Sorex araneus (European shrew): 101549558
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Entry
101549558 CDS
T07854
Symbol
ACTN1
Name
(RefSeq) alpha-actinin-1 isoform X2
KO
K05699
actinin alpha 1/4
Organism
sara
Sorex araneus (European shrew)
Pathway
sara04510
Focal adhesion
sara04520
Adherens junction
sara04530
Tight junction
sara04670
Leukocyte transendothelial migration
sara04810
Regulation of actin cytoskeleton
sara05146
Amoebiasis
sara05203
Viral carcinogenesis
sara05322
Systemic lupus erythematosus
Brite
KEGG Orthology (KO) [BR:
sara00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
101549558 (ACTN1)
04520 Adherens junction
101549558 (ACTN1)
04530 Tight junction
101549558 (ACTN1)
09142 Cell motility
04810 Regulation of actin cytoskeleton
101549558 (ACTN1)
09150 Organismal Systems
09151 Immune system
04670 Leukocyte transendothelial migration
101549558 (ACTN1)
09160 Human Diseases
09161 Cancer: overview
05203 Viral carcinogenesis
101549558 (ACTN1)
09174 Infectious disease: parasitic
05146 Amoebiasis
101549558 (ACTN1)
09163 Immune disease
05322 Systemic lupus erythematosus
101549558 (ACTN1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sara04131
]
101549558 (ACTN1)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
sara04812
]
101549558 (ACTN1)
04147 Exosome [BR:
sara04147
]
101549558 (ACTN1)
Membrane trafficking [BR:
sara04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
101549558 (ACTN1)
Cytoskeleton proteins [BR:
sara04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
101549558 (ACTN1)
Exosome [BR:
sara04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
101549558 (ACTN1)
Exosomal proteins of colorectal cancer cells
101549558 (ACTN1)
Exosomal proteins of bladder cancer cells
101549558 (ACTN1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Spectrin
CH
EFhand_Ca_insen
EF-hand_1
EF-hand_6
EF-hand_7
EF-hand_8
EF-hand_5
XisI
Uds1
U3_assoc_6
Motif
Other DBs
NCBI-GeneID:
101549558
NCBI-ProteinID:
XP_004612387
LinkDB
All DBs
Position
Unknown
AA seq
808 aa
AA seq
DB search
MRVHKISNVNKALDFIASKGVKLVSIGAEEIVDGNVKMTLGMIWTIILRFAIQDISVEET
SAKEGLLLWCQRKTAPYKNVNIQNFHISWKDGLGFCALIHRHRPELIDYGKLRKDDPLTN
LNTAFDVAEKYLDIPKMLDAEDIVGTARPDEKAIMTYVSSFYHAFSGAQKAETAANRICK
VLAVNQENEQLMEDYEKLASDLLEWIRRTIPWLENRVPENTMHAMQQKLEDFRDYRRLHK
PPKVQEKCQLEINFNTLQTKLRLSNRPAFMPSEGRMVSDINNAWGCLEQAEKGYEEWLLN
EIRRLERLDHLAEKFRQKASIHEAWTDGKEAMLRQKDYETATLSEIKALLKKHEAFESDL
AAHQDRVEQIAAIAQELNELDYYDSPSVNARCQKICDQWDNLGALTQKRREALERTEKLL
ETIDQLYLEYAKRAAPFNNWMEGAMEDLQDTFIVHTIEEIQGLTTAHEQFKATLPDADKE
RLAILGIHNEVSKIVQTYHVNMAGTNPYTTITPQEINGKWDHVRQLVPRRDQALTEEHSR
QQHNERLRKQFGAQANVIGPWIQTKMEEIGRISIEMHGTLEDQLSHLRQYEKSIVNYKPK
IDQLEGDHQLIQEALIFDNKHTNYTMEHIRVGWEQLLTTIARTINEVENQILTRDAKGIS
QEQMNEFRASFNHFDRDHSGTLGPEEFKACLISLGYDIGNDPQGEAEFARIMSIVDPNRL
GVVTFQAFIDFMSRETADTDTADQVMASFKILAGDKNYITVDELRRELPPDQAEYCIARM
APYTGPDAVPGALDYMSFSTALYGESDL
NT seq
2427 nt
NT seq
+upstream
nt +downstream
nt
atgcgggtgcacaagatctccaacgtgaacaaggccctggacttcatcgccagcaagggc
gtcaagctggtctccatcggagccgaggaaatcgtcgatggaaatgtgaaaatgaccctg
ggcatgatctggaccattatccttcgctttgccatccaggacatctccgtggaagagacg
tctgccaaggaggggctgctgctgtggtgccagaggaagacagccccctacaagaacgtc
aacatccagaacttccacataagctggaaggacggcctcggcttctgtgccttgatccac
cgacaccggcccgagctcatagactacgggaagctgcggaaggatgacccactcacaaac
ctcaacacagcctttgacgtggccgagaagtacctggacatccccaagatgttggacgcg
gaagacatcgtcggaactgcccgcccagacgagaaggccatcatgacgtacgtgtccagc
ttctaccacgccttctctggagcccagaaggcggagactgctgccaaccgtatctgcaag
gtgctggccgtcaaccaggagaacgagcagctcatggaagactatgagaaactggccagc
gatctgctggagtggatccgccgcaccatcccctggctggagaaccgggtgcccgagaac
accatgcatgccatgcagcagaagctggaagacttccgcgactaccggcgcctgcacaag
ccgcccaaggtgcaggagaagtgccagctggagatcaacttcaacacgctgcagaccaag
ctgcgcctcagcaaccggcccgccttcatgccctccgagggcaggatggtctcggacatc
aacaacgcctggggctgcctggagcaggcggagaagggctatgaggagtggctgctgaac
gagatccggaggctggaacggctcgaccacctggcagagaagttccggcagaaagcctcc
atccacgaggcctggacggacggcaaggaagccatgctgcggcagaaggactacgagacg
gccaccctgtcggagatcaaggccctgctcaagaagcacgaggccttcgagagcgacctg
gctgcccaccaggaccgcgtggagcagatcgcggcgattgctcaggagctcaacgagctg
gactattacgactcacccagtgtcaacgcccggtgccaaaaaatctgtgaccagtgggac
aacctgggggccctcacccagaagcggagggaagccctggagcggacggagaagctgctg
gagaccatcgaccagctgtacctggagtacgccaagcgggccgcgcccttcaacaactgg
atggagggggccatggaggacctgcaagacaccttcatcgtacacaccatcgaggagatc
cagggactgaccacagcccacgagcagttcaaggccaccctccctgacgctgacaaggag
cgcctggccatcctgggcatccacaacgaggtgtccaagattgtgcagacctaccacgtc
aacatggcgggcaccaacccctacacaaccatcacacctcaggagatcaatggcaaatgg
gaccatgtgcggcagctggtgccccggagggaccaggcactgacggaggagcactcccgt
cagcagcacaacgagaggctacgcaagcagttcggggctcaggccaatgtcatcgggccc
tggatccagaccaagatggaggagatcggcaggatctccatcgaaatgcacggcacgctg
gaggaccagctcagtcacctgcggcagtacgagaagagcatcgtcaactacaagccaaag
atcgaccagctggagggcgaccaccagctcatccaggaggctctcatcttcgacaacaag
cacaccaactacaccatggagcacatccgcgtgggctgggagcagctgctcaccaccatc
gcccggaccatcaatgaggtggagaaccagatcctgacacgggatgccaagggcatcagc
caggagcagatgaatgagttccgggcctccttcaaccactttgaccgggatcactccggc
acgctgggtcccgaggagttcaaagcctgcctcatcagcttgggttatgatattggcaac
gacccccagggggaggccgaatttgcccgcatcatgagcatcgtggaccccaaccgcctg
ggggtggtgacgttccaggccttcatcgacttcatgtcccgagagacggccgacacggac
acggcggaccaggtcatggcttccttcaagatcctggctggggacaagaactacatcacg
gtggacgagctgcgccgggaactgccgcccgaccaggccgagtactgcatcgcacgaatg
gccccctacaccggccccgacgccgtgcccggtgctctggactacatgtccttctccacg
gcgctgtacggagagagtgacctctaa
DBGET
integrated database retrieval system
