Sorex araneus (European shrew): 101550321
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Entry
101550321 CDS
T07854
Symbol
PCDH18
Name
(RefSeq) protocadherin-18
KO
K16499
protocadherin delta 2
Organism
sara
Sorex araneus (European shrew)
Brite
KEGG Orthology (KO) [BR:
sara00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
sara04515
]
101550321 (PCDH18)
Cell adhesion molecules [BR:
sara04515
]
Cadherins
Protocadherins
101550321 (PCDH18)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
BBS1
TMEM154
Viral_Beta_CD
Syndecan
PAG
Cadherin_C_2
PepSY
Rav1p_C
Motif
Other DBs
NCBI-GeneID:
101550321
NCBI-ProteinID:
XP_004606329
LinkDB
All DBs
Position
Unknown
AA seq
1166 aa
AA seq
DB search
MPAKSQETHVATVAKTDADSEDGGDVPNGDSDPEIQQLMEEQLLSQAEQEPFEFKTLYGY
NKTERTTASVVVLITCEKAENMFMDFFANQGFLICHAAAQKRLLSFLSILLLKMPNPAAV
RFRAMQRGNSPLLVVDESSGEISIGAQIDREQLCQKNLNCSIEFDVITLPTEHLQLFHIE
VEVLDINDNAPRFSRPLIPIDISESAAVGTRIPLDSAFDPDVGDNALHTYSLAPNDFFDI
EVRTRTDGAKCAELIVVRELDRELQAAYELQLTASDLGVPQRSGSSILKISISDSNDNSP
AFEQPSYVIQLPEDSPVGTLLLDLNATDPDEGANGRIVYSFSSHVAPQIIETFRIDPERG
HLTLFKPVDYETTKSYEIDVQAQDLGPNSIPAHCKIIIKVVDVNDNKPEININLMSPEKE
EISYIFEGDPVDTFVALVRVQDKDSGLNGEIVCKLHGHGHFKLQKTYENNYLILTNATLD
REKRSEYSLTVIAEDKGTPSLSTVKHFTVQINDVNDNPPHFQRSRYELAISENNSPGAYI
TTVTATDPDLGENGQVTYTILESFILGSSITTYVTIDPSNGAIYALRIFDHEEVSQITFV
VEARDGGRPKQLVSNATVVLTIIDENDNVPVVIAPALRNNTADIAIPKGADSGFHVTRIR
AIDRDSGVNAELSCSIVAGNEENIFVIDPRSCDIHTNVSMESVPYTEWELSVVIQDKGSP
QLHTKVLLKCVTFDFTESVTSTAMTSVSPASLDVSMIIIISLGAICAVLLVIMVLFATRC
NREKKDTRSYNCRVAESTYQHHPKRPSRQIHKGDITLVPTINGTLPIRSHHRSSPSSSPT
LERGQMGSRQSHNSHQSLNSLVTISSNHVAENFSLELTHATPAVEVSQLLSMLHQGQYQP
RPSFRGNKYSRSYRYALQDMDKFSLKDSGRGDSEAGDSDYDLGRDSPIDRLLGEGFSDLF
LTDGRIPAAMRLCTEECRVLGHSDQCWMPPLPSPSSDYRSNMFIPGEEFPAQPLQQQPAP
LAGAPSGLDEDAPGAEGEKKKSFSTFGKDAPGPEPADGASLLSEMSSVFQRGSLERRKGP
LPPKAPAYPAGVAAWAASTHFQNPAGGPGAQPAAKWLPAMEEIPENYEEDDFDNVLGHLA
DGKHELMDASELVAEINKLLQDVRQS
NT seq
3501 nt
NT seq
+upstream
nt +downstream
nt
atgccagccaaatcccaggaaactcacgtggccacagtggctaagacggatgcagacagt
gaggacggaggggacgttcccaacggagattcagatcctgagattcagcagctgatggaa
gaacagctgctctcccaagccgagcaggaaccttttgaatttaaaacattgtatggatac
aacaaaacagaaagaactacagccagtgttgtagtgctgattacctgtgaaaaagctgaa
aatatgtttatggatttttttgcaaatcagggctttctaatttgtcatgctgctgctcaa
aagcgattactttcttttttatcaatattattactcaaaatgccgaaccccgccgcggtc
cgctttcgggccatgcagcggggcaactcgccgctgctggtggtggacgagagcagcggg
gagatcagcatcggcgcccagatcgaccgcgagcaactctgccagaagaacttgaactgc
tccatcgagttcgatgtcatcacgctgcccaccgagcacctgcagctgttccacatcgag
gtggaagtgctggacatcaacgacaacgcgccccgcttctcccggccgctcatccccatc
gacatctccgagagcgcggccgtgggcacccgcatcccgctcgacagcgccttcgacccg
gacgtgggcgacaacgcgctgcacacctactcgctggcgcccaacgacttcttcgacatc
gaggtgcgcacccgcacggacggcgccaagtgcgccgagctcatcgtggtccgcgagctg
gaccgcgagctgcaggccgcctacgagctgcagctcaccgcctccgacctgggggtgccc
cagcgctcgggctcctccatcctgaaaatcagcatctcggactccaatgacaacagcccg
gctttcgagcagccttcctacgtgatccaactcccggaggactccccggtgggcactttg
ctcctggacctgaacgccacggacccagatgagggcgccaacgggaggatcgtgtactcc
ttcagcagccacgtggccccccagattatagagactttccggattgatcctgagaggggc
cacttgactcttttcaagcccgtggattatgagaccaccaaatcctacgagattgatgta
caggctcaagacctgggtcccaattccatcccggcgcattgcaagatcatcatcaaggtg
gtggacgtgaacgacaacaagcccgagattaacatcaacctcatgtcccccgaaaaggaa
gagatttcttatatttttgaaggggatcctgttgatacttttgttgccttggtcagggtc
caggacaaggactctgggctgaatggagagattgtttgtaagctccacggacacggccat
ttcaaacttcagaagacttatgaaaacaattatttaatactgaccaatgctaccctggat
agggaaaagaggtctgagtacagtttgactgtcatcgcggaggacaaggggacccccagc
ctctccacggtcaaacatttcactgtgcaaatcaacgatgtgaatgacaatccgccccac
ttccagagaagccgatatgagttggcaatctcagagaacaactcgccaggggcatacatc
accacagtgacggccactgaccccgatctcggggaaaatgggcaagtcacctataccata
ctcgagagtttcatcctgggcagttccattacgacctacgtcaccattgacccatccaac
ggggccatttatgccctcagaatttttgatcatgaagaagtgagtcagatcacttttgtg
gtggaggcgagagacggaggccgccccaagcaactggtgagcaatgccacagtcgtgctc
actatcatcgatgaaaatgacaacgtccccgtggtcatcgcacctgcgctgaggaacaac
acagctgacatcgccatccccaaaggggcggacagcgggttccatgtcacccggataagg
gcgattgacagagactccggtgtgaatgcggaactcagctgttccatagtggcagggaac
gaggagaatatctttgtcatagatccgcggtcatgtgacatccataccaacgtgagcatg
gagtctgtcccctacacagagtgggagctctctgtcgtcatccaggacaaaggcagccct
cagctgcacaccaaggtccttctcaagtgcgtgacctttgacttcacagagtcagtgaca
agtacagccatgacctccgtgagcccagcctccttggacgtgtccatgatcatcattatt
tccttaggggccatctgtgccgtgctgctggttatcatggtgctgtttgccactaggtgt
aaccgagaaaagaaggacaccagatcctataactgcagggtggcggaatcaacttaccag
caccacccaaagaggccgtccaggcagattcataaaggggacatcactttggtgcctacc
atcaacgggacgctgcccatccgctcccatcacaggtcttctccgtcttcgtctcctacc
ttagaaagaggacagatgggcagccgacagagtcacaacagtcaccagtcactcaacagt
ttggtgacaatctcctcgaaccacgtggcagagaatttctcattggaactcacccatgcc
actcctgcagttgaggtctcccagcttttgtcgatgcttcaccagggtcagtatcagcca
aggccaagttttcgaggaaacaaatactccaggagctatagatatgccctccaagacatg
gacaaatttagcctgaaagacagtggccgtggtgatagcgaagcaggtgacagtgactat
gacctggggcgtgactctccaatagacaggctgctgggggaaggattcagcgacctgttt
cttacagatggaaggattccagcagccatgcgcctgtgcacggaggagtgccgggtgctg
ggccactcggaccagtgctggatgccgccgctgccgtccccgtcgtccgactaccggagc
aacatgttcatcccgggcgaagagttccctgcgcagcccctgcagcagcagccggcgccg
ctggccggggccccatcggggctggacgaggacgcgccgggcgccgagggcgagaagaag
aagagcttctccaccttcggcaaggacgcgccgggccccgagcccgccgacggcgcgtcg
ctgctgtcggagatgagcagcgtgttccagcgcggctccctggagcgccgcaagggcccg
ctgccccccaaggcgcccgcctaccccgcgggcgtggccgcctgggccgccagcacccac
ttccagaaccccgcggggggccccggcgcgcagcccgccgccaagtggctcccggccatg
gaggagatccccgagaactacgaggaggacgacttcgacaacgtgctcggccacctggcc
gacggcaagcacgaactcatggacgccagcgagctggtggccgagatcaacaagctgctg
caggacgtgcgccagagctag
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