Sorex araneus (European shrew): 101551789
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Entry
101551789 CDS
T07854
Symbol
PRPF4
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein Prp4
KO
K12662
U4/U6 small nuclear ribonucleoprotein PRP4
Organism
sara
Sorex araneus (European shrew)
Pathway
sara03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
sara00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
101551789 (PRPF4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sara03041
]
101551789 (PRPF4)
Spliceosome [BR:
sara03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
101551789 (PRPF4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_Prp19
WD40
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EML_2
EIF3I
Beta-prop_CAF1B_HIR1
WDR55
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_WDR75_1st
ANAPC4_WD40
PRP4
WD40_MABP1-WDR62_1st
Beta-prop_EML
NBCH_WD40
WDR90_beta-prop_4th
Beta-prop_TEP1_C
Beta-prop_SCAP
Beta-prop_EIPR1
Beta-prop_DCAF4
Beta-prop_IFT122_1st
Beta-prop_Vps41
Beta-prop_IFT140_1st
Beta-prop_RIG_2nd
WD_LRWD1
WD40_like
Beta-prop_WDR19_1st
Beta-prop_WDR35_TULP_N
Beta-prop_WDR11_1st
Motif
Other DBs
NCBI-GeneID:
101551789
NCBI-ProteinID:
XP_004600368
LinkDB
All DBs
Position
Unknown
AA seq
522 aa
AA seq
DB search
MAASRTSSSTATKTKAPDDLVAPLVKKPHIYYGSLEEKERERLLKGESGILGKEGLKAGI
EAGNINITSGEVFEIEEHISERQAEVLAEFERRKRARQINVSTDDSEVKACLRALGEPIT
LFGEGPAERRERLRNILSVVGTDALKKTKKDDEKSKKSKEEYQQTWYHEGPNSLKVARLW
IANYSLPRAMKRLEEARLHKEIPETTRTSQIQELHKSLRSLNNFCSQIGDDRPISFCHFS
PNSKMLATACWSGLCKLWSVPDCNLLQTLRGHNTNVGAIVFHPNSTVSLDEKAVNLASCA
ADGSVKLWSLDSDEPVADIEGHTVRVARVMWHPSGRFLGTTCYDHSWRLWDLEAQEEILH
QEGHSMGVHDIAFHQDGSLAGTGGLDAFGRVWDLRTGRCIMFLEGHLKEIYGINFSPNGY
HIATGSGDNTCKVWDLRQRRCVYTIPAHQNLVTGVKFEPIHGNYLLTGAYDNTAKIWTHP
GWSPLKTLAGHEGKVMGLDISSDGQLIATCSYDRTFKLWMAE
NT seq
1569 nt
NT seq
+upstream
nt +downstream
nt
atggctgcctcacgcacctcctcctccacggcaaccaaaacgaaggcccccgatgacttg
gtcgcgcccctggtgaagaagccgcacatctattatggaagtctggaggagaaggagagg
gaacggctgttgaagggcgagtctgggattttggggaaagaaggacttaaagcaggaatt
gaagcaggaaatattaatatcacttctggagaagtgtttgaaattgaagagcacattagt
gaacgccaggccgaagtgttagcggagtttgagaggaggaagcgagcccggcaaatcaat
gtctccacggatgactccgaagtcaaggcttgcctccgagccctgggggagcccatcacg
ctttttggagaaggtcctgctgaacgacgagaaagattaagaaatatcctctcagtagtc
ggtaccgatgccttaaaaaagaccaagaaagatgatgagaagtctaaaaagtccaaagaa
gagtatcagcagacttggtaccacgaaggaccgaatagtctcaaggttgctagactatgg
attgctaattactcgctgcccagggcaatgaagcgcttagaggaagcccgacttcataag
gagattcccgagacgacgaggacctcccagatacaagagctgcacaaatccctccgatct
ctgaataatttctgcagtcagattggggatgaccgacctatctccttctgtcactttagt
cccaattccaaaatgttggccacggcttgctggagtgggctttgcaagctctggtcagtg
cctgactgcaaccttcttcagacgctgcgaggccataacaccaacgtcggcgccattgtg
ttccatcccaattccaccgtctccctggacgagaaggctgtcaacctggcctcctgcgct
gccgacgggtctgtgaagctctggagcctggacagtgatgaaccggtagcagacattgaa
ggccatacggtgcgtgtggcccgagtgatgtggcatccatccggacgtttcctgggcacc
acctgctatgaccactcctggcgcttgtgggacctggaggctcaggaggagattctgcat
caggagggccacagcatgggcgtgcacgacatcgccttccatcaggatggctccctggct
ggcaccgggggcctggatgcgtttggccgagtgtgggacctgcgtacgggacggtgtatc
atgttcctggaaggccacctgaaggaaatctacgggataaatttctcccccaacggctac
cacattgcaactgggagtggtgacaacacctgcaaagtatgggaccttcggcagcggcgg
tgtgtctacaccatcccggcccaccagaacttggtgaccggggtcaagtttgagcccatc
catgggaactacttgctcactggtgcctacgacaacacagccaagatctggacccacccc
ggctggtccccgctgaagaccctggctggccacgaaggcaaagtgatgggcttagacatt
tcttccgatgggcagcttatagctacatgctcctatgacaggaccttcaagctctggatg
gctgaatag
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integrated database retrieval system
