Sorex araneus (European shrew): 101551502
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Entry
101551502 CDS
T07854
Symbol
EXOSC7
Name
(RefSeq) exosome complex component RRP42
KO
K12589
exosome complex component RRP42
Organism
sara
Sorex araneus (European shrew)
Pathway
sara03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sara00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
101551502 (EXOSC7)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sara03019
]
101551502 (EXOSC7)
Messenger RNA biogenesis [BR:
sara03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
101551502 (EXOSC7)
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Cofactors
101551502 (EXOSC7)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
101551502
NCBI-ProteinID:
XP_004614655
LinkDB
All DBs
Position
Unknown
AA seq
356 aa
AA seq
DB search
MHTHTIGYQQLPAKCAVHLQRPPGGRAGASHLPPPRPPDLSSPFFQLTMKPEAVPQSQAP
AVWDAPAEWENVGLRLPKNLVFTFEDLRVDGRGCEDYRCIEVETDVVSNTSGSARVKLGH
TDILVGVKAEMGTPKLEKPNEGYLEFFVDCSANATPEFEGRGGDDLGTEIANTLYRIFNS
KNSVDRKSLCISPREHCWVLYVDVLLLECGGNLFDAISIAVKAALFNTRIPRVRVLEDEE
GSKDIELSDDPYDCIRLSVENVPCIVTLCKIGYRHVVDATLQEEACSLASLLVSVTSKGV
VTCMRKVGKGSLDPESIFEMMETGKRVGKVLHVSLQSLLHKEESLGAQRQKVGFLG
NT seq
1071 nt
NT seq
+upstream
nt +downstream
nt
atgcacacgcacacgatcggctaccagcaactcccggcaaagtgcgccgtgcacctccag
cggccgccgggcggccgggcgggcgcctcccacttgcccccgcctcgcccacccgacctc
agttcccccttcttccaactgaccatgaagccggaggcagttccccagtcccaggccccc
gctgtttgggacgcgccagcggagtgggagaacgttggtcttcgcctgcccaagaacctc
gtttttacctttgaagacctccgagtggatggccgtggctgtgaggactaccggtgcatc
gaggtggaaactgatgtggtgtccaacaccagtgggtctgccagggtcaagctgggtcat
acagacatcttggtgggcgtgaaagcagaaatggggacccccaagctggagaaaccaaac
gaaggctacctggagttctttgtcgactgttctgccaacgccactcctgaatttgaaggc
cgaggaggtgacgaccttggcacagagattgctaacaccctctaccggatattcaacagc
aagaacagtgttgaccggaaatccctctgcatcagtcctcgggagcactgctgggttctc
tatgtggacgtgctactgctggaatgtggtgggaatctgtttgacgccatctccatcgcg
gtcaaggctgctctcttcaatacaaggataccaagagtacgtgttctggaagatgaagag
gggtcaaaagacattgaattgtcagatgacccttatgattgcatccgactgagtgtggag
aatgtcccctgcattgtcaccctgtgcaagatcggctatcggcacgtggtggacgctacg
ctgcaggaggaggcctgctccttggccagcctgttggtgtccgtgaccagcaagggagtc
gtgacgtgcatgaggaaagtggggaagggcagtctggacccagagagcatcttcgagatg
atggagaccggcaagcgagtgggcaaggtgctgcacgtgtccctgcagagcctgctgcac
aaagaagagagcctgggcgcccagagacagaaagtggggttcctggggtga
DBGET
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