Sorex araneus (European shrew): 101551684
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Entry
101551684 CDS
T07854
Symbol
THOC5
Name
(RefSeq) THO complex subunit 5 homolog
KO
K13174
THO complex subunit 5
Organism
sara
Sorex araneus (European shrew)
Pathway
sara03013
Nucleocytoplasmic transport
sara03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
sara00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
101551684 (THOC5)
09122 Translation
03013 Nucleocytoplasmic transport
101551684 (THOC5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sara03019
]
101551684 (THOC5)
03041 Spliceosome [BR:
sara03041
]
101551684 (THOC5)
Messenger RNA biogenesis [BR:
sara03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
101551684 (THOC5)
Spliceosome [BR:
sara03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
101551684 (THOC5)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FmiP_Thoc5
Motif
Other DBs
NCBI-GeneID:
101551684
NCBI-ProteinID:
XP_004615584
LinkDB
All DBs
Position
Unknown
AA seq
683 aa
AA seq
DB search
MSSESSKKRKPKVIRSDGTPTEGKRSRSDVEQEGKYYSEEAEVDLRDPGRDYELYKYTCQ
ELQRLMAEIQDLKSRGGKDTAAEIEDRRIQSCVHFMTLKKLNRLAHIRLKKGRDQTHEAK
QKVDAYHLQLQNLLYEVMHLQKEITKCLEFKSKHEEIDLVSIEEFYMEAPPEISNAEVTM
GDPHQQTLARLDWELEQRKRLAEKYRESLSNKEKILKEIEVKKEYLSSLQPRLNSIMQAS
LPVQEYLFMPFDQAHKQYETARHLPPPLYVLFVQATAYGQACDKTLSVAIEGSVDEAKAL
FKPPEDSQDDESDSDVEEEQTTKRRRPTLGVQLDDKRKEMLKRHPLSVILDLKCKDDSVI
HLTFYYLMNLNIMTVKAKVTTASELITPLSAGDLLSPDSVLSCLYPGDHGKKTPNPANQY
QFDKVGILTLRDYVLDLGHPYLWVQKLGGLHFPKEQPQHTVIADHSLSSSHMESTMKLLR
TRVQSRMALHKQFASLEHGIVPVTSDCQYLFPVKVVSRLVKWVTLAYEDYLELHFTKDIV
EAGLAGDTNLYYMALVERGTAKLQAAVVLNPGYSSIPPIFRLCLNWKGEKNNSNDDNIRA
MESEVNVCYKELCGPRPGHQLLTNQLQRLCVLLDVYLETESQGDSVEGPEEFPQEKMCLR
LFRGPSRMKPFKYNHPQGFFSHR
NT seq
2052 nt
NT seq
+upstream
nt +downstream
nt
atgtcatcagaatcgagcaagaaacgtaagcccaaggtgatccgaagtgatggcacccca
acggaagggaagcgaagccgatccgacgtggagcaggagggcaaatactacagtgaggag
gctgaagtagatctgcgggaccctggcagagactatgagctgtacaagtacacatgccag
gagctgcagaggctcatggctgaaatccaggacctgaaaagccggggaggcaaggacacg
gcagctgagatcgaagatcggaggatccagagttgtgtgcacttcatgactctaaagaaa
cttaaccgattagcccacatcaggttgaagaaaggaagagatcaaacccatgaggccaag
cagaaggtagacgcataccacctgcagctccagaacctattgtatgaggtgatgcaccta
cagaaggagatcactaagtgtctggagtttaaatcaaagcatgaagaaattgatctggtc
agcatagaggaattttatatggaggctcctccagagattagcaatgctgaagtcaccatg
ggagaccctcaccagcaaaccctggcacgtctggactgggagttagagcagcggaaaagg
ctggcagagaagtaccgagagtctctctccaacaaggagaagatcctcaaggagattgaa
gtgaagaaggagtatctgagcagcctccagccccgcctcaacagcatcatgcaggcatcc
ctcccagtgcaggagtacttgttcatgccatttgaccaggctcacaagcagtatgaaaca
gccagacacctgccaccaccactctacgtcctctttgtccaggccactgcctacgggcag
gcttgtgataagacattgtctgtggctatcgaaggcagcgtggacgaagccaaggctctg
ttcaagcctcccgaggactcccaagatgatgaaagcgactcggatgttgaagaggaacaa
accacgaaacgccggcgacccacgctgggagttcagttggatgacaagcgcaaggagatg
ctgaagaggcacccactgtccgtcatactggacctgaagtgcaaagatgacagtgtgatt
cacctgactttctattacctcatgaacctcaacatcatgacggtaaaagccaaagtgacc
acggcgtcggagctgatcacccccttaagtgcaggagacttgctgtctcctgactcagtc
ctgagctgtctgtatcctggggaccatggaaagaaaactccaaatccagccaatcagtat
cagtttgataaagttggcatcctgactttgcgagactatgttcttgaccttggtcacccg
tacttgtgggtacagaagttgggcggcctccacttccccaaagagcagccccagcacacc
gtgatcgctgaccattccctgagctccagccatatggagagcaccatgaagctgctgagg
accagggtgcagtcccgcatggccctccacaaacagtttgcatctctggaacatggcatt
gtaccagtcaccagcgactgccagtacctcttccctgtaaaggtcgtctctcgcctggtg
aagtgggtgactcttgcttacgaagattacctggagctgcatttcaccaaagacattgtg
gaggcaggactggctggggacaccaatctctactacatggcgcttgtggagaggggcaca
gccaaactacaggctgcggtggttttgaaccctggctactcctccatcccacccatcttc
cggctttgtctgaactggaaaggggaaaaaaacaacagcaatgatgacaacattcgggcc
atggagagcgaggtgaacgtgtgctataaggagctgtgcggcccccggcccggccaccaa
ctcttgaccaaccagctgcagcggctgtgcgtgctactggacgtctacctggagaccgag
agccagggtgacagcgtggaggggcccgaggaatttccacaggagaagatgtgcctgcgg
ctgtttcggggtcctagcaggatgaagccttttaaatataaccatcctcaaggattcttc
agtcatcgctga
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integrated database retrieval system
