREGEN
IGFEIIHVCKAVKPSLHVLRARFSEITLRAVQAACENLTEPDQRVSDAVEVRQELDLRIG
AAFTRFQTLRLQRIFPEVLAEQLISYGSCQFPTLGFVVERFKAIQAFVPEVFHRIKVTHD
HTDGTIEFNWKRHRLFNHTACLVLYQLCMEDPRATVVDVRSKPKSKWRPQALDTVELEKL
ASRKLRINAKETMKIAEKLYTQGYISYPRTETNIFPKDLNLAVLVEQQTPDPRWGAFAQS
ILEQGGPTPRNGNKSDQAHPPIHPTKYASNLQGDEQRLYEFIVRHFLACCSQDAQGQETT
VEIDIAQERFVAHGLMILARNYLDVYPYDHWSDKTLPVYEKDSCFQPSTVEMVDGETSPP
QLLTEADLIALMEKHGIGTDATHAEHIETIKARMYVGLTPDKRFLPGHLGMGLVEGYDSM
GYEMSKPDLRAELEADLKLICEGKKDKFVVLRQQVQKYKQVFIEAVAKAKKLDEALSQYF
GDGVEVTPQETFYPAMPEPIRKCPQCGKDMVLKTKKNGGFYVGCVGFPECRSALWFPDSV
LEVSRDESVCPVCQPAPVHRLKFKFKRGSLPPTIPLEFVGCIGGCDENLREILDLRFFRP
PLPASQPAGQSTGYLQASQALNRMDSGQCGPPQPTNTGRARASKTLAQTLTLPSESNAVT
CNCGQEALLLTVRKEGPNQGRQFFKCHSGGCSFFLWADSSQPGASGPPPSAARPPGGSLA
HLPGSGNPQRGAGGPGGNSSTSCLCSQPAVTRTVQKEGPNKGRQFHTCAKPREQQCGFFQ
WVDENVAPGTLGTLPWPGGRRKIQESDARNKRPRICSSEMGSEARRPRKCSLCHQPGHTR
PNCPQNR
NT seq
2724 nt
NT seq
+upstream
nt +downstream
nt
atgaatttgactatcatctctatggccaggcagagctgcaatcctctctttctctttgaa
gcagaaattgaaaagtattgtccagagaattttgtagacatcaagaaaactctagaacga
gagacgcggcagtgccaggccttgatcatctggactgactgtgacagagaaggggaaaat
attggttttgagattatccatgtgtgcaaggctgtgaagcccagcctgcatgtgttgaga
gctcgtttctctgagatcactctccgagctgtccaggcggcctgtgaaaacctcactgag
cctgatcagcgagtgagtgatgctgtggaagtgaggcaggagctggacctgcggatcggt
gctgccttcactcggttccagaccttgaggctgcagaggatttttcccgaggtgttggca
gagcagttgattagttacggcagctgccaattcccaactcttgggtttgtggtggagcgg
ttcaaagccattcaggcctttgtgccagaagtctttcacagaattaaagtaactcatgac
cacacagatggcactatagaattcaactggaaaagacatcgcctctttaaccatacagct
tgtcttgtcctctatcagctgtgtatggaggatcccagggcaactgtggtggacgtgaga
tccaagcccaagagcaagtggaggcctcaagctttggacactgtggaacttgagaagctg
gcttctcgaaagctgagaataaatgccaaagaaaccatgaagattgctgagaagctctac
actcaagggtacatcagttatccccgaactgaaacgaacattttccccaaagacttgaac
ctggcagtgctggtggagcagcagaccccagatccacgctggggggcctttgcccagagt
attctagagcagggtggccccaccccacgcaatgggaacaagtctgaccaagcgcaccct
cctatccaccccaccaagtatgccagcaacttgcagggtgatgaacaacgactttatgaa
tttattgtccgccatttcctggcttgctgctcccaggatgctcaggggcaggagaccacc
gtggagatagacattgcccaggaacgcttcgtagcccatggcctcatgatcctggcccga
aactatctagatgtgtatccatatgatcactggagtgacaagacgctgcctgtctatgag
aaagactcctgctttcagcccagcacggtggagatggtggatggggagaccagtcccccg
cagctgctcactgaggcggacctcattgccctcatggaaaagcatggcatcggtaccgat
gccactcatgctgagcacattgaaaccatcaaggcccggatgtacgtgggactcacccca
gacaagcgctttctcccagggcacctgggcatggggctcgtggaaggttacgattctatg
ggctatgagatgtccaagcctgacctccgagctgagctggaagctgatctgaagctcatc
tgtgaggggaagaaggacaaatttgtggttctaaggcagcaggtccagaaatacaagcag
gtttttattgaagcagtggcaaaagcgaagaaattggatgaagctctgtctcagtacttc
ggggatggggtagaagtgactccgcaagaaaccttctacccggccatgccagagcccata
aggaagtgcccacagtgtggcaaggacatggtcctcaagaccaagaagaacggcgggttc
tatgtcggctgcgtgggtttcccagaatgccgttcggccttgtggttcccagactctgtg
ctggaggttagccgggatgagagtgtgtgtccagtctgtcagccggcccctgtgcacagg
ctgaagttcaagttcaaacgcggcagccttcctccaaccatacctctggagtttgttggc
tgcattggtggatgtgacgagaacctgcgggagatcttggatctaagattttttcggccc
ccgctcccagctagccagccggctggccagtccactggctacctgcaggctagccaggcc
ctgaacaggatggacagcggccagtgcggcccaccacagcctactaacactggccgtgcc
agggcctcgaagactctggcgcagacactcacactgcccagtgagagcaacgctgtgaca
tgcaactgtggccaggaggccctgctgctcactgtgcgcaaggaggggcccaaccagggc
cgccagttctttaagtgccacagtggcggctgcagcttcttcctgtgggccgacagcagc
cagccaggagccagtgggcctcctccctccgcagcaagacccccagggggttccctggca
catttgccaggctcaggaaacccccagcggggggctggtggccccggtggtaacagcagc
acgtcctgcctgtgcagtcaaccggctgtcactcggactgtccagaaggaggggcccaat
aagggacgccagttccacacctgtgccaagccacgggagcagcagtgtggcttcttccag
tgggtggacgagaatgtagccccaggaactctgggaacgctgccctggccaggaggcaga
agaaagatccaggagtcagatgccagaaacaaaagaccgcgcatctgttcttcagaaatg
gggtccgaggccaggagacctcgaaaatgcagcctgtgccaccagcctggacacacccgt
cccaactgtcctcagaaccgatga
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