Sorex araneus (European shrew): 101550438
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Entry
101550438 CDS
T07854
Symbol
RC3H2
Name
(RefSeq) LOW QUALITY PROTEIN: roquin-2
KO
K15690
RING finger and CCCH-type zinc finger domain-containing protein
Organism
sara
Sorex araneus (European shrew)
Brite
KEGG Orthology (KO) [BR:
sara00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sara03000
]
101550438 (RC3H2)
04121 Ubiquitin system [BR:
sara04121
]
101550438 (RC3H2)
Transcription factors [BR:
sara03000
]
Eukaryotic type
Zinc finger
Cys3His zinc factors
101550438 (RC3H2)
Ubiquitin system [BR:
sara04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
101550438 (RC3H2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Roquin_1_2-like_ROQ
ROQ_II
zf-RING_5
zf-CCCH
zf-RING_UBOX
zf-RING_2
zf-CCCH_4
Prok-RING_4
zf-C3HC4
zf-C3HC4_4
zf_CCCH_4
zf-CCCH_UNK
Xin
zf-C3HC4_2
Motif
Other DBs
NCBI-GeneID:
101550438
NCBI-ProteinID:
XP_004613399
LinkDB
All DBs
Position
Unknown
AA seq
1197 aa
AA seq
DB search
MPVQAAQWTEFLSCPICYNEFDENVHKPISLGCSHTVCKTCLNKLHRKACPFDQTAINTD
IDVLPVNFALLQLVGAQVPDHQSIKLSNLGENKHYEIAKKCVEDLALYLKPLSGGKGVAS
LNQSALSRPMQRKLVTLVNCQLVEEEGRVRAMRAARSLGERTVTELILQHQNPQQLSANL
WAAVRARGCQFLGPAMQEEALKLVLLALEDGSALSRKVLVLFVVQRLEPRFPQASKTSIG
HVVQLLYRASCFKVTKRDEDSSLMQLKEEFRSYEALRREHDAQIVHIAMEAGLRISPEQW
SSLLYGDLAHKSHMQSIIDKLQSPESFAKSVQELTIVLQRTGDPANLNRLRPHLELLANI
DPNPDAVSPTWEQLENAMVAVKTVVHGLVDFIQNYSRKGHETPQPQPNSKYKTSMCRDLR
QQGGCPRGTNCTFAHSQEELEKYRLRNKKINATVRTFPLLNKVGVNSTVTTTAGNVISVI
GSAETTGKMVPSTNGISNAESSVPQLIPRSADSSLRALETVKKVGKVGTNGQNAAGPSAE
SGTENKIGSPPKTPVSNVVATSAGPSSVGTELNSVPPKSSPFITRVPVYPQHSENIQYFQ
DPRTQIPFEVPQYPQTGYYPPPPTVPAGVAPCVPRFVRSNNVPESSLPPASMPYADHYST
FSPRDRMNSSPYQPPPPQPYGPVPPVPSGMYAPVYDSRRIWRPPLYRDDIIRSNSLPPMD
VMHSSVYQTSLRERYNSLDGYYSMACQPPSEPRTTVPLPREPCGHMKTSCEEQIRRKPEQ
WAQYHTQKAPLVSSTLPVATQSPTPPSPLFSVDFRADFSESVSGTKFEEDRLSHYSPWSC
GTIGSCINAIDSEPRDVIANSNAVLMDLDSGDVKRRVHLFETQRRTKEEDPIIPFSDGPI
ISKWGAISRSSRTGYHTTDPVQATASQGSATKPISVSDYVPYVNAVDSRWSSYGNEATSS
AHYIERDRFIVTDLSGHRKHSSTGDLLSIELQQAKSNSLLLQREANALAMQQKWNSLDEG
RHLTLNLLSKEIELRNGEMXNHSFSXLQSDYAEDTTDTKPDRDIELELSALDTDEPDGQG
EQIEEILDLQLGISSQSDQLMNGTAVENGHTVQQRQKEPLEQRRQSLGEEHVILEEQKAV
MPVTSCFSQPLPVSISNASCLPVTAVSVGNLILKTHVMSEEKNDFLKPVANGKMVNS
NT seq
3594 nt
NT seq
+upstream
nt +downstream
nt
atgcctgtgcaggcagctcagtggacagaatttctgtcctgtccaatctgctataatgaa
tttgatgagaatgtgcataaacccatcagcttaggttgttcacacactgtttgcaagacc
tgcttaaataaacttcaccggaaagcttgtcctttcgaccaaactgccatcaacacagac
atcgatgtgcttcctgtgaactttgcacttctccagttagttggagcccaggtaccagat
catcagtcgataaagttaagtaatctaggtgagaacaaacattatgagattgcaaaaaaa
tgtgttgaggatttggcactctacttaaaaccactaagtggaggtaaaggtgtagctagt
ttgaaccagagtgcactgagccgtccaatgcaaaggaaattggtgacgcttgtaaattgt
caactggtggaggaagaaggtcgtgtaagagccatgcgagcagcccgttcccttggagag
agaactgtaacggaactgatattacagcaccagaaccctcagcagttgtctgccaaccta
tgggctgctgtcagggctcgaggatgccagtttctagggccagctatgcaagaagaggcc
ttgaagttggtgttgctggcattagaagatggttctgctctctcaaggaaagttctggta
ctttttgttgtacaaagactagaaccaagatttcctcaggcatcaaaaacaagtattggt
catgttgtgcaactactgtatcgagcttcttgttttaaggtcaccaaaagggatgaagat
tcttctctgatgcagctaaaggaggaatttcgaagttatgaggcattacgcagagaacat
gatgcccagattgttcatattgctatggaagcaggactccgcatttcacctgaacagtgg
tcctcacttctttatggtgacctggcacataaatcacacatgcagtctatcattgataag
ctgcaatctccagaatcatttgcaaagagtgtccaggaattgacaattgttttgcaacgg
acaggtgacccagctaacttaaatagactgaggcctcatttagaacttcttgcaaatata
gaccctaatccagatgctgtttcaccaacttgggagcagctagagaatgcgatggtagct
gttaaaacagtggttcatggccttgtggatttcatacagaattacagtagaaaaggccat
gaaacacctcagcctcagccaaacagcaaatataaaactagcatgtgccgagatctgcga
cagcaaggagggtgtccacgaggaacaaattgtacttttgcccattctcaggaagaactt
gaaaagtatcgattaaggaacaaaaagatcaatgcgactgtaagaacatttcctcttcta
aataaagttggtgtaaacagcactgttacaaccacagccggaaatgtcatttctgtcata
ggaagtgctgaaacaacggggaaaatggttccaagtacaaacggaatttcaaatgcagaa
agcagtgttccccagctaatcccacgtagtgctgacagctcactcagagctctggagact
gtgaagaaagtggggaaggttggcactaacggccagaatgccgccgggccttctgcagag
tctgggactgaaaataaaattggttctccacccaagacgcctgtaagtaatgtagtggct
acctcagctgggccctcttctgttggaacagagctaaattctgtgcctccaaaatccagc
ccatttataactagagtaccagtatatcctcagcattctgaaaacattcagtattttcaa
gatccgaggactcagataccctttgaagtcccacagtacccacagacaggctactaccca
cctccgccaacagtaccagctggtgtggctccctgtgttcctcgctttgtgaggtccaat
aatgttccagagtcctccctcccacctgcctccatgccgtatgctgatcattacagcaca
ttttccccccgagatcgaatgaattcttctccttaccaacctcctcctcctcagccgtat
ggacccgttcctccagtcccttctgggatgtatgctccagtatatgatagcaggcgcatc
tggcgcccccctttgtaccgagatgacattatcagaagcaattctttacctccaatggat
gtgatgcactcatctgtctaccagacatctttgcgggaaagatacaactcattagatggg
tattattcaatggcttgtcagccacccagtgagccaaggacaactgtgcctttaccaagg
gaaccctgtggtcatatgaagaccagttgcgaggagcagataagaagaaagccagagcag
tgggcacagtaccacactcagaaagcacctcttgtctcttcaactctgcctgttgccaca
cagtcaccaacacctccttctcctctgttcagtgtagacttccgcgctgatttctctgaa
agtgtgagtggcacaaaatttgaagaagatcgtctttcccactattctccttggtcttgt
ggcaccataggctcctgtataaatgccatcgattcggagcccagagatgtaattgctaat
tcgaatgctgtgttgatggacctggacagtggagatgtcaagagaagagtgcacttattt
gaaactcagagaaggacgaaagaagaagacccgataattcctttcagtgatgggcctatc
atctcaaaatggggtgcaatttcccgatcatcccgtacagggtatcacactacagatcct
gtccaagccactgcttcccaaggaagtgcaactaagccaatcagtgtctcagattatgtc
ccttatgtcaatgctgttgattcgaggtggagttcttatggtaatgaggccacatcttca
gcacactatatcgaacgggacaggttcattgttacggatttatctggtcatagaaagcat
tccagtactggagaccttttgagcattgaacttcagcaggccaagagtaactctctgctt
cttcagagggaggccaacgccctggccatgcagcagaagtggaactccctggatgaaggc
cgccaccttaccttaaatcttctaagcaaggaaattgaactgagaaatggagagatgtga
aatcattctttctcttaattacagagtgattatgcagaagatacaactgatactaaacct
gatcgggacattgagttagagctgtcagcacttgatactgatgagcctgatggtcaaggg
gaacagattgaagagattctagacctgcagcttggtatcagttctcagagtgatcagttg
atgaatggaacagcagtggaaaatgggcacactgtccagcagcgccagaaggaacccctg
gagcagaggagacagagcttaggtgaagagcatgtcattctggaggagcaaaaagcggtt
atgccggtaacttcttgctttagccagcctcttccggtgtccattagcaatgcaagttgc
ctccccgtcacagctgtcagtgttggcaacctcatactgaaaactcatgttatgtctgaa
gagaaaaacgactttttaaaacctgttgcaaatgggaagatggtaaacagctga
DBGET
integrated database retrieval system
