Sorex araneus (European shrew): 101551017
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Entry
101551017 CDS
T07854
Symbol
VPS11
Name
(RefSeq) vacuolar protein sorting-associated protein 11 homolog isoform X1
KO
K20179
vacuolar protein sorting-associated protein 11
Organism
sara
Sorex araneus (European shrew)
Pathway
sara04140
Autophagy - animal
sara04148
Efferocytosis
sara05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
sara00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
101551017 (VPS11)
04148 Efferocytosis
101551017 (VPS11)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
101551017 (VPS11)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sara04131
]
101551017 (VPS11)
Membrane trafficking [BR:
sara04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
101551017 (VPS11)
Hops complex
101551017 (VPS11)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PEP5_VPS11_N
TPR_PEP5_VPS11
VPS11_N
VPS11_C
Clathrin
zf-C3HC4_2
zf-RING_2
zf-C3HC4
zf-rbx1
TPR_GEMI5
zf-C3H2C3
zf-RING_UBOX
zf-RING_5
zf-HC5HC2H
zf-RING_11
zf-ANAPC11
zf-C3HC4_3
DUF1993
zf-RING-like
DUF5847
zf_RING_Vps8_fungal
DLP_helical
Motif
Other DBs
NCBI-GeneID:
101551017
NCBI-ProteinID:
XP_004604800
LinkDB
All DBs
Position
Unknown
AA seq
941 aa
AA seq
DB search
MAAYLQWRRFVFFDKELVKEPLGNDGAAPGAPPASGPAASKFLSLPPGITVCDSGRGSLV
FGDMEGQIWFLPRSLQLTGFQAYKLRVTHLYQLKQHNILASVGEDEEGINPLVKIWNLEK
RDGGNPLCTRIFPAIPGTEPTVVSCLTVHENLNFMAIGFTDGSVTLNKGDITRDRHSKTQ
ILHKGNYPVTGLAFRQAGKTTHLFVVTTENVQSYIVSGKDYPRVELDTHGCGLRCSALSD
PSQDLQFIVAGDECVYLYQPDERGPCFAFEGHKLIAHWFRGYLVIVSRDRKVAPKSDFTG
TDAQSSDKQILNVYDLCNKFIAYSATFEDVVDVLSEWGSLYVLTRDGRVHALQEKDTQTK
LEMLFKKNLFEMAINLAKSQHLDSDGLAQIFMQYGDHLYSKGNHDGAVQQYIRTIGKLEP
SYVIRKFLDAQRIHNLTAYLQTLHRQSLANADHTTLLLNCYTKLKDSSKLEEFIKTKSET
EVHFDVETAIKVLRQAGYYSHALYLAENHAHHEWYLKIQLEDIKNYQEALRYIGKLPFEQ
AESNMKRYGKTLMHHIPEQTTQLLKGLCTDYRPSLEGRGDREALSGRANSEEFIPIFANN
PRELKAFLEHMSEVQPDSPQGIYDTLLELRLQNWAHEKDPQVKEKLHAEAISLLKSGRFC
DVFDKALVLCQMHDFQDGVLYLYEQGKLFQQIMHYHMQHEQYRQVIAVCERHGEQDPSLW
EQALSYFARKEEDCKEYVAAVLKHIENKNLMPPLLVVQTLAHNSTATLSVIRDYLVQKLQ
KQSQQIAQDELRVRRYREETTRIRQEIQELKESPKIFQKTKCSICNSALELPSVHFLCGH
SFHQHCFESYSESDADCPTCLPENRKVMDMIRAQEQKRDLHDQFQHQLKCSNDSFSVIAD
YFGRGVFNKLTLLTDPPTARLSSSLETGLQRDLLMHSRRGT
NT seq
2826 nt
NT seq
+upstream
nt +downstream
nt
atggcggcctacctgcagtggcggcgattcgttttcttcgacaaggagctggtgaaggag
cctctgggcaatgatggggccgcgcccggagctccgcctgcctctgggcccgcagcttcc
aagttcctttccctccctcctggcatcaccgtctgcgattcaggccgagggagcctggtc
tttggagatatggaaggccagatctggttcttgccccgctccctacagctcacaggcttc
caggcctacaaactgcgggtgacacacttgtaccaactgaagcagcacaatatcctggca
tctgttggtgaagatgaagagggcatcaatccactggtgaaaatctggaacctggagaag
agagacggcggcaatccgctgtgcacgcgcatctttcctgccatcccaggaactgagcca
actgttgtgtcttgtctgactgttcatgaaaatctcaactttatggccattggttttacc
gatggcagcgtgacgttaaacaaaggagacatcacccgggaccggcatagcaagactcag
attttgcacaagggcaactaccctgtcactggcctggcctttcgccaagctggaaagacc
actcacttgtttgtggtgacaacagagaatgtccagtcctatatagtttctggcaaggac
tacccgagggtggagttggacacacacggttgtggcctgcgctgctcggccctgagcgac
ccttctcaggatctgcagttcatcgtggccggggacgaatgcgtctacttgtaccagcct
gatgaacgtgggccctgcttcgcctttgagggccacaagctcatcgcacactggttcaga
ggctacctggtcatcgtctcccgcgaccggaaggtcgcacccaagtccgacttcacaggc
acagacgcgcagagctccgacaagcagatcctcaacgtctatgacctatgcaacaagttc
atcgcctacagcgccacctttgaggatgtggtggatgtgctctccgagtggggctccctg
tacgtgctgacgcgggatgggcgggtccacgcactgcaggagaaggacacacagaccaaa
ctggagatgctatttaagaagaacctctttgagatggccattaacctagccaagagccag
cacctggacagcgacgggctggcccagatcttcatgcagtacggggaccatctctacagc
aagggcaaccacgacggggctgtccagcagtatatccgaaccatcgggaagttggagcca
tcctacgtgatccgcaagtttctggatgctcagcgcatccacaacttgaccgcctacctg
cagactctgcaccgccagtcgctggccaacgctgaccacaccaccctgctgctcaactgt
tacaccaaactcaaggacagctccaaactagaggaattcatcaagacaaagagcgagacc
gaggtccactttgatgtggagacggccatcaaggtcctccggcaggctggctactactcc
cacgccctctacctggcagagaaccacgcacaccatgagtggtacttgaagatccagctc
gaagacatcaagaattaccaggaagctcttcggtatatcggcaagctgccctttgagcag
gctgagagcaacatgaagcgctatggcaagaccctcatgcatcacatccccgagcagacg
acccagttgctgaagggactttgcactgactatcggcccagcctcgaaggccgtggtgat
cgggaggccctgagtggcagggccaactctgaggagttcatccccatctttgccaacaac
ccgcgtgagctcaaggccttcctggagcacatgagcgaggtccagcctgattcgccacag
ggcatctacgacacgctcctcgagctgcggctgcagaactgggcacatgagaaggatccc
caggtcaaagagaagcttcatgcagaggccatatccttgctcaagagtggccgcttctgc
gacgtcttcgacaaagccctggtcctgtgtcagatgcatgacttccaggatggggtcctg
tacctctatgagcagggaaaactgtttcagcaaatcatgcactaccacatgcagcacgag
cagtatcggcaggtgattgccgtgtgcgagcgccacggggagcaggatccctcgctgtgg
gagcaggcgctcagctactttgcccgcaaggaggaggactgcaaggaatacgtggctgcc
gtgctcaagcacatcgagaacaaaaacctcatgccgccccttctagtggtgcagaccctg
gctcacaactccactgccaccctgtcggtcatccgggactacctggtgcagaagctgcag
aagcagagccagcagattgcgcaggatgagctgcgggtgcggcggtaccgggaggagacc
acccgcatccgccaggagatccaggagctcaaggagagtccgaagattttccagaaaacc
aagtgtagcatctgtaacagcgccttggagctgccctccgtgcacttcctctgcggccac
tccttccaccagcactgcttcgagagctactcggagagcgatgccgactgccccacctgc
ctgccggagaaccgcaaggtcatggacatgatccgggcccaggaacagaagcgagacctc
cacgatcagttccagcatcagctcaagtgctccaatgacagcttctccgtgatcgccgac
tactttggccgaggggtcttcaacaaactgactctgctgaccgacccaccgaccgccagg
ctctccagcagcctggagacagggctgcagcgggacctgctcatgcattctcgaaggggc
acctga
DBGET
integrated database retrieval system
