Sorex araneus (European shrew): 101551610 Help Entry 101551610         CDS       T07854                                  Symbol COL15A1 Name (RefSeq) collagen alpha-1(XV) chain   KO K08135   collagen type XV alpha Organism sara  Sorex araneus (European shrew) Pathway sara04974   Protein digestion and absorption Brite KEGG Orthology (KO) [BR:sara00001]  09150 Organismal Systems   09154 Digestive system    04974 Protein digestion and absorption     101551610 (COL15A1)  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    00535 Proteoglycans [BR:sara00535]     101551610 (COL15A1) Proteoglycans [BR:sara00535]  Extracellular matrix (ECM) proteoglycans   Basement membrane proteoglycans    101551610 (COL15A1) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  Endostatin Collagen Collagen_trimer Laminin_G_3 Motif Other DBs NCBI-GeneID:  101551610 NCBI-ProteinID:  XP_012790379 LinkDB All DBs Position Unknown AA seq 1282 aa AA seqDB search MAPRNMGPCWPLALVLSVSALLPAATRSRAATESIPRGPLDLTDIIGIPLPSSVSFVTGY GGFAAYSFGPNANVGRPARTLIPATFFRDFAVSAIVRPDSARGGMLFAITDALQKVLYLG LRLSGEEDGGQRVILYYTEPGSQVSQEAAAFRVPVLTRRWSRLAVVVQGDRVSLLLDCEE QGTVTFRRSARALAIEPSAGVFVGNAGATGLERFIGSMQQLIVHPDPRTPEEHCEAESSS GSGEASGFQETEGVAEILEAEMFTQAPSEELKVDPVDAPPTPTPAADDAEFSGEPMPEGT PEAPNSSVTPHSSLEQGSGEILNDTTEEDQAVDGTPIPEAGSGDGTFLPVTEEDPDIEEG SAASAGEAEEPISASGEPEAGSGSSPESGEGVLQDPKSEASVTTAVTTPQGPLSTVEVEE EEEEEEASGVPTDGLAPLVPTVASEHTGTAGPGGDEDSAAAPTESLLPPTEAGELGLAPP EGSPLPMPTVAPEGVVTQGIPEEWLPVTPEPPGTAGTTGPPGPPGPPGPPGIPGKPGADV LMGPPGSPGEDGADGEPGPPGPEGQPGPDGDSGLPGMKGEKGARGPDGSAGEKGDPGSRG LPGLPGKHGQVGTPGVTGPPGPPGPPGPGCTVGLEFEDIEGSGNLELHPEPRVCGPTASS SLKGEKGDRGPKGDQGKDGIGTRGPPGPRGLPGRIEIVPMPFVNTTHGLTNLSDIPELAG PQGPDGMPGLPGFPGPRGPKGDTGVPGFPGLKGDQGEKGEPGAILTGEVPLERLRGEKGE PGVHGSPGPMGPKGPPGHKGEFGLPGRPGRPGLNGLKGTKGDRGIMMQGPPGLPGPPGPP GPPGAVVNIKGTVFPVPARPHCKTPVIPNHSENPELITFHGVKGEKGSWGLPGSKGEKGE QGAQGPPGPPIDPVYLSHLINSLKGENGDRGIRGEKGDSHSDFFMSGPPGLPGYPGSAGQ KGETIIGPQGPPGAPGLPGPPGFGRPGVPGPPGPPGPPGPPAILGAAVALPGPPGPPGQP GLPGSRNLVTAFSSMDDMLQNAHLVIEGTFIYLKDSTEFFIRVRDGWKKLQLGELIPVPA DSLPPPALSSHPHHVQPPQLPVLSANYVRPSLHLVALNSPFSGDIRADFQCFQQARATGL LSTYRAFLSTHLQDLSTIVRKAERFSLPIVNLKGQVLFDNWDSIFTGHGGQFHPNSPIYS FDGRNVMTDPSWPQKVVWHGSTPHGVRLVDNYCEAWRTARTESTGYASPLSSGKILEQNP YSCASRLIVLCIENSFLTDARK NT seq 3849 nt NT seq  +upstreamnt  +downstreamnt atggcacccaggaacatgggaccgtgctggccactggcgctggtgctctcggtgtccgcg cttctccccgctgccacccggagccgcgccgcgacagaatccatcccccgggggccgctg gacctcacggacatcatcggcatcccgctgccctcctccgtgtccttcgtcacgggctac ggtggcttcgccgcctacagctttggcccgaatgccaacgtgggccgcccggccaggacg ctcatccctgcgaccttcttccgggactttgccgtcagcgcgatcgtgaggcccgacagt gcccgcggcggcatgctcttcgccatcaccgacgccttgcagaaggtcctctacctgggc ctgcggctgtcaggcgaggaggacggcggccagcgcgtcatcctctactacaccgagccc ggctcccaggtgtcccaggaggctgccgccttccgcgtgccagtgctcacgcggcgctgg agccgcttggccgtggtggtccagggggaccgcgtgagcctcctgctggactgcgaggag cagggcacggtcaccttccggcgctccgcccgcgccctggccatcgagcccagcgcgggc gtcttcgtgggcaacgcgggagccacggggctggagaggttcatcggctccatgcagcaa ctgatcgtgcaccctgaccccaggacgcctgaggagcactgcgaggccgagagctcctcg ggctcgggcgaggccagcgggttccaggagacggagggcgttgctgagatcttggaggca gagatgttcacacaggccccgtcggaagaactcaaagtggaccccgtggatgcccctcca actccaacacctgctgccgacgatgctgagttctctggagaacccatgcctgaggggacc ccagaagcccccaactccagtgtcaccccccacagcagcctcgaacaaggctcaggggag atcctgaatgacacgaccgaggaggaccaggctgtggacgggacccccattccagaggct ggctccggggacgggaccttcttgcctgtcactgaagaggacccagatatagaggaaggt tccgcggcgtctgcaggagaggccgaggagcccatcagcgcgtcgggggagccagaggcc ggcagcgggtcctccccggagtccggggaaggggtcctgcaggatccaaagagtgaagcc agtgtgaccacagcggtgactaccccacaagggcccctcagcaccgtggaggtggaggag gaggaggaggaggaggaggccagtggggtccccacagacggcttggcccccctcgtaccc acagtggcctctgagcatacaggcactgctggtcctggtggtgatgaagactcagcagca gcccccacagagtcactcctccccccgacagaggcaggggagctgggcctggctccccca gaggggtctccgctccccatgcctaccgtggcacctgagggggtggtcacccagggtatt cctgaggagtggcttcccgtgacccctgaaccacctggaactgctggaaccacgggtcct ccaggcccccctggcccccctggcccacccggaatacccggaaaacccggagctgatgtt ctcatgggacccccaggatctcctggggaggatggtgctgatggcgagccagggcccccg ggccccgagggacagcctggacctgatggagactccggccttccaggcatgaaaggggag aagggagcaagagggcctgacggctctgcgggagaaaagggtgaccccggcagcagaggc ttaccagggctccccgggaaacatggacaagtgggcactcctggggtcacgggcccccca gggccacccggccccccaggccctggatgcaccgtgggacttgagtttgaggacatagaa ggttctggaaacctcgagctacatcctgaacccagagtctgtggacccacggcttcgagt agcctcaaaggagagaagggagaccgtggacccaagggtgaccaagggaaggacggcatt ggcaccaggggccccccaggaccccgggggctgcccggacgcatcgagatcgtacctatg cctttcgtcaacaccacccacggactcacgaatctctcggacattccggagctggccggc cctcagggacccgatggcatgcctggactgccgggatttccgggccctagaggaccaaag ggtgacactggcgtgcctggatttccagggcttaaaggagatcagggcgagaagggcgag cctggcgccatcctgacgggggaagtcccactggagaggctgagaggggaaaagggtgaa ccaggagtgcacggatcccctggaccaatgggacccaaaggaccaccgggacacaaagga gaatttggccttcctggacgccctggtcgccccggactgaatggcctcaagggaaccaaa ggagatcgagggatcatgatgcagggccctccaggcttacctggtcccccaggcccccct ggacctcctggtgctgtggttaacatcaaaggaaccgtcttccccgtccctgcacggccg cactgcaaaacgccggtgatccccaaccattccgagaacccagagcttatcactttccac ggtgtcaaaggagaaaaaggatcctggggtcttcccggctctaaaggagaaaaaggcgaa cagggggcccaaggaccaccagggcctcccattgatccggtttatctgagtcacctcatc aacagcttgaagggggagaatggagacagaggcatccggggagagaagggggattctcat agcgacttctttatgtctgggcctccaggcttgccgggatatccgggctcggctggccag aaaggggagaccatcattgggccccaaggacccccaggggctccaggcctacctgggcca cctggctttggaagacctggtgtccctggacccccgggacccccaggaccaccaggtcct ccagccatcctgggagcagctgtggccctgcctggaccgcctggccctcctggacagccg gggctacctggatcccgaaacctggtcacagccttcagctccatggacgacatgctgcag aacgcacatttggtgatagaagggaccttcatctacttgaaggacagcacagagtttttc attcgagtccgggatggctggaaaaaattacagctgggagagctgatccccgttcccgcc gacagcctgccacccccagcactctccagccacccacatcacgttcagcctccacagctg cctgtcttaagcgccaattacgtgaggccctcgctgcacctggtggctctgaactccccc ttctctggggacattcgtgcggacttccagtgcttccagcaggccagggccacgggtctg ctgtccacctacagggcattcctatccactcacctgcaagacctctccacgatcgtgcgg aaagcagagaggttcagccttcccattgtgaatctcaagggccaagtcctttttgacaac tgggactccattttcactggccatggaggtcagttccacccaaacagtcccatatactcc tttgatggccgaaatgtaatgacggatccttcctggccccaaaaggtggtttggcacggc tccacccctcacggcgtccgtctggtggataactactgtgaagcatggcggaccgcccgc acggagagcacaggctacgcctcccccctgagctcggggaagattctggagcagaacccc tatagctgtgcgagcaggctcattgttctgtgcattgaaaatagtttcctgactgatgct cggaagtga

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