Sorex araneus (European shrew): 101551829
Help
Entry
101551829 CDS
T07854
Symbol
BRIP1
Name
(RefSeq) LOW QUALITY PROTEIN: Fanconi anemia group J protein
KO
K15362
fanconi anemia group J protein [EC:
5.6.2.3
]
Organism
sara
Sorex araneus (European shrew)
Pathway
sara03440
Homologous recombination
sara03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
sara00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
101551829 (BRIP1)
03460 Fanconi anemia pathway
101551829 (BRIP1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sara03400
]
101551829 (BRIP1)
Enzymes [BR:
sara01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
101551829 (BRIP1)
DNA repair and recombination proteins [BR:
sara03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-B complex
101551829 (BRIP1)
FA (Fanconi anemia) pathway
Downstream FA components
101551829 (BRIP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD_2
Helicase_C_2
DEAD
ResIII
ARCH_RTEL1
DUF1866
Motif
Other DBs
NCBI-GeneID:
101551829
NCBI-ProteinID:
XP_004608925
LinkDB
All DBs
Position
Unknown
AA seq
1308 aa
AA seq
DB search
MSSVWSEYTIGGVKINFPCKAYPSQLAMMNSIVRGLNSKQHCLLESPTGSGKSLALLCSA
LAWQQSLSEKPVDEGSSKKAEVPLSCCCTCHSKNFLNNDVDQGTSHHFNTPSTSTSEKND
TSTHQDSPKRTSLSAKLSAKKQASDCKDENDDFQVEKKRIRRLETTHQIRKRCSNKKEDT
KVASGKPTKPSSPLGKTNSFPPQNGVRQDKNNVPLYISYSHLLALNLYLIITYMLNNTTS
NITQPSGHCSSCYCSTKQGNSQDSSDTLKKDHGGKFKRPKIYFGTRTHKQIAQITRELRK
TAYSGVPMTILSSRDHSCIHPEVVGNFNRNEKCMELLDGKNGKSCYLYHGVHKISDQHTL
QAFHGMNKAWDIEELISLGKKLKACPYYTARELIETADIIFCPYNYLLDAQIRETMDINL
KEQVVILDEAHNIEDCARESASFTITEVQLLFARDELDSMVNNNIRKKDHGPLRAVCYSL
INWLETNSEHLVERDYESSCKIWSGSEMLLNLHKMGITTATFPILQGHFSAVLQKEEKGF
SIYGKEESREIPVISASTQIMLKGLFMVLDYLFRQNSRFADDYKVAIQQTYSWTNKSDFS
DKNGLIVVPKNKKRSRQKTAVHVLNFWCLNPAVAFSDINGKVRTIVLTSGTLSPMKSFSS
ELGVTFTIQLEANHVINNSQVWVGTIGTGPKGRNLCATFQHTETFEFQDEVGALLLSVCQ
TVSQGILCFLPSYKLLEKLKERWLYTGLWSKLELVKTVIVEPQGGEKIDFDELLQVYYDA
IKFKGEKDGALLVAVCRGKVSEGLDFSDDNARAVITIGIPFPNVKDLQVELKRQYNDQHS
KLRGLLPGRQWYEIQAYRALNQALGRCIRHKNDWGALILVDDRFRSNPNRYISGLSKWVR
QQIHHHSSFESALESLAEFSKKHQKIINMSKEDRTLIQDNESTFETACVKDNTSTCLLEA
ESHLSSENPKENETKMCVQELHCPNTRSPPLPSDICSREEKNDPELVEESAQPMKAKKIG
ISRSTSPTFDKESKKFRWSNFNSSEPYFTGKILTTTPQVRSSEDCASISSPFKTEKECKT
ELLVTDKCKSAALTENTSFGPCSQLENIIPSIKTDTTLPKKNYSGQLLCNEGALNSDIEL
PLLREEDNLPTSSRSCDSEAEDESIYFTPELYDSVATNEEKNELLGPDSVDKLDNNSKCI
LAEDLFEIRSXERREFREFKAEDCINIISNSVVHSNESKINDIVDNIKKKPHKLMELRKP
GRAYPLILGTTPRLTLKGHSQGITQVLGIEPGVVMWACPLGLRVILSQ
NT seq
3927 nt
NT seq
+upstream
nt +downstream
nt
atgtcttcagtgtggtctgaatatacaattggtggggtgaagattaattttccttgtaaa
gcatatccatcacagcttgctatgatgaattctattgtcagaggattaaacagtaaacag
cattgtttgttggagagccccacaggaagtggtaaaagcttagctttactttgttctgct
ttagcatggcaacagtctcttagtgagaaaccagtggatgaaggctcaagtaaaaaagct
gaggtaccattgtcatgttgttgtacatgccattcaaagaattttttaaacaatgatgtg
gatcaaggaacttcacatcatttcaacacccctagtacatcaacatctgaaaaaaatgac
acatcaactcatcaagactcacctaaaagaacttcactgtctgcgaagctgtctgccaag
aagcaggcttctgattgtaaggatgaaaatgatgattttcaagtagagaagaaaagaatt
cgacgcttagaaaccacacatcagattagaaagcgttgctctaataaaaaagaggataca
aaagttgcttcaggaaagcccacgaaacccagctctccattaggaaagacgaactccttt
cctccacagaatggtgtccgtcaagataagaataatgttcccctttatatttcttatagc
caccttctggcactcaacctgtacttaataattacctatatgttaaataacactaccagt
aatattactcaaccttctggtcactgttctagctgctattgttctactaaacaaggaaac
agtcaagattcttcagatacccttaagaaggatcatggggggaaattcaagagacccaaa
atatattttgggactcgcacacacaagcagattgctcagattactagggagctccggaag
accgcatactcaggggtccccatgactattctttccagcagagatcattcctgtattcat
cctgaagtagtaggtaactttaacagaaatgaaaagtgtatggagttgctggatggaaaa
aatggcaaatcctgctatctttatcatggtgttcataaaattagtgatcaacacacattg
caggctttccatgggatgaacaaggcatgggatatagaagaactcatcagcttggggaaa
aaattaaaagcatgcccatattacacagcacgagaactaatagaaactgctgatataatt
ttttgtccctacaactatcttcttgatgcacaaataagggaaactatggatatcaatctg
aaagaacaggttgtcattttagatgaagcccataacattgaagattgtgctcgggaatca
gcaagtttcactataacagaagttcagcttctgtttgctcgagatgaactggacagtatg
gtcaacaataatataaggaaaaaagaccatggacccttacgagctgtgtgctatagcctc
attaattggttagaaacaaattctgaacatcttgtggaaagggattatgagtcgtcctgt
aaaatatggagtggaagtgaaatgctcttaaatttacacaaaatgggcatcaccactgct
acctttcccattttgcagggacatttttctgctgtacttcaaaaagaggaaaaaggcttt
tcaatttatggtaaagaagagtcaagagaaatccctgttattagcgcttctactcagata
atgctcaaaggactctttatggtgcttgattatctctttaggcaaaatagtagatttgca
gatgattataaagtcgctattcaacaaacttactcttggacaaataagagcgatttctca
gataaaaatggactcattgttgtaccaaaaaataagaaacgttcacgacagaaaactgca
gttcatgtgcttaacttctggtgcttaaatccagctgtggccttttcagatattaatgga
aaagttcggacaattgttttgacatctggcacattatcaccaatgaaatccttctcttca
gaacttggtgttacatttactatccaactggaagccaatcatgtcattaataactcacag
gtttgggttggcacgattgggacaggccccaaaggtcggaatctctgtgctaccttccag
cacacggaaacatttgagttccaagatgaagtgggagcacttttgttatctgtttgccag
actgtgagccaaggaattttgtgtttcttgccatcttacaagctgttagaaaagttaaaa
gaacgatggctctacaccggtttatggagtaaactggagttggtgaagacagtcattgta
gaaccacagggaggagagaaaatagattttgatgaattactgcaggtatactatgatgca
atcaagttcaaaggagagaaagatggagccctcttggtagcagtttgtcgtggtaaagtg
agtgagggtctggatttctcagacgacaatgcccgtgctgtcataaccataggaattcct
tttccaaatgtgaaagatctacaggttgaactgaagcgacaatataatgaccaacactca
aaattaagaggtcttttacctggccgtcagtggtatgaaattcaagcgtacagggccttg
aaccaggccttgggtagatgtattcggcacaaaaatgactggggagcccttattctagtg
gatgaccgcttcaggagtaacccaaaccgctatatatctgggctttctaaatgggtaagg
cagcagattcatcaccattcatcctttgaaagtgcactggagtccttggctgaattttcc
aaaaagcaccaaaagatcattaatatgtccaaggaagacagaactttaatacaggataat
gaatctacttttgaaacagcctgtgtgaaggacaatacttcaacttgcttattagaagcc
gaaagtcatctgtcatcagaaaaccctaaggaaaatgaaacaaaaatgtgtgtacaagaa
ttacattgtcctaacacaagaagcccacctctaccaagtgacatctgttcaagagaggag
aaaaatgatccggaattagtggaagagtctgcccaaccaatgaaagcaaaaaaaattggg
atttctcgatccacaagcccaacctttgacaaagaatcaaaaaagtttagatggtctaac
tttaattcttcagaaccatatttcactggtaaaattctgactaccacacctcaggtcaga
tcatcagaggattgtgcctctatttcttccccttttaaaacagaaaaggaatgtaaaact
gagttattggtcactgataaatgcaaatctgcagctctgacagaaaacacatccttcgga
ccatgctctcaattagaaaacattattccatcaataaagactgatactactcttcctaaa
aagaattattctggtcagctgctctgcaatgaaggagccctgaattccgacattgaattg
cctctactaagggaagaagacaatcttcctacttccagcagatcttgtgactctgaagca
gaagatgaatctatctattttacacctgaactttatgattctgtagctacaaatgaagaa
aaaaatgaactcctcggacctgacagtgttgataaattggataataattcaaaatgcatt
ttggctgaagatctctttgaaattagaagtnaggaaaggagggaattcagagaatttaaa
gctgaggactgcataaacataatatccaatagcgtggtgcatagtaatgaaagtaaaatc
aatgacattgttgataatataaaaaaaaaaccacataaattaatggaactaagaaaaccc
gggagagcatatccattaatcctaggaactactcccagattaacgctgaagggccacagt
caggggatcacgcaggtcctgggaattgaacctggtgtggtcatgtgggcatgtcctcta
ggccttagagtcatcctgagccaatag
DBGET
integrated database retrieval system
