KEGG   Sorex araneus (European shrew): 101549898
Entry
101549898         CDS       T07854                                 
Symbol
CASC3
Name
(RefSeq) protein CASC3
  KO
K14323  protein CASC3
Organism
sara  Sorex araneus (European shrew)
Pathway
sara03013  Nucleocytoplasmic transport
sara03015  mRNA surveillance pathway
sara03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:sara00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    101549898 (CASC3)
  09122 Translation
   03013 Nucleocytoplasmic transport
    101549898 (CASC3)
   03015 mRNA surveillance pathway
    101549898 (CASC3)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:sara03019]
    101549898 (CASC3)
Messenger RNA biogenesis [BR:sara03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     101549898 (CASC3)
SSDB
Motif
Pfam: Btz
Other DBs
NCBI-GeneID: 101549898
NCBI-ProteinID: XP_012788243
LinkDB
Position
Unknown
AA seq 611 aa
MGVEEKGEEVGEYSEEENSKVELKSEANDAANSSAKEEKGEEKPDTKGTVTGERQSGDGQ
ESTEPVENKVGKKGPKHLDDDEDRKNPAYIPRKGLFFEHDLRGQTQEEEVRPKGRQRKLW
KDEGRWEHDKFREDEQAPKSRQELIALYGYDIRSAHNPDDIKPRRIRKPRFGSPPQRDPN
WIGERPNKSHRHQGPGGPLPPRTFINRNAAGTGRMSTPRNYSRSGGFKEGRAGYRPLETG
GQHGGRSGETVKHDSGYRSRRLEQTPVRDPSPEADAQVLGNTEKEESASEVPAPPAEIVP
PAPDRPVEKKSYSRARRTRIKAGEAVKVAEEMPPPPEGLAPVPSVPEATPPPPPKTGSWE
PPVESTAGGLEQDMAQLNITEQNWSPGQPSFMQPRELRGMPNHIHMGAGPPPQFNRMEEM
GVQAGRAKRYSSQRQRPVPEPPAPPVHISIMEGHYYDPLQFQGPIYTHGDSPAPLPPQGM
IVQPEMHLPHPGLHPHQTPAPLPNPGLYPPPVSMSPGQPPPQQLLAPTYFSAPGVMNFGN
PSYPYAPGALPPPPPPHLYPNTQAPSQVYGGVTYYNPAQQQVQPKPSPPRRTPQPVTIKP
PPPEVVSRGSS
NT seq 1836 nt   +upstreamnt  +downstreamnt
atgggggtggaggagaaaggtgaagaggtgggggagtacagtgaagaggaaaactccaaa
gtggaactgaagtcagaagccaatgatgctgctaattcttcagcaaaggaagagaaaggc
gaagaaaagcctgacaccaaaggcactgtgactggagagagacagagtggagatggacag
gagagcacagagcctgtggagaacaaagtggggaaaaagggccccaaacatctggatgat
gatgaagatcggaagaacccagcctacatcccccggaaagggctcttctttgagcatgat
cttcgggggcaaactcaagaggaggaagtcagacctaaggggcgtcagcgaaaactgtgg
aaggatgagggtcgctgggaacatgacaagtttcgggaagatgaacaagctccaaagtct
cgacaggagctcattgctctttacggctatgacattcgttcagcccataatcctgatgac
atcaaaccccgaagaatccggaaacccaggtttggaagtcctccacagagagatcctaac
tggattggtgagcgaccaaacaagtctcatcgccaccagggccctggaggtcccctgcca
ccaaggacgtttattaacaggaatgctgcaggtactggccggatgtctactcccaggaat
tactctcgatctgggggcttcaaggaaggtcgtgcaggttacaggcctttggagactggt
gggcagcatggtggccgatctggtgagactgttaagcatgactctggttaccgatcacgg
cgcttagagcagactcctgtgagggatccatctccagaagcagatgctcaagtgcttggc
aacactgagaaggaagagtcagcctcagaggtacccgctcctcctgctgaaattgtgcca
ccagccccagacagacctgttgagaagaaatcctattcacgagcaagaagaaccagaatc
aaagctggagaggcggtcaaggttgctgaggagatgccgcctccacccgaggggttagcc
ccagtaccctctgtccctgaggccaccccaccgccacctcctaagaccggcagctgggag
cctccagtggagtccactgcaggtggacttgagcaggacatggcacagctaaacataacg
gaacagaattggagcccagggcagccttcatttatgcaaccacgtgagcttcgaggcatg
cccaaccacatacacatgggagcaggacctccgccgcagttcaaccggatggaagaaatg
ggtgtccaggctgggcgagctaaacgctattcatcccagcgccagagacctgtaccagag
ccccctgccccgcctgtgcatatcagtatcatggaaggacattactatgatccattgcag
ttccaaggaccaatctatacccatggtgacagccctgccccgctgcctcctcagggcatg
attgtgcagcctgaaatgcaccttccccacccaggtttacatccccaccagacaccggca
cctctgcccaatccgggcctctatcccccaccagtgtccatgtctccaggacagccacca
cctcagcaattgcttgctcctacttacttttctgctccaggtgtcatgaactttggtaat
cccagttacccttatgctccaggggcactgcctcccccaccaccacctcatctatatcct
aatacacaggccccatcacaggtgtatggaggagtgacctactataaccctgcccagcaa
caggtgcagccaaagccctccccaccccgcaggactccccagccagtcaccatcaagccc
ccaccccctgaggttgtaagcaggggttccagttaa

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