Sorex araneus (European shrew): 101549898
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Entry
101549898 CDS
T07854
Symbol
CASC3
Name
(RefSeq) protein CASC3
KO
K14323
protein CASC3
Organism
sara
Sorex araneus (European shrew)
Pathway
sara03013
Nucleocytoplasmic transport
sara03015
mRNA surveillance pathway
sara03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
sara00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
101549898 (CASC3)
09122 Translation
03013 Nucleocytoplasmic transport
101549898 (CASC3)
03015 mRNA surveillance pathway
101549898 (CASC3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sara03019
]
101549898 (CASC3)
Messenger RNA biogenesis [BR:
sara03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
101549898 (CASC3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Btz
Motif
Other DBs
NCBI-GeneID:
101549898
NCBI-ProteinID:
XP_012788243
LinkDB
All DBs
Position
Unknown
AA seq
611 aa
AA seq
DB search
MGVEEKGEEVGEYSEEENSKVELKSEANDAANSSAKEEKGEEKPDTKGTVTGERQSGDGQ
ESTEPVENKVGKKGPKHLDDDEDRKNPAYIPRKGLFFEHDLRGQTQEEEVRPKGRQRKLW
KDEGRWEHDKFREDEQAPKSRQELIALYGYDIRSAHNPDDIKPRRIRKPRFGSPPQRDPN
WIGERPNKSHRHQGPGGPLPPRTFINRNAAGTGRMSTPRNYSRSGGFKEGRAGYRPLETG
GQHGGRSGETVKHDSGYRSRRLEQTPVRDPSPEADAQVLGNTEKEESASEVPAPPAEIVP
PAPDRPVEKKSYSRARRTRIKAGEAVKVAEEMPPPPEGLAPVPSVPEATPPPPPKTGSWE
PPVESTAGGLEQDMAQLNITEQNWSPGQPSFMQPRELRGMPNHIHMGAGPPPQFNRMEEM
GVQAGRAKRYSSQRQRPVPEPPAPPVHISIMEGHYYDPLQFQGPIYTHGDSPAPLPPQGM
IVQPEMHLPHPGLHPHQTPAPLPNPGLYPPPVSMSPGQPPPQQLLAPTYFSAPGVMNFGN
PSYPYAPGALPPPPPPHLYPNTQAPSQVYGGVTYYNPAQQQVQPKPSPPRRTPQPVTIKP
PPPEVVSRGSS
NT seq
1836 nt
NT seq
+upstream
nt +downstream
nt
atgggggtggaggagaaaggtgaagaggtgggggagtacagtgaagaggaaaactccaaa
gtggaactgaagtcagaagccaatgatgctgctaattcttcagcaaaggaagagaaaggc
gaagaaaagcctgacaccaaaggcactgtgactggagagagacagagtggagatggacag
gagagcacagagcctgtggagaacaaagtggggaaaaagggccccaaacatctggatgat
gatgaagatcggaagaacccagcctacatcccccggaaagggctcttctttgagcatgat
cttcgggggcaaactcaagaggaggaagtcagacctaaggggcgtcagcgaaaactgtgg
aaggatgagggtcgctgggaacatgacaagtttcgggaagatgaacaagctccaaagtct
cgacaggagctcattgctctttacggctatgacattcgttcagcccataatcctgatgac
atcaaaccccgaagaatccggaaacccaggtttggaagtcctccacagagagatcctaac
tggattggtgagcgaccaaacaagtctcatcgccaccagggccctggaggtcccctgcca
ccaaggacgtttattaacaggaatgctgcaggtactggccggatgtctactcccaggaat
tactctcgatctgggggcttcaaggaaggtcgtgcaggttacaggcctttggagactggt
gggcagcatggtggccgatctggtgagactgttaagcatgactctggttaccgatcacgg
cgcttagagcagactcctgtgagggatccatctccagaagcagatgctcaagtgcttggc
aacactgagaaggaagagtcagcctcagaggtacccgctcctcctgctgaaattgtgcca
ccagccccagacagacctgttgagaagaaatcctattcacgagcaagaagaaccagaatc
aaagctggagaggcggtcaaggttgctgaggagatgccgcctccacccgaggggttagcc
ccagtaccctctgtccctgaggccaccccaccgccacctcctaagaccggcagctgggag
cctccagtggagtccactgcaggtggacttgagcaggacatggcacagctaaacataacg
gaacagaattggagcccagggcagccttcatttatgcaaccacgtgagcttcgaggcatg
cccaaccacatacacatgggagcaggacctccgccgcagttcaaccggatggaagaaatg
ggtgtccaggctgggcgagctaaacgctattcatcccagcgccagagacctgtaccagag
ccccctgccccgcctgtgcatatcagtatcatggaaggacattactatgatccattgcag
ttccaaggaccaatctatacccatggtgacagccctgccccgctgcctcctcagggcatg
attgtgcagcctgaaatgcaccttccccacccaggtttacatccccaccagacaccggca
cctctgcccaatccgggcctctatcccccaccagtgtccatgtctccaggacagccacca
cctcagcaattgcttgctcctacttacttttctgctccaggtgtcatgaactttggtaat
cccagttacccttatgctccaggggcactgcctcccccaccaccacctcatctatatcct
aatacacaggccccatcacaggtgtatggaggagtgacctactataaccctgcccagcaa
caggtgcagccaaagccctccccaccccgcaggactccccagccagtcaccatcaagccc
ccaccccctgaggttgtaagcaggggttccagttaa
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integrated database retrieval system