Sorex araneus (European shrew): 101550769
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Entry
101550769 CDS
T07854
Symbol
SMC1B
Name
(RefSeq) structural maintenance of chromosomes protein 1B isoform X1
KO
K06636
structural maintenance of chromosome 1
Organism
sara
Sorex araneus (European shrew)
Pathway
sara04110
Cell cycle
sara04114
Oocyte meiosis
Brite
KEGG Orthology (KO) [BR:
sara00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
101550769 (SMC1B)
04114 Oocyte meiosis
101550769 (SMC1B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
sara03036
]
101550769 (SMC1B)
Chromosome and associated proteins [BR:
sara03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
101550769 (SMC1B)
Meiosis-specific proteins
Cohesin complex and associated proteins
101550769 (SMC1B)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_21
AAA_15
AAA_23
AAA_29
PUMA_CC
TMF_DNA_bd
ABC_tran
Motif
Other DBs
NCBI-GeneID:
101550769
NCBI-ProteinID:
XP_004610626
LinkDB
All DBs
Position
Unknown
AA seq
1238 aa
AA seq
DB search
MGRLELLLVDNFKSWRGRQVIGPFRRFTCIIGPNGSGKSNVMDALSFVMGEKTANLRVKN
IQELIHGAHIGKPVSSSASVKIIYLEESGEEKTFTRIIRGGGSEFHFGDNPVSRSVYIAE
LEKIGIIVKARNCLVFQGTVESISMKKPKERAQFFEEISTSGELIGEYEEKKRKLQKAEE
DAQFNFNKKKNVAAERKHAKLEKEEAEHYQNLLEELKINKIQLQLFKLYHNEKKIHFLNT
ELEHVNRNLSDTKESLSHHENIVKAQKKEHGILTRQLQQTEKELKSLEALLNQKRPQYIK
AKENTSYHLKKLDVAKKSIKDSEKQCSKQEEDIRALESELADLDSAWKSFEKQLEEELLH
KGRDIELEASQLDRYKVLKEQVRKKVAIMTQQLEKLQWEQKADQERLAFEKRRCGEVKEN
LKQTKEQIEDHKKRIEKLEEYTKTCMDCLKEKKLQEETLVDEIGKTKSRISEVNEELNVI
RNDLQNAGIDNHEGRRQQKRAEILENLKRLYPDLLFGRLLDLCHPIHKKYQLAVTKLFGR
YMVAIVVATEKVARDCIRFLKEERAEPETFLALDYLDIKPINERLREIKGCKMVIDVIKT
QFPQLKKVIQFVCGNGLVCETVEEARHIAFDGPERRKTVALDGTLFLKSGVISGGSSDLK
YKARCWDEKDLKNLKDRRSQLIQELKDSMKALRKEADLKQVQTLIQGTQTRLKYSQSELE
MIKKKHLAAFHREQSQLQSELLNIESQCTMLSEGIKERQQRIEEFQEKIDKVEDDIFRRF
CEEIGVENIREFEKKHVKQQQEIDQKRLEFEKQKTRLNVQLEYSHNQLKKKTTKINTLKE
TVQKGKEEIENLKKVEENCLQIVDELMEERQKLKAQLVAQTSAIEKVQAQMEEQRKQLLA
VDRAVGKCQKEVIVVQSSLEQKRLEKHNLLLDCKVQDIEIVLLLGSLDDIIDVELGTEAE
SSQATTDIYDREDALEVDYSSLNNDWKALETDKEVEAQLQLLLQQVTAHEDILLKTSAPN
LRALENLKTVRDKFQESTDAFEASRKEARICRQEFEHVKKKRYDLFSQCFEHVSISIDQI
YKKLCRNNSAQAFLSPENPEEPYLEGISYNCVAPGKRFMPMDNLSGGEKCVAALALLFAV
HSFRPAPFFVLDEVDAALDNTNIGKVSSYIKEQTQEQFQMIVISLKEEFYSKADALIGIY
PEHGDCMFSQVLTLDLSQYPDTEGRESRESGRRQRQSR
NT seq
3717 nt
NT seq
+upstream
nt +downstream
nt
atgggccggctggagctgctgctcgtggacaacttcaagtcgtggcgcggccgccaggtc
atcgggcccttccgcaggttcacctgcatcatcggccccaacggctcgggaaaatctaat
gttatggatgcacttagttttgtaatgggagagaaaacagctaatttaagagtaaaaaat
atccaagaacttattcatggagcacatattgggaaacctgtttcttcttctgcaagtgta
aaaattatttatttggaggaaagtggagaagagaaaacatttacaagaattatccgagga
ggaggctcagaatttcattttggtgacaatcctgtgagtcgctctgtttacatagcagaa
ttggaaaagataggcataatagtcaaggctcgcaattgcctagtttttcagggaactgtt
gagtctatctcaatgaaaaaacccaaagaaagagcccagttttttgaggaaataagtaca
tcaggggaacttataggagaatatgaggaaaagaaaagaaagttacaaaaagctgaagag
gatgcacagtttaattttaataagaaaaaaaatgtagctgcagaacgcaaacatgcaaaa
ttagagaaagaagaggcagaacattatcaaaatctccttgaagaactgaaaataaacaag
atacaactgcaacttttcaaactatatcacaacgagaaaaagattcactttctgaacact
gagttagagcatgttaacaggaatttgagtgacacaaaagagtctctttctcatcatgaa
aacatagttaaagcccagaaaaaggaacatgggattctaactagacaactacagcaaaca
gaaaaagaattaaaatctcttgaagcacttttaaatcagaagaggccacagtacattaaa
gccaaagaaaatacttcttaccacctcaagaaattagatgtggctaagaaatcaataaag
gacagtgaaaaacagtgttccaaacaggaagaggacattcgcgccctggagtcggagctg
gctgatttagacagcgcctggaagagcttcgagaagcagctggaggaagaactcttacac
aaagggcgtgacattgaattagaagccagtcagctggatcgctataaggtacttaaagaa
caagttaggaagaaagtggctatcatgacccaacaactggaaaaactgcagtgggaacag
aaggcggatcaagagagactagcattcgaaaagcggagatgtggagaagtaaaggaaaac
ctaaaacaaacaaaagaacaaatagaagatcataaaaagcgaatagagaagttggaggag
tacacaaaaacatgcatggattgcttgaaagagaaaaagctgcaagaggaaaccctagtg
gatgaaattggaaaaacaaaatcaagaatatctgaagttaatgaggagttgaatgttatt
agaaatgatttacaaaatgctggaattgataatcatgagggaagacgtcagcaaaagaga
gcagaaatcctggaaaaccttaagagactgtacccagatctgttgtttggaagactgctt
gacctgtgtcaccctatccataagaagtaccagttggcagttactaaactttttggccgg
tacatggtggccattgttgtggccacggaaaaggtagcaagggattgtattcggttcctg
aaggaggagagagctgagcctgagacattccttgctctagattaccttgatatcaagccc
atcaatgaaagattaagggagattaaaggctgcaaaatggtgattgatgtcataaagact
cagtttcctcagctgaagaaagtgatccagtttgtgtgtggaaacggtcttgtctgtgag
actgtggaggaagcgaggcacatcgcgttcgatgggcctgaacgccggaagacagtagct
cttgatggtacattatttttaaaatctggtgtgatctctggagggtcaagtgacttaaaa
tataaggctagatgctgggatgagaaagacttaaagaacttgaaagacagaagaagccag
ctaatccaagagttaaaggattcgatgaaggcactccgaaaggaagcagatttaaaacaa
gtacaaactctcatccaaggaactcagacacgactcaaatactcccagagtgaactagaa
atgattaaaaagaagcaccttgccgcttttcatcgggaacaatctcagttacaaagtgaa
ctactaaatattgagtcacagtgcactatgctgagtgaaggaatcaaagagcgccagcaa
agaattgaagaatttcaagagaagattgacaaggttgaagatgatattttccgacgtttc
tgtgaagaaattggtgtggagaatattcgtgaatttgagaaaaaacacgttaaacagcaa
caggaaattgatcaaaaaagactagaatttgagaaacaaaaaactcgacttaatgttcaa
cttgagtatagtcacaatcagctgaagaagaaaacgactaagataaacacattaaaagaa
actgtccagaaaggtaaagaagagattgaaaacctgaagaaggttgaagaaaactgtctg
caaattgtggatgaactcatggaggagcgacagaagctcaaggcccagcttgtcgctcag
acttccgccatcgagaaggtgcaggcccagatggaggagcagcggaagcagctgttagcg
gttgacagggccgtggggaaatgtcaaaaagaggtcatagtcgttcagagttccctggaa
cagaaacgactggagaagcacaacttgctgcttgactgcaaggttcaagacattgagatt
gtcctcctgctggggtccctggatgacatcattgacgtggagctgggcactgaagccgag
agctcccaggccacgacagacatctacgaccgggaggatgccctggaggtggactacagc
tccctgaacaacgactggaaggctctggagaccgacaaggaggtggaggcccagctccaa
ctcctgctgcagcaggtgaccgcgcacgaggacattctgctgaagacgtccgccccgaac
ctcagggccctggagaacctcaagacagtccgggacaagttccaggagtccacagacgct
tttgaggccagcagaaaggaagccaggatatgtagacaagagtttgaacatgtgaaaaaa
aagagatacgatcttttcagccagtgttttgaacacgtctcgatctccatcgaccaaatc
tacaagaagctctgcagaaacaacagtgcccaagcatttctgagccccgagaacccggaa
gagccatacttggagggaatcagctacaactgtgtggcgcctggcaaaaggttcatgcca
atggacaacttgtcagggggagaaaagtgcgtggccgccctggcgctgctgtttgccgtg
cacagtttccggcctgctccattctttgttctagatgaggtggatgcagccctggacaat
actaacattggcaaagtatcaagctacatcaaagaacagactcaggagcagttccagatg
atcgtcatttccctgaaggaggaattctactccaaggcagatgcgctgatcggcatctat
cctgagcacggcgactgcatgttcagccaggtcctcaccctggatctctctcagtaccct
gacacagaaggccgggagagccgggagagcggcaggagacagcgccagtcccgttag
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