Sorex araneus (European shrew): 101550015
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Entry
101550015 CDS
T07854
Symbol
EXOSC1
Name
(RefSeq) exosome complex component CSL4
KO
K07573
exosome complex component CSL4
Organism
sara
Sorex araneus (European shrew)
Pathway
sara03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sara00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
101550015 (EXOSC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sara03019
]
101550015 (EXOSC1)
Messenger RNA biogenesis [BR:
sara03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
101550015 (EXOSC1)
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
101550015 (EXOSC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EXOSC1
ECR1_N
RRP4_S1
Motif
Other DBs
NCBI-GeneID:
101550015
NCBI-ProteinID:
XP_004616431
LinkDB
All DBs
Position
Unknown
AA seq
195 aa
AA seq
DB search
MAPPVRYCIPGERLCNLEEGTPGSGTYTRHGYIFSSLAGCLSKSSENGALPVVSVMRETE
SQLLPDVGTIVTCKVSSINTRFAKVHILYVGSTPLKNSFRGTIRKEDVRATEKDKVEIYK
SFRPGDIVLAKVISLGDAQSNYLLTTAENELGVVVAHSEAGVQMVPISWCEMQCPKTHTK
EFRKVARVQPEFLQT
NT seq
588 nt
NT seq
+upstream
nt +downstream
nt
atggcgccgcccgtgcggtactgcatccctggcgagcgtctgtgtaacctggaggaaggc
accccgggcagcggcacctacacccgccacggctacatcttctcgtcgctggccggctgc
ctgagcaagagcagcgagaacggcgcgcttcctgtcgtatctgtgatgcgagaaacagaa
tctcagttactgccggatgtgggaactatagtaacatgtaaggtctctagcattaataca
cgctttgccaaggtacacatcctgtatgtggggtccacaccactcaagaattcatttcga
ggaactatccgcaaggaagatgtccgagctactgaaaaagataaggttgaaatttataag
agtttccgcccaggcgacattgtcttggccaaagtgatctccttaggcgatgcacagtcc
aactatctcctgaccacggctgaaaacgagctcggggtcgtggtggcccacagtgaggct
ggtgtccagatggttcccatcagctggtgtgagatgcagtgccctaagacgcatactaag
gagttccggaaggtggcccgagtgcagccagagttcttgcagacctaa
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