Sorex araneus (European shrew): 101552647
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Entry
101552647 CDS
T07854
Symbol
CDK5RAP1
Name
(RefSeq) CDK5 regulatory subunit-associated protein 1
KO
K06168
tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:
2.8.4.3
]
Organism
sara
Sorex araneus (European shrew)
Brite
KEGG Orthology (KO) [BR:
sara00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sara03016
]
101552647 (CDK5RAP1)
Enzymes [BR:
sara01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.3 tRNA-2-methylthio-N6-dimethylallyladenosine synthase
101552647 (CDK5RAP1)
Transfer RNA biogenesis [BR:
sara03016
]
Eukaryotic type
tRNA modification factors
Methylthiotransferase
101552647 (CDK5RAP1)
Prokaryotic type
Methylthiotransferases
101552647 (CDK5RAP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM
Angiomotin_C
Fer4_12
Motif
Other DBs
NCBI-GeneID:
101552647
NCBI-ProteinID:
XP_012789095
LinkDB
All DBs
Position
Unknown
AA seq
477 aa
AA seq
DB search
MDELLGKQRKVYLETYGCQMNVNDTEIAWSILQKSGYLRTSNLQEADVILLVTCSIREKA
EQTIWNRLKQLKVLKTKRPRSQGPLRIGILGCMAERLKEELLNRERMVDILAGPDAYRDL
PRLLAVAESGQQAANVLLSLDETYADVMPVQTSPSATSAFVSIMRGCNNMCSYCIVPFTR
GRERSRPVASILEEVRKLSEQGVKEVTLLGQNVNSFQDNSEIQFNNTVSANLSRGFSANY
KIKQGGLRFAYLLDQVSRVDPEMRIRFTSPHPKDFPDEVLQLIHERDNICKQIHLPAQSG
SSRVLEAMRRGYSREAYMELIDHIRDSIPGVSLSSDFIAGFCGEMEEDHLQTVSLLREVQ
YNTGFLFAYSMRQTRAYHRLKDDVPEEVKLRRLEELITVFREEATKANKTAVGCTQLVLV
EGVSKRSATDLCGRNDGNLKVIFSDVEIEDSTNPGIRVRAQPGDYVLVKVSGIPFLD
NT seq
1434 nt
NT seq
+upstream
nt +downstream
nt
atggatgaacttttaggaaaacagagaaaagtctaccttgagacctatggctgccagatg
aatgtgaatgacacagagatagcatggtccatcttacagaagagtggctacctgcgaacc
agtaatctccaagaggctgatgtgatcctccttgtcacatgttcaatcagggagaaggct
gaacaaaccatctggaatcgtttgaaacagcttaaagtcctgaagacaaagcggcctcgt
tcccaaggacctctcaggattgggattctaggctgcatggctgagagactgaaggaggag
ctcctcaacagagagagaatggtggatattttggctggtccagatgcctaccgtgacctg
cctcgcttgttggctgttgctgagtcaggccagcaagctgccaatgttctgctttctctg
gatgagacctatgctgatgtcatgccagttcagacgagccccagcgctacttctgccttt
gtttctatcatgcgaggctgtaacaacatgtgcagctattgtattgttcctttcacacgt
ggtcgagagaggagtaggcctgttgcttccattctagaggaagtgaggaagctttctgag
cagggagtgaaagaagtgacacttcttggacagaatgttaatagctttcaggacaattca
gagatccagttcaacaatacagtctccgccaacctcagccgtggtttctccgccaactat
aaaatcaagcaagggggacttcgttttgcttaccttctggatcaggtctccagagtagat
cctgaaatgaggatccgttttacctctccccaccctaaggactttcctgatgaggtcctg
cagctgattcatgagagagacaatatctgtaaacagatccatctgccggcccagagtgga
agcagtcgtgtgttggaggccatgaggcggggatattcaagggaagcatacatggaattg
attgatcatatcagagactcgataccaggtgtgagcctcagtagtgatttcattgctggc
ttttgtggtgagatggaggaagaccatctccagacagtgtctttgcttcgagaagttcaa
tacaacacaggctttctctttgcctacagcatgagacagacacgggcatatcataggttg
aaggatgatgttccagaagaggtcaaattaaggcgtttagaagaacttattactgtcttc
cgggaagaagctacaaaagccaacaagactgctgtgggttgtacccaactggtgctggtg
gaaggggtcagtaaacgctctgccactgacttgtgtggccggaatgatggaaatcttaag
gtgatcttctctgatgtagagatagaagattccactaaccctgggatcagggtcagagct
cagcctggggactatgtattggtgaaggtttctgggatccctttcctggattag
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