Sorex araneus (European shrew): 101552244 Help Entry 101552244         CDS       T07854                                  Symbol COL4A1 Name (RefSeq) collagen alpha-1(IV) chain   KO K06237   collagen type IV alpha Organism sara  Sorex araneus (European shrew) Pathway sara04151   PI3K-Akt signaling pathway sara04382   Cornified envelope formation sara04510   Focal adhesion sara04512   ECM-receptor interaction sara04820   Cytoskeleton in muscle cells sara04926   Relaxin signaling pathway sara04933   AGE-RAGE signaling pathway in diabetic complications sara04974   Protein digestion and absorption sara05146   Amoebiasis sara05165   Human papillomavirus infection sara05200   Pathways in cancer sara05222   Small cell lung cancer Brite KEGG Orthology (KO) [BR:sara00001]  09130 Environmental Information Processing   09132 Signal transduction    04151 PI3K-Akt signaling pathway     101552244 (COL4A1)   09133 Signaling molecules and interaction    04512 ECM-receptor interaction     101552244 (COL4A1)  09140 Cellular Processes   09144 Cellular community - eukaryotes    04510 Focal adhesion     101552244 (COL4A1)   09142 Cell motility    04820 Cytoskeleton in muscle cells     101552244 (COL4A1)  09150 Organismal Systems   09152 Endocrine system    04926 Relaxin signaling pathway     101552244 (COL4A1)   09154 Digestive system    04974 Protein digestion and absorption     101552244 (COL4A1)   09158 Development and regeneration    04382 Cornified envelope formation     101552244 (COL4A1)  09160 Human Diseases   09161 Cancer: overview    05200 Pathways in cancer     101552244 (COL4A1)   09162 Cancer: specific types    05222 Small cell lung cancer     101552244 (COL4A1)   09172 Infectious disease: viral    05165 Human papillomavirus infection     101552244 (COL4A1)   09174 Infectious disease: parasitic    05146 Amoebiasis     101552244 (COL4A1)   09167 Endocrine and metabolic disease    04933 AGE-RAGE signaling pathway in diabetic complications     101552244 (COL4A1)  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    04147 Exosome [BR:sara04147]     101552244 (COL4A1)    00536 Glycosaminoglycan binding proteins [BR:sara00536]     101552244 (COL4A1) Exosome [BR:sara04147]  Exosomal proteins   Exosomal proteins of other cancer cells    101552244 (COL4A1) Glycosaminoglycan binding proteins [BR:sara00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    101552244 (COL4A1) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  Collagen C4 Motif Other DBs NCBI-GeneID:  101552244 NCBI-ProteinID:  XP_012791138 LinkDB All DBs Position Unknown AA seq 1557 aa AA seqDB search MPKIPQKLGQEGGGGCAGSGCGKCDCHGVKGQKGERGLPGLQGVIGFPGMQGPEGPAGPP GQKGDPGEPGLPGTKGTRGPPGVAGFPGNPGLPGIPGQDGPPGPPGIPGCNGTKGERGPL GPPGLPGFMGNPGPPGLPGMKGDPGEILGHIPGMLLKGERGFPGPPGVPGSPGLPGLQGP IGPPGFQGAPASRDEPPSGLQGQMGLSFQGPKGEKGDQGVSGPPGVPGQAQVKEKGETAT KGEKGEKGEPGFQGMPGFGEKGEPGKPGPRGKPGKDGEKGERGFPLEEGTQLAEAWEHLL GAGPLRAQRLAGGSPYGIVECQPGPQGDRGPPGTPGQPGLSGEVGEKGQKGEGCLTCDLM GLRGPPGPQGPPGEIGFPGQPGAKGDRGQPGRNGLEGLPGPQGVPGLMGQPGAKGEPGEI YLDMRLKGDKGDPGFPGQPGMPGRAGTPGRDGQPGLPGPKGSPGSIGLKGERGPPGGVGF PGSRGDTGPPGPPGFGPMGPVGDKGQAGFPGNPGAPGLPGPKGEAGQVVPMPGPPGAEGR PGSPGFQGPQGDRGFPGTPGRPGLPGEKGAVGQPGIGFPGPPGPKGVDGLPGEAGPPGSP GRQGFNGLPGSPGLPGQKGEPGVGQPGLKGQPGLPGTPGTPGEKGSIGGPGVPGEHGAIG PPGLQGVRGDPGPPGLPGPQGAPGLPGMGPPGVMGPPGGQGPPGSAGPPGLKGEKGFPGF PGLDMPGPKGDKGSQGLPGLTGQLGPPGLPGQQGTPGLPGYPGPKGEMGVMGTPGQPGLP GTAGSPGLPGLKGDLGLPGSSGPRGEPGFKGDKGDAGLPGLPGSMDKVDMDTMKGQKGDQ GEKGQIGPTGEKGSRGDPGTPGVPGKDGQAGQPGQPGPKGDPGIGGSPGAPGLPGPKGSV GGMGMPGAPGVKGLPGIPGPQGMPGVPGEKGTKGEKGQAGLPGIGIPGRPGDKGDQGLAG FPGSPGEKGEKGSIGVPGMPGSPGPKGSPGSAGHPGSPGPPGEKGDKGLPGLDGVPGVKG EAGVPGRPGPTGPAGQKGEPGSDGFPGSAGEKGEPGRGPAGSPGPSGPEACSGGSKGEVG VPGLSGSPGIPGTKGEPGFVGPPGPQGQPGLPGAPGHTMPGPKGDRGPQGQPGLPGMPGP MGPPGLPGLDGLKGDRGNPGWPGTPGAPGPKGDPGFQGMPGIGGAPGLTGSKGDVGPPGV PGFQGQKGLPGLQGVKGDPGDQGYPGAKGLPGPPGPPGPYDIIKGEPGLPGPEGPAGLKG LQGPPGPKGQQGVTGSTGLPGPPGAPGFDGAPGQKGETGPFGPMGPRGFPGPPGPDGLPG SMGPPGTPSVDHGFLVTRHSQTVDDPQCPPGTKVLYHGYSLLYVQGNERAHGQDLGTAGS CLRKFSTMPFLFCNINNVCNFASRNDYSYWLSTPEPMPMSMAPVTGDAIRPFISRCAVCE APAMVMAVHSQTIQIPQCPNGWSSLWIGYSFVMHTSAGAEGSGQALASPGSCLEEFRSAP FIECHGRGTCNYYANAYSFWLATVERSEMFKKPTPSTLKAGELRTHVSRCQVCMRRT NT seq 4674 nt NT seq  +upstreamnt  +downstreamnt atgccgaagattccccagaagctcgggcaggaaggcggcggaggctgtgccggctctggc tgtgggaaatgcgactgccacggagtgaagggacagaagggtgagaggggactccccgga ttacaaggtgtcatcggctttcccggcatgcaaggacccgagggaccggcgggaccccca ggacaaaagggcgatcccggagaaccaggacttcccggaaccaaaggaaccagaggcccc cctggagtggctggcttcccaggaaacccaggcctcccgggtatccccggccaagacggc cccccggggcccccaggaatcccaggctgcaacggaacgaagggtgaacgcgggccgctg ggcccccccggcctgcccggattcatgggcaacccgggaccccccgggctccccggaatg aagggagaccctggagagatcctgggccatatccccgggatgctgctgaagggggagcga ggctttcccggccccccaggagtaccgggttctccagggttaccaggcctgcagggaccc atcggcccccccggattccaaggagcccccgccagccgtgacgagcctccctctggccta cagggacagatgggcctcagcttccagggcccgaaaggcgagaagggggaccagggggtg agtgggcctcccggggtcccgggacaggcgcaggtgaaggagaaaggcgagacggccacc aagggcgagaagggagagaaaggcgagcccggcttccaggggatgccgggcttcggggag aaaggagaacccggaaaaccagggccccgaggcaagcccgggaaagacggcgagaaggga gagcgagggtttccgctggaggagggcacccaactcgcagaggcttgggagcaccttctg ggcgccgggcccctgagggcccagcggcttgcggggggcagcccatatggaatcgtggaa tgccagcctggaccgcagggcgaccggggcccccccgggaccccaggacagccggggctg agtggtgaagtcggagagaagggtcagaagggagaaggctgcctcacctgcgacctcatg gggctgcgaggcccccctgggccacagggacccccgggagaaatcgggttcccgggacag ccaggcgccaagggtgaccgcggacagcctggccggaatggtctggagggcctgccggga ccccaaggtgtgccggggctgatgggccagccaggagccaagggcgagcccggcgagatc tacctggacatgcggctcaagggcgacaagggagaccccggcttccccggacagcccggc atgccggggagagccggcacccccgggagagacggccagccggggctgcccggccccaaa ggctccccgggctcaataggactgaaaggagagcgtgggccccccggaggcgtggggttc cccggcagccgtggcgacactggccccccgggacccccagggtttggccccatgggcccc gttggtgacaaaggacaagctggctttccagggaaccctggagcccccgggctgccaggc cccaagggcgaggcgggccaggtcgtccccatgcccgggccccctggagcagaaggccgt cccggctcgcccggcttccaaggaccccaaggtgaccggggcttccctggaacccccgga agacccggcctccccggagagaaaggtgccgtgggccagcctggcattggcttcccaggg cccccggggcccaaaggtgtggacggcttgcctggagaggccgggccccccgggagccct ggccgccagggcttcaacggcctacctgggagccccggcctgccaggccagaagggggag cccggggtggggcagccaggcctgaagggacagcccggcctccccggcacccctggcacg cccggagagaaggggagcatcgggggacccggcgtccccggcgagcacggagccatcggc ccccccggcctgcagggcgtccgaggtgaccccgggcctcccggcttgccgggtccccag ggtgctcccggactccccggaatgggcccccctggagtgatgggcccccctggaggacaa ggacccccgggctccgcaggcccccccggactgaaaggagagaaaggcttccctggcttc cccgggctcgacatgcccggccccaagggagataaaggctcccaggggctgcccggcctc acgggccagctggggccgcccggccttcctggacagcagggcacgcccggtctccccggc tacccaggccccaaaggagagatgggcgtcatgggcacccctggacagcctggccttccc ggcacagcgggcagcccagggctgccgggcctgaagggggacctgggcctgcctggctcc tccgggccccggggcgagcctggcttcaaaggcgacaaaggcgacgctggcctccccggc ctccctggctccatggacaaagtggacatggacaccatgaagggacagaagggcgaccag ggcgagaaaggacaaatcggacccaccggcgagaaggggtcccggggagaccctggcacc ccaggagtcccagggaaggacggccaggccgggcagccgggccagccaggacctaaaggc gaccctggtattggtggcagtcccggggctccagggctgcctggccccaaagggtcagtt ggtggaatgggcatgccaggagcgcccggcgtgaaggggctgcccgggatccccggccct cagggcatgcccggcgtgcccggcgagaagggcaccaagggcgagaagggccaggcgggg ctgcccggcatcggcattcctgggcggcctggagacaagggagaccagggcctggcgggc ttcccggggagccctggtgagaagggcgagaagggcagcatcggggtcccggggatgcct ggctcccccgggcccaagggctctcccggcagcgccggccacccagggagcccggggccg cccggagagaagggagacaagggcctcccgggcctggacggcgtccccggcgtgaaggga gaagcaggtgtccctggacggcccggccccacaggtcccgcgggccagaagggcgagccg ggcagtgatggatttccggggtcagcaggagagaagggcgagccaggtagggggcctgcg ggcagccctgggccttctgggcctgaggcgtgttctgggggttccaaaggtgaagtcggc gtccccggcctgtccgggagccccgggatccctgggaccaagggcgagccggggttcgtg ggcccgcccggcccccaggggcagccaggcttgcccggagcgccaggccacaccatgccg ggccccaagggcgaccggggcccccagggccagcccggactgccaggcatgcccggcccc atgggtccccccggcctgcccgggctggacggcctgaaaggggacagaggaaacccaggc tggccggggacccccggcgcccccggccccaaaggagaccccgggttccagggcatgccg ggcatcggcggagctccagggctgaccggctccaagggggacgtcgggcctcccggtgtc ccggggttccaaggtcagaaggggctgcccggcctgcagggagtgaagggcgaccccgga gatcaaggctaccctggcgccaaaggtctccccggcccccccggcccccccggcccctac gacatcatcaagggggagcccggcctccctggccctgagggtcctgccggcctgaaaggg ctccagggtcctcccggccccaaaggacagcaaggtgtgaccggctccactggcttgccc ggacctccaggcgctcccggcttcgatggtgcccccggccagaaaggagagaccggcccg tttgggccgatgggtcctcgaggctttccgggcccaccaggccccgacgggctgccgggc tccatgggccccccagggaccccgtcggtggaccacggcttcctggtgaccagacacagt cagaccgtggacgacccgcagtgtccgccgggcaccaaggtcctgtaccacggctactcc ctgctctacgtgcagggcaacgagcgggcacacggccaggacctgggcacggccggcagc tgcctgcgtaagttcagcaccatgcccttcctcttctgcaacatcaacaacgtctgcaac ttcgcctcgcgcaacgactactcctactggctgtccacgcccgagcccatgcccatgtcc atggcgcccgtcaccggggacgccatccggcccttcatcagcaggtgtgcggtgtgtgag gcgccggccatggtgatggcggtgcacagccagaccatccagatcccacagtgccccaac ggctggtcgtcgctctggatcggctactccttcgtcatgcacaccagcgcgggcgccgag ggctccggccaggccctggcgtcgcccggctcctgcctagaggagttccgcagtgctccc ttcatcgagtgccacggccgaggcacctgcaactactacgccaacgcttacagcttctgg ctcgccactgtcgagcggagcgagatgttcaagaagcccacgccgtccacgctgaaggcc ggggagctgcgcacgcacgtgagccgctgccaagtgtgcatgaggaggacttag

DBGET integrated database retrieval system