Sorex araneus (European shrew): 101551212
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Entry
101551212 CDS
T07854
Symbol
CLTCL1
Name
(RefSeq) clathrin heavy chain 2 isoform X1
KO
K04646
clathrin heavy chain
Organism
sara
Sorex araneus (European shrew)
Pathway
sara04142
Lysosome
sara04144
Endocytosis
sara04721
Synaptic vesicle cycle
sara04961
Endocrine and other factor-regulated calcium reabsorption
sara05016
Huntington disease
sara05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
sara00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
101551212 (CLTCL1)
04142 Lysosome
101551212 (CLTCL1)
09150 Organismal Systems
09155 Excretory system
04961 Endocrine and other factor-regulated calcium reabsorption
101551212 (CLTCL1)
09156 Nervous system
04721 Synaptic vesicle cycle
101551212 (CLTCL1)
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
101551212 (CLTCL1)
09164 Neurodegenerative disease
05016 Huntington disease
101551212 (CLTCL1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sara04131
]
101551212 (CLTCL1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sara04147
]
101551212 (CLTCL1)
Membrane trafficking [BR:
sara04131
]
Endocytosis
Clathrin-mediated endocytosis
Clathrin
101551212 (CLTCL1)
Exosome [BR:
sara04147
]
Exosomal proteins
Proteins found in most exosomes
101551212 (CLTCL1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Clathrin
Clathrin_propel
Clathrin_H_link
Clathrin-link
TPR_COPA_B
TPR_Vps41
capSnatchArena
Gp18_dom_I
TPR_PEP5_VPS11
Motif
Other DBs
NCBI-GeneID:
101551212
NCBI-ProteinID:
XP_004607528
LinkDB
All DBs
Position
Unknown
AA seq
1640 aa
AA seq
DB search
MAQILPIRFQEHFQLQNLGINPANIGFSTLTMESDKFICVREKVGEQAQVVIIDMSDPMA
PIRRPISAESAIMNPASKVIALKAGKTLQIFNIEMKSKMKAHTMAEEVIFWKWVSVNTVA
LVTETTVYHWSMEGDSQPIKMFDRHASLAGCQMIHYRTDEYQKWLLLVGISAQQNRVVGA
MQLYSVDRKVSQPIEGHAAAFAEFKAEGNAKPATLFCFAVRNPTGGKLHIIEVGQPAAGN
QPFVKKAVDVFFPPEAQTDFPVAMQIGAKHGVIYLITKYGYLHMYDLESGACIYMNRISA
DTIFVTAPHEPTSGIIGVNKKGQVLSVCVEEDNIVNYATNVLQNPDLGLRLAIRSNLAGA
EELFVRKFGALFAQGSYAEAAKVAASAPKGILRTSDTVQKFQSIPAQPGQASPLLQYFGI
LLDQGQLNKLESLELCRPVLQQGRKQLIEKWLKEDKLECSEELGDLVKSADPTLALSVYL
RANVPSKVIQCFAETGQFQKIVLYAKKVGYAPDWIFLLRSVMRISPDQGLQFSQMLVRDE
EPLTSIDQIVDVFMENSLIQQCTSFLLDALKNNHPSEGHLQTRLLEMNLIHAPQVADAIL
GNQMFTHYDRAHIAQLCEKAGLLQRALEHYTDLYDIKRAVVHTHLLSPEWLVSFFGSLSV
EDSLACLRALLSANIRQNLQLCVQVASKYHEQLGTQSLVELFESFKSYEGLFYFLGSIVN
FSQDPDVHLKYIQAACKTGQIKEVERICRESNCYNPERVKNFLKEAKLTDQLPLIIVCDR
FDFVHDLVLYLYRNNLQKYIEIYVQKVNPSRIPAVVGGLLDVDCSEDVIKNLIMVVRGQF
STDELVAEVEKRNRLKLLLPWLESRSHEGCEEPATHNALAKIYIDSNSSPERFLKENAHY
DSRVVGRYCEKRDPHLACVAYERGQCDLELIKVCNENSLFKSEARYLVRRKDPELWAHVL
EETNPSRRQLIDQVVQTALSETQDPEEVSVTVKAFMTADLPNELIELLEKIVLDNSVFSE
HRNLQNLLILTAIKADRTRVMDYISRLDNYDAPDIASIAITSALYEEAFTIFRKFDVNAS
AIQVLIEHIGNLDRAYEFAEKCNEPAVWSQLARAQLQKDLVKEAIDSYIKADDPSSYLEV
VQAASRNSNWEDLVKFLQMARKKDRESYIETELIFALAKTNRLSELEDCINGPNNAHIQQ
VGDRCYEEGMYEAAKLLYSSVSNFARLASTLVHLGEYQAAVDSSRKANSTRTWKEVCFAC
VDGQEFRLAQLCGLHIVIHADELEELICYYQDGGYFEELISVLEAALGLERAHMGMFTEL
AILYSKFKPQKMPEHLELFWSRVNIPKVLKAAEQAHLWAELVFLYDKYEEYDNAVLTMIN
HPTDAWREGQFKDIIAKVANVELCYKALQFYLDYKPLLINDLLLVLAPRLDHTRTVGFFS
KAGQLPLVKPYLRSVQSHNNKSVNEALNHLLTEEEDFQGLRSSIDAYDNFDNIALAQQLE
KHHLIEFRRIAAYLYKGNNRWAQSVELCKKDHLYKDAMQHAAESRDAELAEKLLQWFLEE
GKRECFAASLFTCYDLLPPDVVLELAWRHNLVDLAMPYFIQVMREYLNKVDRLDASESLR
QREEHVVETAPLLFDFDGHE
NT seq
4923 nt
NT seq
+upstream
nt +downstream
nt
atggcacagatactccccatccgttttcaggagcacttccagctccaaaaccttggaatt
aatccagctaacattggattcagcacactgactatggaatcagacaagtttatatgtgtt
cgagaaaaagtcggtgagcaggcacaggtagtgattattgatatgagtgatccaatggca
ccaattagacggcccatctctgcagagagtgccatcatgaatccggcctctaaggtgata
gctctgaaagctgggaagacacttcaaatctttaatattgagatgaagagtaaaatgaag
gctcatactatggcagaagaggtgattttctggaaatgggtctctgtgaacactgtagcc
ctggttactgagaccactgtctaccactggagtatggaaggtgactcacagcctatcaag
atgtttgatagacatgccagtcttgcaggatgccagatgatccactaccggactgatgag
taccagaagtggttgctccttgttggcatttcagcacagcaaaaccgtgtggttggggca
atgcagctctattccgtggataggaaggtttcacaacctattgaaggccatgctgctgct
tttgcagagttcaaggctgaagggaatgccaagcctgccacgcttttctgctttgctgta
cgaaatcccacaggaggcaagttacacataatcgaagttggacagcctgcagcaggaaac
cagccttttgtaaagaaagctgtggatgtgtttttccctcctgaggctcagactgatttc
ccagtagctatgcagattggagcaaagcatggtgtcatttacttgatcacaaagtacggc
tatcttcatatgtatgacctagagtctggggcgtgcatttacatgaaccgtattagtgct
gatacaatctttgttactgctccacatgaacctacctctggaattattggtgtcaacaaa
aagggacaggtgctttcagtttgtgttgaggaagacaatattgtgaattatgcaaccaac
gtgcttcagaatccagaccttggtctccgtttggccattcgtagtaatctagctggggca
gaggagttatttgtgagaaaatttggtgccctgtttgcacaggggagctatgctgaggca
gccaaagtagcggcatctgcaccaaagggaatcttgcgtaccagtgacacagtccagaag
ttccagagtatacctgcccaacctgggcaggcttctcctttgctacaatactttggaatc
ctgcttgaccagggtcagctcaataaacttgaatccttagaactttgtcgtccagtcctt
cagcaaggacgcaaacaactcatagaaaagtggctgaaagaagacaagctagagtgttca
gaagaacttggagatttggtcaaaagtgctgatcctacactagctttgagtgtgtacctt
cgagcaaatgtgccaagcaaagttatacagtgttttgcagaaacaggccaattccagaaa
attgtgctctatgccaaaaaggttggctatgccccagactggatctttttgctgaggagt
gtgatgagaattagtccagatcagggcctgcagttttctcagatgctagtgcgggatgag
gagccactgactagcattgaccagattgtagatgttttcatggagaacagtttaattcag
cagtgtacttccttcttgttggatgccttgaagaataatcatccgtctgaggggcatctt
cagacacgcttactggagatgaacctgattcatgccccccaggttgcagatgccatactt
ggaaatcagatgtttactcattatgatcgggcccatatcgcccaactgtgtgaaaaggca
ggtctcctgcagcgagcattggagcactacactgatctctatgacatcaagagggctgtg
gtccacactcaccttctcagtcccgagtggctcgtcagcttctttggctctttatcagtg
gaagattctttggcatgtctgcgtgctctgctgtctgccaacattagacagaaccttcag
ttgtgtgttcaggttgcctctaagtaccatgagcagctgggtacacagtccttggtggaa
ctctttgaatccttcaagagttatgaaggcctcttctacttcttgggctcaattgtgaac
ttcagccaagatccagatgtgcacttgaagtatattcaagcagcctgtaagacaggacag
ataaaggaggtggagaggatatgccgagagagcaattgctacaatcctgaaagggtgaag
aacttcctgaaagaggccaaactcactgatcagcttcctcttatcatcgtgtgtgatagg
ttcgactttgtacatgaccttgtcttgtacttatatcgaaacaacctgcagaagtacatc
gagatttacgttcaaaaggtgaaccctagccggatcccagctgtggttggagggctgctt
gatgtggattgttctgaagacgtaattaaaaacttaatcatggtagtgagaggacagttc
tctacagatgagctggtggctgaagtagagaaaagaaacaggctaaaattgctgctcccc
tggctggagtcccggagtcatgaaggctgcgaagaacctgctacccacaatgcacttgcc
aagatttatattgacagcaacagcagccctgagcgcttcttgaaagagaatgcccactat
gacagtcgtgttgttggtcgatattgtgagaagagggacccacatctggcctgtgtggct
tatgagcgagggcagtgtgaccttgagctcatcaaggtttgcaatgagaattctttattc
aaaagtgaggctcgctacctggtgcgcaggaaggatccagagctctgggcacatgtgctt
gaggagaccaacccatccagaagacagctaattgaccaggtggtacaaacagcattatca
gaaacacaggatcctgaagaggtttcagtcactgtcaaggccttcatgacagctgacctc
cctaatgaactgattgagctactggagaagattgttctggataactctgtcttcagtgag
cacaggaatctccagaatctgctaatcctgaccgctatcaaggcagaccgcactcgagtg
atggactacatcagtcgcctggacaattatgatgccccagatattgcaagcattgccatc
accagtgcattgtatgaggaggcattcaccatcttccgcaagtttgatgtaaatgcctca
gcaatccaggtcctgattgagcacattggaaacctagatcgagcatatgagtttgcagag
aaatgcaacgaacctgccgtgtggagtcagctggcccgagcccagctccagaaagactta
gtaaaggaagccattgactcttacatcaaagctgatgacccatcctcttacctagaggtt
gttcaggcagccagcaggaatagcaattgggaagatctggttaaattcctgcagatggcc
aggaaaaaggatcgtgaatcctatatagagactgaacttatttttgccctggctaaaacc
aatcgtctctctgaactagaagattgtattaatggacccaacaatgcccacatccaacag
gttggagaccgctgttatgaggaaggaatgtatgaagctgcgaagctgctatacagcagt
gtttctaactttgcccgtctggcttctaccctggtccaccttggtgagtatcaggcagca
gtggacagcagccgcaaggcaaacagcacacggacatggaaggaggtgtgctttgcctgt
gtggatggacaggaattccgccttgcacagttgtgtggtctccacatcgtcattcatgca
gatgagctagaagagttaatttgttattaccaggatggaggctactttgaagagctgatc
tctgtgctagaagctgccttgggcctggagcgagcccatatgggcatgttcacagaacta
gctatcctgtactccaaattcaagccgcagaagatgccagagcacctggagctcttctgg
tcccgtgtcaacatcccgaaggtgttgaaagctgcagagcaggcgcacctctgggcagag
ctggtattcctttatgacaagtatgaggagtatgacaatgccgtcctcaccatgatcaat
caccctactgatgcctggagagaaggacagttcaaagacatcattgccaaggtggccaat
gtggaactctgttataaggcccttcagttctatttagactacaaacctctgctcatcaat
gacctacttctggtgcttgcaccccggctagaccacactcggactgttggcttcttttca
aaggcaggtcagttgcccctggtgaaaccttatctacgttcagtccagagccacaacaac
aagagtgtgaatgaagcactaaaccacctgctgacggaagaggaagattttcagggtttg
aggtcatctattgatgcctatgacaactttgataacatcgccctagctcagcaattggag
aagcaccacctgattgagttcaggcgcattgctgcttatctgtacaagggcaacaaccgg
tgggcccagagcgtggagctctgcaagaaggaccatctctacaaggatgccatgcagcat
gctgccgagtcacgggatgctgagttggccgagaagctgctgcagtggttcctggaggaa
ggcaaacgggagtgctttgctgcctctcttttcacctgctacgacctgcttcccccagat
gtggtgctagagctggcctggagacacaacctagtggacctggccatgccctacttcatc
caggtgatgagagagtaccttaacaaagtggacagactagatgcctcagagagcctgcgc
cagagagaggagcatgttgtggaaactgcccctctcctctttgattttgatgggcatgaa
tga
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integrated database retrieval system
