Sorex araneus (European shrew): 101550701
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Entry
101550701 CDS
T07854
Symbol
TRMT13
Name
(RefSeq) tRNA:m(4)X modification enzyme TRM13 homolog
KO
K15446
tRNA:m4X modification enzyme [EC:
2.1.1.225
]
Organism
sara
Sorex araneus (European shrew)
Brite
KEGG Orthology (KO) [BR:
sara00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sara03016
]
101550701 (TRMT13)
Enzymes [BR:
sara01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.225 tRNA:m4X modification enzyme
101550701 (TRMT13)
Transfer RNA biogenesis [BR:
sara03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
101550701 (TRMT13)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TRM13
zf-TRM13_CCCH
zf-U11-48K
Methyltransf_32
OrgC
Motif
Other DBs
NCBI-GeneID:
101550701
NCBI-ProteinID:
XP_004614732
LinkDB
All DBs
Position
Unknown
AA seq
477 aa
AA seq
DB search
MAASEPPPRATAGRCGYFVEKKKRFCRMVVAAGKKFCGEHAGAAEEENSRKRILCPLDPK
HTVYEDQLAKHLKKCNSREKPKPDFFIQDINAGLKDETEVPENLVPISSLSEERLENLIK
KLRKVCKGLNSTLKNQILSHPALHDVLNDPKNGDSAAKHLKQQASILGNIEKLKLLGPRR
CFVEFGAGKGKLSHWVDIALKDAEKVHFILVEKVTTRFKVDGKHKKKNSVFERLQIDIQH
LCLNKIPILNKEKLPVVGIGKHLCGAATDLALRCLVETYAASYEEGNEEPLAKRIKSDKT
EKGVNPLAEEGSEKIVPEKWTPVAGIVIALCCHHRCDWRHYVGKEYFKTLGLGAVEFHYF
QRMSSWATCGMRKTPSEASNIATVRKEGRNVDGEEHDEEGCTASEDGSESTPGFLTVEEK
KKIGHLCKLLIDQGRIDYLQQKGFNPALQYYTDPVVSLENVLLTALPTHSSSPDKIV
NT seq
1434 nt
NT seq
+upstream
nt +downstream
nt
atggcagcttccgagccgccgccacgcgccaccgcgggtcgatgcgggtacttcgtggag
aagaagaagaggttttgcaggatggtggtggcggcggggaaaaagttctgcggggaacac
gccggcgccgccgaggaagaaaattctcggaaaagaatactatgtcctttagatccaaaa
cacaccgtatatgaagatcaacttgcaaagcatttgaagaaatgtaactcaagagagaag
cccaaacctgacttctttattcaagatattaatgcaggcctaaaagatgaaaccgaagtg
cctgaaaacttagttccaatttcttctctctctgaagagcgattggaaaacttaattaag
aaattgagaaaagtatgtaaaggtttgaattctacacttaaaaatcaaattctgtcccat
ccagcattgcatgatgtccttaatgaccctaagaatggtgattctgcagccaaacaccta
aaacaacaggcttctattttaggtaacattgaaaaattaaagttacttggtccaagaaga
tgctttgttgagtttggcgcaggaaagggaaaattatctcattgggttgatattgcctta
aaagatgctgaaaaagttcatttcatcctcgtggagaaggtgaccacaaggttcaaggta
gacggcaaacataaaaagaaaaattcagtgtttgaaagactgcaaattgatatccagcac
ttgtgtttgaacaagattccaatattgaacaaagaaaaactaccagtagttggaattgga
aagcatctttgtggtgcagcaacagatcttgcattacgatgtttggttgaaacctatgct
gccagttatgaggaaggaaatgaagaacctttagccaaacgcataaagagtgataaaaca
gaaaaaggagttaaccctttggccgaggaaggaagtgaaaaaattgtccccgagaagtgg
acgcctgtggctggcattgtcattgcactctgttgtcaccacaggtgtgattggagacat
tatgtgggcaaagaatatttcaagactttaggcctgggagcagtggaattccactatttc
cagcgaatgagtagctgggcaacttgtggaatgcggaagacaccttcggaagcttcaaac
atcgccacagtgagaaaagagggtcggaatgttgatggcgaagagcacgatgaggagggc
tgcacggcctctgaggatggttccgagagcacacctgggtttcttactgtagaagaaaag
aagaaaatagggcacctttgtaaattgctgattgatcaaggccgaatcgactatttgcaa
caaaagggattcaaccctgctctgcagtattacacagatcctgtggtgtctttggaaaat
gtattgttaactgctttaccaactcattcttcatctccagataaaattgtttaa
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