Sorex araneus (European shrew): 101551980
Help
Entry
101551980 CDS
T07854
Symbol
COL4A2
Name
(RefSeq) collagen alpha-2(IV) chain
KO
K06237
collagen type IV alpha
Organism
sara
Sorex araneus (European shrew)
Pathway
sara04151
PI3K-Akt signaling pathway
sara04382
Cornified envelope formation
sara04510
Focal adhesion
sara04512
ECM-receptor interaction
sara04518
Integrin signaling
sara04820
Cytoskeleton in muscle cells
sara04926
Relaxin signaling pathway
sara04933
AGE-RAGE signaling pathway in diabetic complications
sara04974
Protein digestion and absorption
sara05146
Amoebiasis
sara05165
Human papillomavirus infection
sara05200
Pathways in cancer
sara05222
Small cell lung cancer
Brite
KEGG Orthology (KO) [BR:
sara00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
101551980 (COL4A2)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
101551980 (COL4A2)
04518 Integrin signaling
101551980 (COL4A2)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
101551980 (COL4A2)
09142 Cell motility
04820 Cytoskeleton in muscle cells
101551980 (COL4A2)
09150 Organismal Systems
09152 Endocrine system
04926 Relaxin signaling pathway
101551980 (COL4A2)
09154 Digestive system
04974 Protein digestion and absorption
101551980 (COL4A2)
09158 Development and regeneration
04382 Cornified envelope formation
101551980 (COL4A2)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
101551980 (COL4A2)
09162 Cancer: specific types
05222 Small cell lung cancer
101551980 (COL4A2)
09172 Infectious disease: viral
05165 Human papillomavirus infection
101551980 (COL4A2)
09174 Infectious disease: parasitic
05146 Amoebiasis
101551980 (COL4A2)
09167 Endocrine and metabolic disease
04933 AGE-RAGE signaling pathway in diabetic complications
101551980 (COL4A2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sara04147
]
101551980 (COL4A2)
00536 Glycosaminoglycan binding proteins [BR:
sara00536
]
101551980 (COL4A2)
Exosome [BR:
sara04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
101551980 (COL4A2)
Glycosaminoglycan binding proteins [BR:
sara00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
101551980 (COL4A2)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
101551980
NCBI-ProteinID:
XP_004621532
LinkDB
All DBs
Position
Unknown
AA seq
1828 aa
AA seq
DB search
MEKPLAESSRQGRLSGTRSSVGNNVSHSLQPVPASTPRSAPAVSRLEERRRGVGKVTDRW
PLSAPGPAGPGLSGLLAGVPVSSGRRAGWEPRGDGTEGHAHGHMPGRPPSPYDFLRFCGG
CAEALILPALIKARVHAAESGPDPGPATPSGGVKKYDVPCGGRDCSGGCQCYPEKGGRGQ
PGPVGTQGYSGPPGLQGFPGLQGHKGEKGERGRPGVTGPKGEVGVRGVSGFPGADGIPGH
PGQGGPRGPPGHDGCNGTRGDAGPQGPSGTGGIPGSPGPQGPKGQKGEPYALSPEERGKY
RGEPGEPGLVGFQGPPGRPGPMGPMGPVGAQGRPGPPGPPGPKGQQGNRGLGFYGEKGEK
GEMGLPGPNGVPSEGQPVTGPSKDTLHLEHYKGIKGSQGDPGRQGYGMKGEDGIVGFPGE
RGLAGYPGEKGDLGLRGTRGPDGYQGPDGPPGPKGEPGVQGPPGPPGYSPHPSLAKGIRG
EPGFPGPHGEPGSRGQPGDPGPPGLPGAPMGVEDEKRGFPGEMGPKGFSGDPGIPARYPG
PPGTDGRPGAQGLPGAPGAPGPDGFLFGLKGTEGHEGYPGPSGFPGARGQKGWKGEAGDC
RCGDEFTRGPPGLPGYKGFPGTNGEPGRKGDAGEPGAHGIPGFPGFKGAPGQTGPPGPKG
AKGDSRTITTKGERGQPGVPGVPGLKGADGFPGREGLGGFPGLPGPPGDGIQGPPGDAGY
EGLPGAKGLPGEMGPPGLGLPGPKGGRGFPGEAGAPGLPGFPGPPGPPGSPGQIDCDVDG
VKRPIGGQDQAPLRPGCVGGPMGSAGPPGPPGPPGIKGLPGAPGLPGADGTPGLKGLPGD
PGREGFPGPPGFVGPRGSKGAMGRPGPDGLPGPSGVPGPAGPPGDRGLPGEALGAQPGPR
GDAGLPGHPGLKGVPGERGPPGFTGSPGMPGMPGRKGHFGLPGPSGQPGLPGPPGQHGFP
GPPGREGPLGLPGAPGFGGLPGDRGDPGDSGVPGPVGMKGVPGDRGDPGALGEQGQPGSP
GFKGMAGMPGTPGPKGDRGSPGMDGFQGMPGFQGRPGSPGSKGEAGFFGVPGLKGLAGEP
GVKGNRGDPGPPGPPPVIVPGMKSIKGEKGDEGPMGLKGFLGLKGGVGMPGVPGLSGIPG
MPGKPGYIKGVKGDIGVPGLPGSPGFPGVPGPPGIAGFPGFIGSRGEMGAPGREGLFGEA
GPTGDFGDIGDTINLPGAPGLKGERGGTGIPGRKGFFGEKGAIGDIGFPGITGMTGAQGP
PGLHGQTGFPGLTGLTGLQGEPGRVGVPGDKGDFGWPGAPGLPGFPGARGIGGLNGLPGT
KGSPGSPGPDGHGDPGFPGPVGERGEPGEPNTFPGPPGAPGQKGERGVPGERGPAGSPGL
RGFPGVTPPSNISGSPGDVGVPGIFGMQGYQGPPGPPGPAARPGSKGEDGPPGPPGSPGS
KGWGGDPGPQGRPGVFGLPGEKGPRGEPGFMGNTGATGSVGDRGPKGPKGDRGRPGPPGS
MGSPGIAGVPQRIATQPGPMGPQGRRGPPGAQGEAGPQGPPGDPGFRGAPGKAGVQGRGG
VSAMPGFRGDPGPMGNQGPIGQEGEPGRPGSPGLPGLPGRSVSIGYLLVKHSQTEQEPMC
PAGMTKLWGGYSLLYFEGQEKAHNQDLGLAGSCLARFSTMPFLYCNPGDVCYYASRNDKS
YWLSTTAPLPMMPVAEEEIKPYISRCSVCEAPAVAIAVHSQDVSIPHCPAGWRSLWIGYS
FLMHTAAGDEGGGQSLVSPGSCLEDFRATPFIECNGGRGTCHYYANKYSFWLTTIAEQSF
QASPSPDTLKAGLIRTHISRCQVCMKNL
NT seq
5487 nt
NT seq
+upstream
nt +downstream
nt
atggaaaagcctctggccgagtcctcccggcagggcagactctcgggcactcgctcgtct
gtgggcaacaatgtcagccattcactgcagcccgtcccggcgtccacgccacgctccgcg
ccagccgtgagcagactcgaggagcggcggcgcggagtgggcaaggtgacggacaggtgg
ccgctgtccgccccgggaccagcaggcccaggtctcagcggcctcctggctggggtgccg
gtcagcagtgggcgccgggcgggctgggagcctcgtggtgacggcaccgagggccacgct
cacggccacatgcctggtcggccaccctcgccctacgacttcctgcgtttctgcggcggg
tgcgcggaagcccttatacttcctgctctgataaaggcccgtgtgcacgcggccgagagc
ggcccagaccccggcccggccacaccctctgggggtgtgaagaagtacgacgtgccgtgt
ggcggcagagactgcagtggcggctgccagtgctaccccgagaaaggagggcggggccag
ccgggaccggtgggcacccagggctacagcgggccgccgggcctgcagggcttccccggc
ctgcagggccacaagggagagaagggcgagcgcggccggcccggcgtcacgggacccaaa
ggcgaagtgggggtcagaggcgtgtccggcttcccgggggccgacgggattcccgggcac
ccgggccaaggcggtccccgagggccgcccggccacgacggctgcaacggcacccgtgga
gacgccggcccgcaggggccttccggcaccgggggcatccccggctctcccgggccccaa
gggccgaaagggcagaagggcgagccctacgcactgtcccccgaggagcgcggcaagtac
aggggggagcccggcgagccgggactggtcggcttccagggtccccccggccgcccgggg
cccatggggccgatggggccagtcggcgctcaagggagaccgggcccgccgggacccccc
ggacccaaagggcagcagggcaaccgcggactgggcttctacggagagaagggcgagaag
ggcgagatgggcctgccggggcccaacggggttccgtccgaggggcagcccgtcacgggc
cccagcaaggacacgctgcacctggagcactacaagggcatcaaggggagccagggggac
cccgggcggcagggctacggcatgaagggggaagacggcatcgtgggcttcccgggagag
cggggcctggccggctaccccggagagaagggagacctgggcctgaggggaaccagaggt
cctgatggctaccaaggccccgacggcccgcccggacccaagggagaacccggcgtccag
ggcccccccggccccccaggctactccccgcacccgtccctcgccaaaggcatcagagga
gaacccgggttcccggggccccacggggagccgggcagccgtgggcagccaggagacccc
gggcccccaggcctgccgggcgcgcccatgggagtggaagacgagaagaggggcttcccc
ggagagatggggcccaaaggcttcagcggagaccccggcatccccgcgcggtaccccgga
cccccggggacggatggcaggccgggagcacaaggcctccccggggcccctggggcccct
ggacccgacggcttcctcttcgggctgaaagggacggagggacacgaaggctaccccggc
ccgtcgggcttccccggcgcccgaggacagaagggatggaaaggcgaagccggggactgc
aggtgcggtgacgagttcacgcggggacccccgggcctgccggggtacaaaggcttcccc
ggcaccaacggggagcccggccgcaaaggcgacgcaggcgaacccggtgcccacggcatc
cccggcttcccgggcttcaagggagcccctggccagaccggcccccccgggcccaaaggc
gcgaagggggattccaggaccatcaccaccaaaggcgagcggggacagcccggcgtgccc
ggcgtgcctggcctgaagggcgcggatggcttccccggccgcgagggactcggcggattc
cccggcctgccgggccccccgggtgacggcatccagggcccccctggagacgcgggctac
gagggccttcccggcgccaagggccttcccggagagatgggccccccgggcctgggcctc
ccgggccccaagggcggacgcggcttccccggagaggcgggggctcccggcctgccgggc
ttccctgggccccccgggcccccgggctcgccaggacagatcgactgtgacgttgacggc
gtgaagagacccatcggggggcaggaccaggcgcccctgcggccaggctgtgtcggagga
cccatgggatccgcgggccccccgggcccccccggccccccaggaatcaagggcctgccc
ggggcaccaggcttgccaggggccgacgggaccccaggactcaagggccttccaggagat
cccggccgtgaagggttcccgggacccccagggttcgtggggcctcgaggatccaaagga
gccatgggccggcccggacctgacggcctcccagggccaagcggagtgccggggccggcc
ggaccccccggggacaggggcctgccaggagaagccctgggtgcccagcccgggccccgg
ggagacgctggcctgccgggacaccccgggctgaaaggcgtccccggggagagaggccct
ccgggcttcacggggagcccgggcatgcctggaatgccggggcgcaaaggccactttggc
ctgccgggaccctcaggccagcccgggctgccaggaccaccaggccagcacggcttcccc
ggaccccccggccgagaggggcccttggggctgccgggcgccccgggattcggaggcctg
cctggagaccgcggagaccccggggactcgggcgtgccaggccccgtgggcatgaagggt
gtccccggcgacagaggcgacccgggcgctctgggggagcaaggccagccggggtcgcct
ggcttcaaaggcatggcagggatgccgggcacccccgggccgaaaggggaccgggggtca
ccgggcatggacggcttccagggcatgcccggcttccagggccggcccggctctccaggc
agcaagggagaagccggcttcttcggggtgccggggctgaagggcctggccggggagccc
ggggtcaaaggcaacagaggggaccctggacccccgggaccaccacccgtcatcgtgccg
gggatgaagagcatcaagggcgagaaaggcgacgagggccccatggggctgaagggcttc
ctgggcctgaaaggcggcgtcgggatgccgggcgtcccggggctgtcgggtatccctggc
atgccgggaaagcccggctacatcaagggcgtcaagggggacatcggcgtgcccggcctg
cccggctctcctggcttccccggcgtgcccgggccccccgggatcgccggcttccccggc
ttcatcggcagcaggggcgagatgggggcccccgggagagagggcctgttcggggaggcc
ggccccacgggagacttcggcgacatcggagacacaatcaacctacccggagcccccggc
ctcaagggggagcgcggcggcacggggataccaggccggaaggggttcttcggagagaag
ggcgccatcggcgacatcggcttcccggggatcaccggcatgacgggtgcccagggcccc
cccgggctgcacggacagacaggatttccggggctcacgggcctcacggggctgcaggga
gagcccggacgggttggggtgccaggtgacaaaggcgattttggctggcctggggccccc
ggcttaccagggtttccgggcgcccgaggcatcgggggactcaacggcttacccggcacc
aaaggctccccaggatccccagggcccgatggccacggagaccccggcttccctggtcct
gtcggggagagaggggaacccggagagcccaacacctttcccggaccccccggagccccg
ggtcagaagggggagcgcggagtgccaggggagcgcggcccagcggggagccccgggctc
cggggctttccaggcgtcacgcccccgtccaacatctcggggtctcccggcgacgtgggg
gtgccgggcatcttcggcatgcaaggctaccagggccccccgggcccccccggccccgcc
gcccgtcccgggagcaaaggcgaggacggcccccccggcccccccggcagccccggcagc
aaaggctggggcggagacccagggccgcagggccggcccggcgtgttcggcctccccgga
gagaaaggcccccgcggcgagccgggcttcatggggaacacgggcgccacgggcagcgtg
ggggaccgcggccccaagggccccaagggggaccgcggacggcctgggccacccgggtcc
atggggtcccccgggattgcgggcgtcccccagaggatcgccacacagccagggcccatg
ggtccccagggcaggcgaggacccccaggggcacagggcgaggcggggccgcagggcccc
ccaggagacccagggttccgaggggctcccggcaaggctggtgtgcagggccgaggcggc
gtgtcggctatgccaggattccgcggtgaccccgggcccatgggcaaccagggccctatc
ggccaggaaggagagcccggccgccccgggagccccggcctgcccggcctgccaggccgc
agcgtgagcatcggctacctgctggtgaagcacagccagacggagcaggagcccatgtgt
ccggccggcatgaccaagctgtggggcggctacagcctgttgtacttcgagggccaggag
aaggcccacaaccaggacctgggcctggccggctcctgcctggcccgcttcagcaccatg
cccttcctgtactgcaacccgggcgacgtctgctactacgccagccgcaacgacaagtcc
tactggctgtccaccacggccccgctgcccatgatgcccgtcgctgaggaggagatcaag
ccctacatcagccgctgctccgtgtgcgaggccccggccgtggccattgccgtgcacagc
caggacgtgtccatcccgcactgcccggccggctggcgcagcctgtggattgggtactcc
ttcctcatgcacacagccgccggggacgaggggggcggccagtcgctggtgtcaccgggc
agctgcctggaggacttccgtgccacgcccttcatcgagtgcaacgggggccgaggcacg
tgccactactacgccaacaagtacagcttctggctgaccaccatcgccgagcagagcttc
caggcctcaccctcgccggacacgctcaaggcggggctcatccgcacgcacatcagccgc
tgccaggtctgcatgaagaacctgtga
DBGET
integrated database retrieval system
