Sorex araneus (European shrew): 101550568
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Entry
101550568 CDS
T07854
Symbol
SRRM1
Name
(RefSeq) serine/arginine repetitive matrix protein 1 isoform X1
KO
K13171
serine/arginine repetitive matrix protein 1
Organism
sara
Sorex araneus (European shrew)
Pathway
sara03013
Nucleocytoplasmic transport
sara03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
sara00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
101550568 (SRRM1)
03015 mRNA surveillance pathway
101550568 (SRRM1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sara03019
]
101550568 (SRRM1)
03041 Spliceosome [BR:
sara03041
]
101550568 (SRRM1)
Messenger RNA biogenesis [BR:
sara03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
101550568 (SRRM1)
Spliceosome [BR:
sara03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
SR-related proteins
101550568 (SRRM1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PWI
Motif
Other DBs
NCBI-GeneID:
101550568
NCBI-ProteinID:
XP_004603507
LinkDB
All DBs
Position
Unknown
AA seq
918 aa
AA seq
DB search
MDAGFFRGTSAEQDNRFSNKQKKLLKQLKFAECLEKKVDMSKVNLEVIKPWITKRVTEIL
GFEDDVVIEFIFNQLEVKNPDSKMMQINLTGFLNGKNAREFMGELWPLLLSAQENIAGIP
SAFLELKKEEIKQRQIEQEKLASMKKQDEDKDKRDKEEKESSREKRERSRSPRRRKSRSP
SPRRRSSPVRRERKRSHSRSPRHRTKSRSPSPAPEKKEKTPELPEPSVKVKEPSVQEATS
TSDILKVPKPEPVPEPKEPSPEKNSKKEKEKEKTRPRSRSRSKSRSRTRSRSPSHTRPRR
RHRSRSRSYSPRRRPSPRRRPSPRRRSPPRRMPPPPRHRRSRSPVRRRRRSSASLSGSSS
SSSSSRSRSPPKKPPKRTSSPPRKTRRLSPSTSPPRRRHRPSPPASPPPKTRHSPTPQQS
NRTRKSRVSVSPGRTSGKVTKHKGTEKRESPSPAPKPRKVELSESEEDKGGKMAAADSVQ
QRRQYRRQNQQSSSDSGSSSSSEDERPKRSHVKNGEVGRRRRHSPSRSASPSPRKRQKET
SPRMQMGKRWQSPMTKSGSRRRRSPSPPPTRRRRSPSPAPPPRRRRSPTPPPRRRTPSPP
PRRRSPSPRRYSPPIQRRYSPSPPPKRRTTSPPPPPKRRASPSPPPKRRVSHSPPKQRSS
PVTKRRSPSLSSKHRKGSSPSRSTRDARSPQPNKRHSPSPRPRAPQTSSSPPPVRRGASS
SPQRRQSPSPSTRPIRRVSRTPEPKKTKKTATPSPQSVRRVSSSRSVSGSPEPAAKKPPA
PSSPVQSQSPSTNWSPAVPVKKAKSPTPSPSPARNSDQEGGGKKKKKKKDKKHKKDKKHK
KHKKHKKEKAVAAAAAVPVTPAALAAPTTTSAQEEPEAEPEPKKEIESEAEDNLDDLEKH
LREKALRSMRKAQVSPQS
NT seq
2757 nt
NT seq
+upstream
nt +downstream
nt
atggacgcgggattcttccgcggaacaagtgcagaacaggataatcggttcagcaacaaa
cagaaaaagctactgaagcagctgaaatttgcagaatgcctagaaaaaaaggtggacatg
agcaaagtaaatttggaggttataaagccttggataacaaaacgagtaacagaaatcctt
gggtttgaagatgatgttgtgattgaatttatattcaaccagctggaagtgaagaatcca
gactccaaaatgatgcaaatcaacctgactgggtttttgaatgggaaaaatgctagagaa
tttatgggagagttgtggcccctgctcttaagtgcacaagaaaacatcgctggaatccct
tctgctttcttagaactgaagaaggaagaaataaaacagagacagattgaacaagaaaaa
ttggcatctatgaaaaagcaagatgaagacaaagataagagggataaggaagagaaagaa
agcagcagagaaaaaagagagcggtcccgaagcccaagaagacgcaaatccagatctcct
tcccctagaagacgatcttcccctgtcaggagagagagaaagcgcagtcattctcgatct
ccccgtcacagaaccaagagccggagtccttcccctgctccagaaaagaaggaaaaaact
ccagagctccctgaaccatcagtgaaagtaaaggaaccttcagtacaagaggccacttct
actagtgacatcctgaaagttcccaagcctgaacctgtaccagaacctaaagagccttct
ccagagaaaaattccaaaaaggaaaaagaaaaggagaagacgcgaccaagatctcggtca
cgatccaaatccagatctcgaacacgttctcgttctccttctcatactcgaccaagacga
cgccacagatcccgatcacgatcatactcaccaagaaggcggccaagcccaagaaggcgt
ccatctcctcgaagacggtctccaccaagacgaatgccacctccaccacggcatagaaga
agcagatctccagtgcgaagaagaaggcgttcatcagcatctttgtctgggagtagttca
tcgtcatcttcatctcgttcccggtcaccgccaaagaagcctcctaagaggacatccagc
ccccctcggaaaactcgtaggttgtctccttcaacaagtcctcctaggcgaaggcatagg
ccgtcacctccagcaagtccaccgccaaaaactcgtcattccccaacaccccagcagtca
aaccgtacaagaaaaagtcgtgtttctgtctctccagggagaacttcaggtaaagtcaca
aagcataaaggtaccgagaaaagagagtccccttcaccagcacccaagcctcgaaaagtg
gagttatcagagtcagaagaagataaaggtggcaaaatggctgcagcagattctgtacaa
caaagacgccagtaccgaagacagaaccagcagtcttcatctgattctggctcctcatct
tcttcagaagatgagcgacctaagagatcacatgtgaagaatggtgaggtaggcagacga
cggagacattccccttcccggagtgcttctccatcaccaaggaagcgccagaaagagact
tcccctcggatgcagatgggaaagcgatggcaatcgccaatgactaaaagtggtagtaga
cgtaggagaagtccctccccgcctcccaccagaagacgacggtctccttctcctgctcct
cctcctcgacgtcgcaggtctcccacaccaccaccacgacgaaggactccctctcctccc
ccgcgtcgacgctcaccttccccaagaagatattctcctccgatacagaggagatactcg
ccatctccacctccaaaaagaagaacgacttctccccctccccctcctaaacgaagggca
tctccatctccaccaccaaagcgtcgggtctcccattctcctcccaaacaaagaagctcc
cctgtcaccaagagacgttcaccttcattgtcatcaaagcataggaaaggatcttcccca
agcagatctacccgggatgcccggtcaccacaaccaaacaaacggcattcgccttcacca
cggcctcgagctcctcagacttcctctagtcctccacctgttcgaagaggagcatcatca
tcaccccaaagaaggcagtccccatctccaagtactaggcccattaggagagtctccagg
actccggaacccaaaaaaacaaaaaagactgccacgccgagccctcagtctgtaaggagg
gtttcatcttcccgttctgtctcaggatcccctgagccagcagcgaaaaagcccccagca
ccttcatctcctgtccagtctcaatcaccctctactaactggtccccggccgtaccagtc
aaaaaggctaaaagcccaacaccaagcccatcaccggcaaggaattcggaccaagaagga
ggtgggaagaaaaagaagaaaaagaaggataagaaacacaaaaaagataagaagcacaag
aagcacaaaaaacacaagaaagaaaaggctgtagctgcagctgctgcagtccctgtaacc
cctgcagcccttgctgctcccacaaccacatcagcacaggaagaacctgaagcagagcca
gagcccaagaaggagattgaaagtgaagctgaagataacctggatgacttagaaaagcac
ctgcgtgaaaaggccctgagatcaatgcggaaggctcaagtgtccccacagtcttag
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